Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1280
Gene name
LocationContig_130:6339..7286
Strand-
Gene length (bp)947
Transcript length (bp)642
Coding sequence length (bp)642
Protein length (aa) 214

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12853 NADH_u_ox_C C-terminal of NADH-ubiquinone oxidoreductase 21 kDa subunit 1.3E-23 132 205
PF10785 NADH-u_ox-rdase NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit 5.5E-21 21 98

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q02854|NUXM_NEUCR NADH-ubiquinone oxidoreductase 20.9 kDa subunit OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo20.9 PE=1 SV=1 5 202 8.0E-77

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 76 94 18

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1280
MADASKQSQQTFVGTSKVVQTEFPLIDNDPHFKRVIKYARPSDYFVGLGMTAMGPTFMCAFEYFFPSGVGRGAYP
RILRLAGLVGVTGGFLCFYQRSISVGTLQIAESRELTFAQVRFYGMRENAREVEMDMREMVAKVKAGEPLYGKTS
LSPHLQGVAARQSRYSALKMGLLPWFNFVNHNQHGVDTAKYYQQAERELSMEDDKKSGVEAGS*
Coding >OphauB2|1280
ATGGCCGACGCAAGCAAACAAAGCCAGCAGACGTTTGTGGGCACGAGCAAGGTGGTGCAGACGGAGTTTCCGCTC
ATTGACAACGACCCCCACTTCAAGCGAGTCATCAAGTATGCTCGGCCATCAGACTACTTTGTTGGGCTTGGCATG
ACGGCGATGGGGCCGACCTTTATGTGTGCCTTTGAATATTTTTTTCCCTCGGGCGTTGGCAGAGGCGCCTATCCA
CGCATCCTACGCCTAGCCGGGCTCGTTGGCGTGACGGGGGGCTTTCTCTGTTTTTACCAGCGATCAATCTCTGTT
GGCACGCTGCAGATTGCCGAGTCTAGAGAGCTGACTTTTGCGCAAGTGCGATTCTACGGCATGCGAGAAAATGCG
CGCGAGGTGGAAATGGACATGCGTGAAATGGTGGCCAAGGTCAAGGCTGGCGAGCCCTTGTATGGAAAGACGTCA
TTATCACCGCATCTGCAGGGTGTGGCGGCGCGACAAAGCCGCTACTCGGCGCTCAAGATGGGCCTGCTCCCTTGG
TTTAATTTTGTCAATCATAACCAGCATGGCGTGGATACGGCAAAGTATTATCAGCAAGCTGAGCGGGAACTGTCC
ATGGAGGATGATAAGAAGTCTGGAGTAGAGGCCGGGAGCTAA
Transcript >OphauB2|1280
ATGGCCGACGCAAGCAAACAAAGCCAGCAGACGTTTGTGGGCACGAGCAAGGTGGTGCAGACGGAGTTTCCGCTC
ATTGACAACGACCCCCACTTCAAGCGAGTCATCAAGTATGCTCGGCCATCAGACTACTTTGTTGGGCTTGGCATG
ACGGCGATGGGGCCGACCTTTATGTGTGCCTTTGAATATTTTTTTCCCTCGGGCGTTGGCAGAGGCGCCTATCCA
CGCATCCTACGCCTAGCCGGGCTCGTTGGCGTGACGGGGGGCTTTCTCTGTTTTTACCAGCGATCAATCTCTGTT
GGCACGCTGCAGATTGCCGAGTCTAGAGAGCTGACTTTTGCGCAAGTGCGATTCTACGGCATGCGAGAAAATGCG
CGCGAGGTGGAAATGGACATGCGTGAAATGGTGGCCAAGGTCAAGGCTGGCGAGCCCTTGTATGGAAAGACGTCA
TTATCACCGCATCTGCAGGGTGTGGCGGCGCGACAAAGCCGCTACTCGGCGCTCAAGATGGGCCTGCTCCCTTGG
TTTAATTTTGTCAATCATAACCAGCATGGCGTGGATACGGCAAAGTATTATCAGCAAGCTGAGCGGGAACTGTCC
ATGGAGGATGATAAGAAGTCTGGAGTAGAGGCCGGGAGCTAA
Gene >OphauB2|1280
ATGGCCGACGCAAGCAAACAAAGCCAGCAGACGTTTGTGGGCACGAGCAAGGTGGTGCAGACGGAGTTTCCGGTA
CGTTGATTTGCTCCCTTGGGCCTGCAGCAGGCAGCTTGGAGAGCGGTGCAGCAGGACTGACATTGTGCTTGTGCA
GCTCATTGACAACGACCCGTGAGTGCAGTGGCCTCGTCTCAGCGATTTCTTCCAATTCCAGTTATAGAGCAATGT
GTGGTTCTTGTCGACATGACTCAATTGCCAATGGGGGCGACAATGTCCTGATGATGGGCTGTGGCGATTAATCGC
TCGGGGCTAATGGCTGAGCTGACATTTGCCGTCGACAGCCACTTCAAGCGAGTCATCAAGTATGCTCGGCCATCA
GACTACTTTGTTGGGCTTGGCATGACGGCGATGGGGCCGACCTTTATGTGTGCCTTTGAATATTTTTTTCCCTCG
GGCGTTGGCAGAGGCGCCTATCCACGCATCCTACGCCTAGCCGGGCTCGTTGGCGTGACGGGGGGCTTTCTCTGT
TTTTACCAGCGATCAATCTGTACGTGGTATTTTCTTTCTTCTTTTTTCTTCCTTTTTTTGCGAAATAAAGTGCAG
CTGTTGGCACGCTGCAGATTGCCGAGTCTAGAGAGCTGACTTTTGCGCAAGTGCGATTCTACGGCATGCGAGAAA
ATGCGCGCGAGGTGGAAATGGACATGCGTGAAATGGTGGCCAAGGTCAAGGCTGGCGAGCCCTTGTATGGAAAGA
CGTCATTATCACCGCATCTGCAGGGTGTGGCGGCGCGACAAAGCCGCTACTCGGCGCTCAAGATGGGCCTGCTCC
CTTGGTTTAATTTTGTCAATCATAACCAGCATGGCGTGGATACGGCAAAGTATTATCAGCAAGCTGAGCGGGAAC
TGTCCATGGAGGATGATAAGAAGTCTGGAGTAGAGGCCGGGAGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail