Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1271
Gene name
LocationContig_13:247764..248712
Strand-
Gene length (bp)948
Transcript length (bp)948
Coding sequence length (bp)948
Protein length (aa) 316

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18142 SLATT_fungal SMODS and SLOG-associating 2TM effector domain 2.6E-26 107 223

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1271
MSKLNPMQFFSRSTGNGKPDSKGEGRIADAEQGKTQGSEDWKPVTPSYQPHLAHAEVPPHRVLSETEWWTLAQGL
GAMSDKEKQKAVVPSRWPWAASSMPIGLYRDIVARRSKYGFLFQMTNTTRWTLMVLQLLIGAAITSLGATSAKGP
VVTTLGAVNTVAAGLLALMHNSGLPERFSYDKMQFEELEDHVKEMLQVRIVPEGQTVDQALAECCDMFREAKATV
AVNQPASYNSRKSLQDKIGATDKTKAPSGPTVPQTAPVQPTRGDAQPAPQSQAEPDEGPDDGQQEEPTGHDDEAV
AVQAGKKGGDKCQLP*
Coding >OphauB2|1271
ATGTCCAAGCTCAATCCAATGCAATTTTTTTCACGTTCGACTGGCAATGGGAAGCCTGACTCCAAGGGAGAGGGC
AGAATTGCAGATGCAGAACAGGGCAAGACGCAGGGGAGCGAGGATTGGAAGCCGGTGACACCATCATACCAGCCA
CATCTGGCACATGCCGAGGTGCCGCCGCACCGCGTATTGTCAGAAACGGAATGGTGGACACTGGCGCAGGGTCTG
GGCGCCATGAGCGACAAGGAAAAGCAAAAGGCAGTTGTTCCCTCGCGGTGGCCATGGGCGGCATCGAGCATGCCC
ATCGGGCTTTACCGGGACATTGTGGCCAGGCGCAGCAAATATGGCTTCTTGTTCCAAATGACAAACACGACGCGA
TGGACGCTCATGGTGCTGCAGCTGCTGATTGGTGCAGCCATCACGTCGCTGGGGGCCACGTCTGCCAAGGGGCCG
GTTGTGACGACGCTGGGAGCCGTCAACACTGTGGCGGCAGGCCTATTGGCCCTGATGCACAACAGCGGGTTGCCG
GAGCGCTTTAGCTACGACAAGATGCAGTTTGAGGAGCTCGAGGACCACGTCAAGGAAATGCTGCAGGTGCGCATC
GTGCCAGAGGGCCAGACGGTGGACCAGGCGCTGGCCGAGTGTTGCGACATGTTCCGTGAGGCCAAGGCGACGGTA
GCCGTCAACCAGCCGGCCAGCTACAACTCGCGCAAATCGCTACAGGACAAGATTGGGGCGACTGACAAGACCAAG
GCGCCCAGTGGGCCGACGGTGCCACAGACGGCCCCGGTGCAGCCCACACGTGGGGATGCTCAGCCGGCGCCCCAG
TCGCAGGCGGAGCCTGACGAGGGCCCTGATGACGGGCAACAAGAGGAGCCCACGGGGCACGACGACGAGGCAGTG
GCGGTGCAGGCGGGCAAAAAGGGCGGCGATAAATGCCAGCTGCCATGA
Transcript >OphauB2|1271
ATGTCCAAGCTCAATCCAATGCAATTTTTTTCACGTTCGACTGGCAATGGGAAGCCTGACTCCAAGGGAGAGGGC
AGAATTGCAGATGCAGAACAGGGCAAGACGCAGGGGAGCGAGGATTGGAAGCCGGTGACACCATCATACCAGCCA
CATCTGGCACATGCCGAGGTGCCGCCGCACCGCGTATTGTCAGAAACGGAATGGTGGACACTGGCGCAGGGTCTG
GGCGCCATGAGCGACAAGGAAAAGCAAAAGGCAGTTGTTCCCTCGCGGTGGCCATGGGCGGCATCGAGCATGCCC
ATCGGGCTTTACCGGGACATTGTGGCCAGGCGCAGCAAATATGGCTTCTTGTTCCAAATGACAAACACGACGCGA
TGGACGCTCATGGTGCTGCAGCTGCTGATTGGTGCAGCCATCACGTCGCTGGGGGCCACGTCTGCCAAGGGGCCG
GTTGTGACGACGCTGGGAGCCGTCAACACTGTGGCGGCAGGCCTATTGGCCCTGATGCACAACAGCGGGTTGCCG
GAGCGCTTTAGCTACGACAAGATGCAGTTTGAGGAGCTCGAGGACCACGTCAAGGAAATGCTGCAGGTGCGCATC
GTGCCAGAGGGCCAGACGGTGGACCAGGCGCTGGCCGAGTGTTGCGACATGTTCCGTGAGGCCAAGGCGACGGTA
GCCGTCAACCAGCCGGCCAGCTACAACTCGCGCAAATCGCTACAGGACAAGATTGGGGCGACTGACAAGACCAAG
GCGCCCAGTGGGCCGACGGTGCCACAGACGGCCCCGGTGCAGCCCACACGTGGGGATGCTCAGCCGGCGCCCCAG
TCGCAGGCGGAGCCTGACGAGGGCCCTGATGACGGGCAACAAGAGGAGCCCACGGGGCACGACGACGAGGCAGTG
GCGGTGCAGGCGGGCAAAAAGGGCGGCGATAAATGCCAGCTGCCATGA
Gene >OphauB2|1271
ATGTCCAAGCTCAATCCAATGCAATTTTTTTCACGTTCGACTGGCAATGGGAAGCCTGACTCCAAGGGAGAGGGC
AGAATTGCAGATGCAGAACAGGGCAAGACGCAGGGGAGCGAGGATTGGAAGCCGGTGACACCATCATACCAGCCA
CATCTGGCACATGCCGAGGTGCCGCCGCACCGCGTATTGTCAGAAACGGAATGGTGGACACTGGCGCAGGGTCTG
GGCGCCATGAGCGACAAGGAAAAGCAAAAGGCAGTTGTTCCCTCGCGGTGGCCATGGGCGGCATCGAGCATGCCC
ATCGGGCTTTACCGGGACATTGTGGCCAGGCGCAGCAAATATGGCTTCTTGTTCCAAATGACAAACACGACGCGA
TGGACGCTCATGGTGCTGCAGCTGCTGATTGGTGCAGCCATCACGTCGCTGGGGGCCACGTCTGCCAAGGGGCCG
GTTGTGACGACGCTGGGAGCCGTCAACACTGTGGCGGCAGGCCTATTGGCCCTGATGCACAACAGCGGGTTGCCG
GAGCGCTTTAGCTACGACAAGATGCAGTTTGAGGAGCTCGAGGACCACGTCAAGGAAATGCTGCAGGTGCGCATC
GTGCCAGAGGGCCAGACGGTGGACCAGGCGCTGGCCGAGTGTTGCGACATGTTCCGTGAGGCCAAGGCGACGGTA
GCCGTCAACCAGCCGGCCAGCTACAACTCGCGCAAATCGCTACAGGACAAGATTGGGGCGACTGACAAGACCAAG
GCGCCCAGTGGGCCGACGGTGCCACAGACGGCCCCGGTGCAGCCCACACGTGGGGATGCTCAGCCGGCGCCCCAG
TCGCAGGCGGAGCCTGACGAGGGCCCTGATGACGGGCAACAAGAGGAGCCCACGGGGCACGACGACGAGGCAGTG
GCGGTGCAGGCGGGCAAAAAGGGCGGCGATAAATGCCAGCTGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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