© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|1268 |
| Gene name | |
| Location | Contig_13:240791..242406 |
| Strand | - |
| Gene length (bp) | 1615 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00561 | Abhydrolase_1 | alpha/beta hydrolase fold | 9.9E-17 | 157 | 453 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 2.9E-14 | 158 | 504 |
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 5.9E-13 | 153 | 275 |
| PF06028 | DUF915 | Alpha/beta hydrolase of unknown function (DUF915) | 5.7E-05 | 196 | 255 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14249|CLD1_SCHPO | probable cardiolipin-specific deacylase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.03c PE=3 SV=1 | 139 | 517 | 2.0E-93 |
| sp|P53264|CLD1_YEAST | Cardiolipin-specific deacylase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLD1 PE=1 SV=1 | 139 | 511 | 3.0E-56 |
| sp|O22975|LPAAT_ARATH | 1-acylglycerol-3-phosphate O-acyltransferase OS=Arabidopsis thaliana GN=At4g24160 PE=1 SV=1 | 89 | 503 | 3.0E-52 |
| sp|Q0J0A4|LPAAT_ORYSJ | Probable 1-acylglycerol-3-phosphate O-acyltransferase OS=Oryza sativa subsp. japonica GN=Os09g0520200 PE=3 SV=3 | 76 | 506 | 5.0E-49 |
| sp|Q5EA59|ABHD4_BOVIN | Abhydrolase domain-containing protein 4 OS=Bos taurus GN=ABHD4 PE=2 SV=1 | 158 | 514 | 2.0E-35 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14249|CLD1_SCHPO | probable cardiolipin-specific deacylase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.03c PE=3 SV=1 | 139 | 517 | 2.0E-93 |
| sp|P53264|CLD1_YEAST | Cardiolipin-specific deacylase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLD1 PE=1 SV=1 | 139 | 511 | 3.0E-56 |
| sp|O22975|LPAAT_ARATH | 1-acylglycerol-3-phosphate O-acyltransferase OS=Arabidopsis thaliana GN=At4g24160 PE=1 SV=1 | 89 | 503 | 3.0E-52 |
| sp|Q0J0A4|LPAAT_ORYSJ | Probable 1-acylglycerol-3-phosphate O-acyltransferase OS=Oryza sativa subsp. japonica GN=Os09g0520200 PE=3 SV=3 | 76 | 506 | 5.0E-49 |
| sp|Q5EA59|ABHD4_BOVIN | Abhydrolase domain-containing protein 4 OS=Bos taurus GN=ABHD4 PE=2 SV=1 | 158 | 514 | 2.0E-35 |
| sp|Q8VD66|ABHD4_MOUSE | Abhydrolase domain-containing protein 4 OS=Mus musculus GN=Abhd4 PE=1 SV=1 | 158 | 508 | 3.0E-35 |
| sp|Q8TB40|ABHD4_HUMAN | Abhydrolase domain-containing protein 4 OS=Homo sapiens GN=ABHD4 PE=2 SV=1 | 158 | 514 | 1.0E-34 |
| sp|Q12385|ICT1_YEAST | 1-acylglycerol-3-phosphate O-acyltransferase ICT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ICT1 PE=3 SV=1 | 159 | 502 | 5.0E-33 |
| sp|Q6QA69|ABHD5_RAT | 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 OS=Rattus norvegicus GN=Abhd5 PE=1 SV=1 | 174 | 508 | 4.0E-29 |
| sp|Q9DBL9|ABHD5_MOUSE | 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 OS=Mus musculus GN=Abhd5 PE=1 SV=1 | 174 | 508 | 5.0E-29 |
| sp|Q04623|ECM18_YEAST | Protein ECM18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM18 PE=1 SV=1 | 159 | 512 | 1.0E-28 |
| sp|Q5RBI4|ABHD5_PONAB | 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 OS=Pongo abelii GN=ABHD5 PE=2 SV=1 | 186 | 515 | 2.0E-28 |
| sp|Q8WTS1|ABHD5_HUMAN | 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 OS=Homo sapiens GN=ABHD5 PE=1 SV=1 | 186 | 515 | 2.0E-28 |
| sp|Q5EE05|ABHD5_PIG | 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 OS=Sus scrofa GN=ABHD5 PE=2 SV=1 | 186 | 515 | 9.0E-28 |
| sp|P23133|TODF_PSEP1 | 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=todF PE=3 SV=2 | 146 | 270 | 4.0E-08 |
| sp|P9WNH5|HSAD_MYCTU | 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=hsaD PE=1 SV=1 | 146 | 287 | 3.0E-07 |
