© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1321 |
| Gene name | |
| Location | Contig_132:10749..11497 |
| Strand | - |
| Gene length (bp) | 748 |
| Transcript length (bp) | 588 |
| Coding sequence length (bp) | 588 |
| Protein length (aa) | 196 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08432 | Vfa1 | AAA-ATPase Vps4-associated protein 1 | 2.8E-53 | 7 | 190 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9C0V9|YNH1_SCHPO | UPF0589 protein C32H8.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC32H8.01c PE=3 SV=1 | 1 | 69 | 2.0E-13 |
| sp|P40080|VFA1_YEAST | VPS4-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VFA1 PE=1 SV=1 | 7 | 189 | 9.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1321 MAPPFPNIYTHRKVADAAAKSCDICYKPSTSVLITPDQKDFFYVCTIHLKDTHFCTPKIDHEAIKAKRERELAAE VELVKKEYEERLRRNKEKEANLEKNRGKEHDKEPDKDEDKDKKEEKEKNKMTADEKEPGQEIKTEATAPDEEESR VFELKSAFYQQRLGRKRQLEAAKKDRERASQSNYFPSVPNNLPGK* |
| Coding | >OphauB2|1321 ATGGCGCCTCCTTTTCCAAACATTTACACACATCGCAAGGTGGCAGATGCTGCAGCCAAGTCATGCGACATCTGC TATAAGCCCAGCACGTCGGTGCTCATTACGCCAGATCAAAAGGACTTCTTTTATGTCTGCACCATTCACCTCAAA GATACTCACTTTTGCACTCCAAAAATTGATCATGAAGCTATCAAGGCGAAACGGGAGCGGGAGCTGGCAGCCGAG GTGGAATTGGTGAAGAAGGAATACGAAGAACGGCTGCGTCGCAACAAGGAAAAAGAGGCCAACTTGGAAAAGAAC CGAGGCAAAGAACATGACAAGGAACCGGACAAGGACGAAGACAAGGACAAGAAAGAGGAAAAGGAAAAGAATAAA ATGACTGCAGACGAAAAAGAGCCCGGCCAAGAGATCAAGACAGAGGCCACGGCGCCTGATGAAGAAGAGTCCAGA GTCTTTGAGCTCAAGAGCGCATTCTATCAGCAGCGACTTGGTAGAAAACGTCAGCTTGAAGCTGCCAAGAAAGAT CGGGAAAGAGCTTCACAGTCCAACTACTTTCCCTCTGTTCCAAACAACTTGCCGGGTAAGTGA |
| Transcript | >OphauB2|1321 ATGGCGCCTCCTTTTCCAAACATTTACACACATCGCAAGGTGGCAGATGCTGCAGCCAAGTCATGCGACATCTGC TATAAGCCCAGCACGTCGGTGCTCATTACGCCAGATCAAAAGGACTTCTTTTATGTCTGCACCATTCACCTCAAA GATACTCACTTTTGCACTCCAAAAATTGATCATGAAGCTATCAAGGCGAAACGGGAGCGGGAGCTGGCAGCCGAG GTGGAATTGGTGAAGAAGGAATACGAAGAACGGCTGCGTCGCAACAAGGAAAAAGAGGCCAACTTGGAAAAGAAC CGAGGCAAAGAACATGACAAGGAACCGGACAAGGACGAAGACAAGGACAAGAAAGAGGAAAAGGAAAAGAATAAA ATGACTGCAGACGAAAAAGAGCCCGGCCAAGAGATCAAGACAGAGGCCACGGCGCCTGATGAAGAAGAGTCCAGA GTCTTTGAGCTCAAGAGCGCATTCTATCAGCAGCGACTTGGTAGAAAACGTCAGCTTGAAGCTGCCAAGAAAGAT CGGGAAAGAGCTTCACAGTCCAACTACTTTCCCTCTGTTCCAAACAACTTGCCGGGTAAGTGA |
| Gene | >OphauB2|1321 ATGGCGCCTCCTTTTCCAAACATTTACACACATCGCAAGGTGGCAGATGCTGCAGCCAAGTCATGCGACATCTGC TATAAGCCCAGCACGTCGGTGCTCATTACGCCAGATCAAAAGGTGTCTTGCCATGAGCAACAGACAGGTCCAAGC AAAAGGCTGACGCATTTCGAGGACTTCTTTTATGTCTGCACCATTCACCTCAAAGATACTCACTTTTGCACTCCA AAAATTGATCATGAAGCTATCAAGGCGAAACGGGAGCGGGAGCTGGCAGCCGAGGTGGAATTGGTGAAGAAGGAA TACGAAGAACGGCTGCGTCGCAACAAGGAAAAAGAGGCCAACTTGGAAAAGAACCGAGGCAAAGAACATGACAAG GAACCGGACAAGGACGAAGACAAGGACAAGAAAGAGGAAAAGGAAAAGAATAAAATGACTGCAGACGAAAAAGAG CCCGGCCAAGAGGTCTGTCATTGCCGCTTCTTTCAAATCGCGTTACTCAGACGTCACAGATCAAGACAGAGGCCA CGGCGCCTGATGAAGAAGAGTCCAGAGTCTTTGAGCTCAAGAGGTTGGAGCTGTCAACCCAAGCTTGGCCCTGGC AAGACGACGGGCTGACCAAGGACACAGCGCATTCTATCAGCAGCGACTTGGTAGAAAACGTCAGCTTGAAGCTGC CAAGAAAGATCGGGAAAGAGCTTCACAGTCCAACTACTTTCCCTCTGTTCCAAACAACTTGCCGGGTAAGTGA |