© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1304 |
| Gene name | |
| Location | Contig_131:20837..23247 |
| Strand | - |
| Gene length (bp) | 2410 |
| Transcript length (bp) | 2271 |
| Coding sequence length (bp) | 2271 |
| Protein length (aa) | 757 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04082 | Fungal_trans | Fungal specific transcription factor domain | 7.7E-07 | 221 | 363 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08638|LEUR_YEAST | Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1 | 42 | 645 | 2.0E-38 |
| sp|Q59UY7|SEF1_CANAL | Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 | 16 | 664 | 9.0E-18 |
| sp|Q74Z37|SEF1_ASHGO | Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 | 205 | 549 | 1.0E-15 |
| sp|P87164|SEF1_KLULA | Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3 | 205 | 460 | 5.0E-14 |
| sp|P34228|SEF1_YEAST | Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 | 205 | 655 | 7.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003677 | DNA binding | Yes |
| GO:0006351 | transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0046872 | metal ion binding | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0043167 | ion binding | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0009059 | macromolecule biosynthetic process | No |
| GO:0005488 | binding | No |
| GO:0008150 | biological_process | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0008152 | metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0009058 | biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0097659 | nucleic acid-templated transcription | No |
| GO:0009987 | cellular process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0032774 | RNA biosynthetic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0043169 | cation binding | No |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 6 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 1428 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1304 MDGSSIVARGASSVSPTSPTSSRHGNGAPKRKRSTGMPGPESSPGSIMDEDHGDHGDHDRKRQPGVKRACNECRQ QKVVYKSPLPLRCDVVQDPFQSCSRCNRLKLECKIESNFKRIGKRSKHAEMEREIERLRRKVARAKSQGFLSQDD EHADGSTLSTHGNASSSLEHVSHGSMMGSDEAVSSLLNLKTGGNFAMQPQYSHQLENVRLNDSQVAHLFNEFFYR YHPFLPFLNPEQPPEIYKQQHPLLFWSMIAVAARRFTRSSDCRNLLDQLSGPLTRYLWTTIGEVPSNYHVVKALC LLCTWPLPTSTTTSDPTHILCGVMMKTATGVGLHRPNHIRDFSRVSVDLDADQLRDRITTWAVCNIVAQTIGTGY GQPASTLYDWTLAMKPSDSEQRSSMHLSAELEARLQIERFCDKVSKEMYSNASDPRGVAGDEHRAILLRVFRRDY GELHASIMSQTWPNCVVSLHLRAAGLHMRLAGLFDSSKTPGYLDDLMGLWRAATSFLDEFLQVGRTTFPRDGMSG SLLPYATNYLQQMLVAAAFTLLKLMKSFLYNTIDFERGRSLFHHAIRAIRATSVVNNDLQWRLAELMVQMWNGAR LEHRNRSIKSEEDAPIQIDDSLQLKVRCRHSMSLVFDSVWRWREEFQAQGRGSLENTKHPTNPDSANDSSAASSQ MDSSLMAPDVPSAANSMVNMNGALTSTNNAAIAPTASAPNSMIGASMAYGDANYELFDPQNWMLDGLIDFNYNMI TPLEGT* |
| Coding | >OphauB2|1304 ATGGACGGCTCCTCTATTGTCGCCCGTGGGGCCTCGTCGGTCAGCCCGACCAGTCCAACCAGCTCTCGCCATGGA AACGGCGCCCCAAAACGCAAGAGGAGCACTGGCATGCCTGGCCCTGAGAGCAGCCCTGGCAGCATCATGGATGAG GATCATGGCGACCACGGCGACCACGATCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAATGCCGCCAG CAAAAGGTTGTTTACAAGTCGCCTCTGCCATTGCGCTGCGATGTCGTCCAAGATCCCTTTCAGAGCTGCTCCCGC TGCAACCGGCTCAAACTCGAGTGCAAAATCGAGTCCAATTTCAAGCGCATAGGAAAGCGGTCCAAGCACGCCGAG ATGGAACGCGAGATTGAGAGGCTGCGTCGCAAGGTAGCCCGCGCCAAGTCGCAGGGCTTCCTATCCCAAGACGAC GAACACGCCGATGGCTCTACTCTCTCCACCCATGGCAATGCGTCGTCGAGCCTCGAGCACGTCAGCCATGGCTCC ATGATGGGCTCGGATGAAGCTGTATCCTCACTGCTCAACCTGAAGACGGGTGGCAACTTTGCCATGCAGCCGCAG TATTCACATCAACTCGAAAATGTGCGCCTAAACGACTCTCAAGTCGCCCACCTGTTCAACGAGTTCTTCTATAGA TACCATCCCTTTCTCCCTTTTCTCAATCCCGAACAGCCGCCAGAAATATACAAGCAGCAACATCCCTTGCTCTTC TGGTCCATGATTGCAGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGCCGCAATCTGCTCGACCAATTGTCA GGCCCCCTGACGCGCTACCTGTGGACCACGATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGTGT CTTCTCTGCACCTGGCCGCTGCCCACGAGCACCACCACGTCGGACCCAACACACATTCTCTGCGGCGTCATGATG AAGACGGCTACGGGCGTCGGCCTGCATCGCCCAAACCACATACGCGACTTTTCGCGCGTCTCGGTTGATCTCGAC GCCGACCAGCTGCGCGATCGCATCACCACCTGGGCCGTTTGCAACATTGTGGCCCAAACCATTGGCACCGGCTAC GGCCAGCCAGCGTCGACTCTATACGACTGGACCTTGGCCATGAAGCCGTCCGACTCGGAACAGCGCTCCTCGATG CATCTTTCCGCCGAGTTGGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTCTCCAAGGAAATGTACAGC AACGCCAGCGATCCACGCGGTGTCGCGGGCGACGAACACCGCGCCATTCTCCTCCGGGTCTTTCGGCGAGACTAC GGCGAGCTGCACGCCTCCATCATGTCTCAGACATGGCCCAATTGCGTTGTGAGCTTGCATCTGCGCGCCGCTGGC CTTCACATGCGTCTGGCCGGCCTCTTTGATTCTAGCAAGACGCCGGGATACTTGGACGACCTCATGGGCCTCTGG CGGGCTGCCACCAGCTTCCTCGATGAGTTCCTCCAAGTTGGCAGGACAACCTTTCCCAGAGATGGCATGAGCGGC AGCCTCCTTCCATATGCCACCAATTACCTGCAGCAGATGCTTGTTGCCGCTGCTTTTACTCTGCTTAAACTCATG AAGTCTTTTCTCTACAACACCATTGACTTTGAGCGGGGACGCAGCCTGTTCCACCACGCCATTCGCGCCATTCGC GCCACGAGTGTCGTAAACAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTACAGATGTGGAATGGAGCCAGA CTGGAGCATCGCAATCGTAGCATCAAATCTGAGGAGGATGCGCCTATACAGATTGACGACAGCCTACAGCTCAAG GTTCGCTGTCGCCACAGCATGAGCCTCGTTTTTGACTCGGTGTGGCGCTGGCGGGAAGAATTTCAGGCCCAAGGA AGGGGCTCTCTTGAGAACACGAAGCACCCCACCAATCCCGACTCAGCTAATGACTCTTCGGCAGCCTCGTCTCAA ATGGACAGTTCTCTCATGGCGCCTGACGTGCCTTCTGCTGCCAACAGCATGGTCAACATGAACGGCGCCCTCACC TCGACAAATAATGCTGCAATTGCACCCACAGCTTCTGCGCCAAACAGCATGATTGGTGCTTCCATGGCCTATGGC GACGCCAATTACGAGCTGTTTGATCCTCAGAACTGGATGCTCGACGGGCTCATTGACTTCAACTACAACATGATT ACTCCATTGGAAGGGACATAA |
| Transcript | >OphauB2|1304 ATGGACGGCTCCTCTATTGTCGCCCGTGGGGCCTCGTCGGTCAGCCCGACCAGTCCAACCAGCTCTCGCCATGGA AACGGCGCCCCAAAACGCAAGAGGAGCACTGGCATGCCTGGCCCTGAGAGCAGCCCTGGCAGCATCATGGATGAG GATCATGGCGACCACGGCGACCACGATCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAATGCCGCCAG CAAAAGGTTGTTTACAAGTCGCCTCTGCCATTGCGCTGCGATGTCGTCCAAGATCCCTTTCAGAGCTGCTCCCGC TGCAACCGGCTCAAACTCGAGTGCAAAATCGAGTCCAATTTCAAGCGCATAGGAAAGCGGTCCAAGCACGCCGAG ATGGAACGCGAGATTGAGAGGCTGCGTCGCAAGGTAGCCCGCGCCAAGTCGCAGGGCTTCCTATCCCAAGACGAC GAACACGCCGATGGCTCTACTCTCTCCACCCATGGCAATGCGTCGTCGAGCCTCGAGCACGTCAGCCATGGCTCC ATGATGGGCTCGGATGAAGCTGTATCCTCACTGCTCAACCTGAAGACGGGTGGCAACTTTGCCATGCAGCCGCAG TATTCACATCAACTCGAAAATGTGCGCCTAAACGACTCTCAAGTCGCCCACCTGTTCAACGAGTTCTTCTATAGA TACCATCCCTTTCTCCCTTTTCTCAATCCCGAACAGCCGCCAGAAATATACAAGCAGCAACATCCCTTGCTCTTC TGGTCCATGATTGCAGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGCCGCAATCTGCTCGACCAATTGTCA GGCCCCCTGACGCGCTACCTGTGGACCACGATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGTGT CTTCTCTGCACCTGGCCGCTGCCCACGAGCACCACCACGTCGGACCCAACACACATTCTCTGCGGCGTCATGATG AAGACGGCTACGGGCGTCGGCCTGCATCGCCCAAACCACATACGCGACTTTTCGCGCGTCTCGGTTGATCTCGAC GCCGACCAGCTGCGCGATCGCATCACCACCTGGGCCGTTTGCAACATTGTGGCCCAAACCATTGGCACCGGCTAC GGCCAGCCAGCGTCGACTCTATACGACTGGACCTTGGCCATGAAGCCGTCCGACTCGGAACAGCGCTCCTCGATG CATCTTTCCGCCGAGTTGGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTCTCCAAGGAAATGTACAGC AACGCCAGCGATCCACGCGGTGTCGCGGGCGACGAACACCGCGCCATTCTCCTCCGGGTCTTTCGGCGAGACTAC GGCGAGCTGCACGCCTCCATCATGTCTCAGACATGGCCCAATTGCGTTGTGAGCTTGCATCTGCGCGCCGCTGGC CTTCACATGCGTCTGGCCGGCCTCTTTGATTCTAGCAAGACGCCGGGATACTTGGACGACCTCATGGGCCTCTGG CGGGCTGCCACCAGCTTCCTCGATGAGTTCCTCCAAGTTGGCAGGACAACCTTTCCCAGAGATGGCATGAGCGGC AGCCTCCTTCCATATGCCACCAATTACCTGCAGCAGATGCTTGTTGCCGCTGCTTTTACTCTGCTTAAACTCATG AAGTCTTTTCTCTACAACACCATTGACTTTGAGCGGGGACGCAGCCTGTTCCACCACGCCATTCGCGCCATTCGC GCCACGAGTGTCGTAAACAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTACAGATGTGGAATGGAGCCAGA CTGGAGCATCGCAATCGTAGCATCAAATCTGAGGAGGATGCGCCTATACAGATTGACGACAGCCTACAGCTCAAG GTTCGCTGTCGCCACAGCATGAGCCTCGTTTTTGACTCGGTGTGGCGCTGGCGGGAAGAATTTCAGGCCCAAGGA AGGGGCTCTCTTGAGAACACGAAGCACCCCACCAATCCCGACTCAGCTAATGACTCTTCGGCAGCCTCGTCTCAA ATGGACAGTTCTCTCATGGCGCCTGACGTGCCTTCTGCTGCCAACAGCATGGTCAACATGAACGGCGCCCTCACC TCGACAAATAATGCTGCAATTGCACCCACAGCTTCTGCGCCAAACAGCATGATTGGTGCTTCCATGGCCTATGGC GACGCCAATTACGAGCTGTTTGATCCTCAGAACTGGATGCTCGACGGGCTCATTGACTTCAACTACAACATGATT ACTCCATTGGAAGGGACATAA |
| Gene | >OphauB2|1304 ATGGACGGCTCCTCTATTGTCGCCCGTGGGGCCTCGTCGGTCAGCCCGACCAGTCCAACCAGCTCTCGCCATGGA AACGGCGCCCCAAAACGCAAGAGGAGCACTGGCATGCCTGGCCCTGAGAGCAGCCCTGGCAGCATCATGGATGAG GATCATGGCGACCACGGCGACCACGATCGCAAGCGCCAGCCCGGAGTCAAGCGCGCTTGCAACGAATGCCGCCAG CAAAAGGTTGTTTACAAGTCGCCTCTGCCAGTCCTTTCTTTTTTAGACTTTGGCCTCGGGCTTGCTCCTCTCTGC CCTGTCGCCTCGGCTGACCAATGCTCCTACAGTTGCGCTGCGATGTCGTCCAAGATCCCTTTCAGAGCTGCTCCC GCTGCAACCGGCTCAAACTCGAGTGCAAAATCGAGTCCAATTTCAAGCGCATAGGAAAGCGGTCCAAGCACGCCG AGATGGAACGCGAGATTGAGAGGCTGCGTCGCAAGGTAGCCCGCGCCAAGTCGCAGGGCTTCCTATCCCAAGACG ACGAACACGCCGATGGCTCTACTCTCTCCACCCATGGCAATGCGTCGTCGAGCCTCGAGCACGTCAGCCATGGCT CCATGATGGGCTCGGATGAAGCTGTATCCTCACTGCTCAACCTGAAGACGGGTGGCAACTTTGCCATGCAGCCGC AGTATTCACATCAACTCGAAAATGTGCGCCTAAACGACTCTCAAGTCGCCCACCTGTTCAACGAGTTCTTCTATA GATACCATCCCTTTCTCCCTTTTCTCAATCCCGAACAGCCGCCAGAAATATACAAGCAGCAACATCCCTTGCTCT TCTGGTCCATGATTGCAGTCGCCGCCCGTCGCTTCACCCGCTCCTCGGACTGCCGCAATCTGCTCGACCAATTGT CAGGCCCCCTGACGCGCTACCTGTGGACCACGATTGGCGAGGTGCCCAGCAACTACCATGTCGTCAAGGCCTTGT GTCTTCTCTGCACCTGGCCGCTGCCCACGAGCACCACCACGTCGGACCCAACACACATTCTCTGCGGCGTCATGA TGAAGACGGCTACGGGCGTCGGCCTGCATCGCCCAAACCACATACGCGACTTTTCGCGCGTCTCGGTTGATCTCG ACGCCGACCAGCTGCGCGATCGCATCACCACCTGGGCCGTTTGCAACATTGTGGCCCAAACCATTGGCACCGGCT ACGGCCAGCCAGCGTCGACTCTATACGACTGGACCTTGGCCATGAAGCCGTCCGACTCGGAACAGCGCTCCTCGA TGCATCTTTCCGCCGAGTTGGAGGCACGCCTGCAGATTGAGCGCTTCTGCGACAAGGTCTCCAAGGAAATGTACA GCAACGCCAGCGATCCACGCGGTGTCGCGGGCGACGAACACCGCGCCATTCTCCTCCGGGTCTTTCGGCGAGACT ACGGCGAGCTGCACGCCTCCATCATGTCTCAGACATGGCCCAATTGCGTTGTGAGCTTGCATCTGCGCGCCGCTG GCCTTCACATGCGTCTGGCCGGCCTCTTTGATTCTAGCAAGACGCCGGGATACTTGGACGACCTCATGGGCCTCT GGCGGGCTGCCACCAGCTTCCTCGATGAGTTCCTCCAAGTTGGCAGGACAACCTTTCCCAGAGATGGCATGAGCG GCAGCCTCCTTCCATATGCCACCAATTACCTGCAGCAGATGCTTGTTGCCGCTGCTTTTACTCTGCTTAAACTCA TGAAGTCTTTTCTCTACAACACCATTGACTTTGAGCGGGGACGCAGCCTGTTCCACCACGCCATTCGCGCCATTC GCGCCACGAGTGTCGTAAACAATGATTTGCAGTGGCGACTGGCCGAACTCATGGTACAGATGTGGAATGGAGCCA GACTGGAGCATCGCAATCGTAGCATCAAATCTGAGGAGGATGCGCCTATACAGATTGACGACAGCCTACAGCTCA AGGTTCGCTGTCGCCACAGCATGAGCCTCGTTTTTGACTCGGTGTGGCGCTGGCGGGAAGAATTTCAGGCCCAAG GAAGGGGCTCTCTTGAGAGTGAGTACAGCCTCTGGCTTGGCTTTGGCCAGCACAAGGCGGCTGATGGCATCATGA CACAGACACGAAGCACCCCACCAATCCCGACTCAGCTAATGACTCTTCGGCAGCCTCGTCTCAAATGGACAGTTC TCTCATGGCGCCTGACGTGCCTTCTGCTGCCAACAGCATGGTCAACATGAACGGCGCCCTCACCTCGACAAATAA TGCTGCAATTGCACCCACAGCTTCTGCGCCAAACAGCATGATTGGTGCTTCCATGGCCTATGGCGACGCCAATTA CGAGCTGTTTGATCCTCAGAACTGGATGCTCGACGGGCTCATTGACTTCAACTACAACATGATTACTCCATTGGA AGGGACATAA |