| sp|P9WNH4|HSAD_MYCTO | 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=hsaD PE=3 SV=1 | 146 | 287 | 3.0E-07 |
| sp|Q13QH4|MHPC_BURXL | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Burkholderia xenovorans (strain LB400) GN=mhpC PE=3 SV=1 | 156 | 264 | 6.0E-07 |
| sp|B2JQW2|MHPC_BURP8 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=mhpC PE=3 SV=1 | 156 | 264 | 8.0E-07 |
| sp|P19076|DMPD_PSEUF | 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain CF600) GN=dmpD PE=3 SV=1 | 146 | 270 | 1.0E-06 |
| sp|C7PDD8|PIP_CHIPD | Proline iminopeptidase OS=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_0261 PE=3 SV=2 | 151 | 268 | 2.0E-06 |
| sp|Q476M7|MHPC_CUPPJ | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=mhpC PE=3 SV=1 | 156 | 264 | 3.0E-06 |
| sp|P77044|MHPC_ECOLI | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12) GN=mhpC PE=1 SV=4 | 155 | 264 | 4.0E-06 |
| sp|B1XBJ6|MHPC_ECODH | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12 / DH10B) GN=mhpC PE=3 SV=2 | 155 | 264 | 4.0E-06 |
| sp|O05420|PIP_ELIME | Proline iminopeptidase OS=Elizabethkingia meningoseptica GN=fpaP PE=1 SV=1 | 154 | 266 | 5.0E-06 |
| sp|Q49KF8|MHPC1_PSEPU | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase 1 OS=Pseudomonas putida GN=mhpC1 PE=3 SV=2 | 156 | 264 | 5.0E-06 |
| sp|B7MPB6|MHPC_ECO81 | 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli O81 (strain ED1a) GN=mhpC PE=3 SV=2 | 155 | 264 | 8.0E-06 |
| Orthofinder run ID | 4 |
| Orthogroup | 1413 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1268 MLKTHTASALLQRSRITLAATSSSPPPSSSPASSATKSPITMSSTEGPVRPPQSQQQLKDQRPPESAYFPLGYKE AAYQWWTSVTPSIAEYNVLSLIPHVREATKTTTGSDVSSPNTDPHGPRLWRRSLVPLSGKNRALNEVCIEHDGAS SNPPDETLVMIHGYGAGLGFFYKNFEPISRIRGLRLYALDMLGMGNSSRPCFKIHAKEKNKQVIEAEDWFIDALE EWRKERKLERFTLLGHSLGGYLAVSYAIKYPGRLNKLILASPVGIPEDPYAVNASMPDPTDSSLAQEFTQDQQSV IENSSIPSSTSKKALITRTKDGNAPKRPLPGWLVWLWDANVSPFSLVRLTGPLGPRLVSGWSSRRFNHLPTQEAQ ALHNYSFSIFKQRGSGEYALAYILAPGAYARRPIINRIHEVGRQSLALPDGSRVKETGIPIVFMYGENDWMDVAG GLAAKQRIKETSERALRQATSPQEQEAEKGSAKVIIIPRSGHHLYLDNPDEFNRVLREEIEDTMQDLKK* |
| Coding | >OphauB2|1268 ATGCTCAAGACGCACACTGCCTCGGCGCTTCTTCAACGATCGCGCATTACTCTCGCTGCCACTTCGTCCTCGCCT CCGCCATCCTCGTCGCCCGCCTCTTCGGCCACCAAGAGTCCCATCACAATGTCTTCTACCGAGGGTCCCGTGCGC CCGCCTCAGAGCCAGCAGCAGCTCAAGGACCAGCGTCCTCCTGAATCAGCCTACTTTCCTCTGGGCTACAAAGAG GCTGCCTACCAATGGTGGACCAGTGTCACACCCTCAATTGCAGAGTACAATGTGCTCTCTCTAATACCCCATGTT CGCGAGGCCACCAAGACGACTACCGGTAGTGACGTCTCCTCTCCTAATACCGATCCCCATGGCCCTCGTTTGTGG CGTCGCTCTCTTGTTCCACTTTCGGGCAAAAACCGTGCGCTCAACGAAGTATGCATCGAACATGATGGCGCTTCA TCAAATCCACCCGACGAGACGCTCGTCATGATACATGGCTATGGCGCCGGCCTGGGTTTCTTCTACAAGAATTTC GAGCCCATATCTCGCATACGTGGCCTTCGATTATATGCCCTTGATATGCTTGGAATGGGCAATTCGTCCCGTCCA TGCTTCAAAATTCACGCCAAGGAAAAGAACAAGCAGGTTATAGAGGCCGAGGACTGGTTTATAGATGCCCTCGAG GAGTGGCGCAAGGAGCGCAAGCTCGAGCGCTTTACGCTTCTCGGCCACTCTCTTGGCGGCTATCTGGCCGTTTCA TACGCCATCAAGTATCCTGGTCGCTTGAATAAGCTCATTCTCGCCTCTCCCGTTGGCATTCCCGAGGATCCTTAT GCCGTCAACGCCTCCATGCCCGATCCAACAGATTCATCCCTGGCACAGGAATTCACACAGGATCAGCAATCAGTA ATCGAAAACTCGAGCATCCCATCAAGTACGTCCAAAAAGGCCCTCATTACAAGAACAAAAGACGGCAATGCACCC AAGCGGCCCTTGCCCGGTTGGCTCGTCTGGCTTTGGGATGCAAATGTGTCTCCCTTCAGTCTGGTTCGTCTAACG GGGCCCCTGGGCCCACGCCTTGTTTCTGGCTGGAGTTCGCGTCGTTTCAACCACCTTCCTACCCAAGAAGCCCAA GCCCTGCATAATTACTCGTTTTCCATTTTCAAACAAAGAGGCAGCGGCGAGTACGCTCTCGCATACATACTGGCT CCCGGGGCCTACGCCCGTAGGCCCATCATCAACCGCATACACGAGGTTGGTCGCCAGTCTCTGGCCCTCCCCGAT GGCAGTCGCGTCAAGGAAACCGGGATTCCCATCGTCTTCATGTATGGTGAAAACGACTGGATGGATGTGGCTGGC GGCCTTGCTGCCAAGCAACGCATCAAAGAGACCAGCGAGCGTGCCTTGCGCCAAGCCACTTCACCCCAAGAACAA GAAGCCGAAAAGGGCAGTGCCAAAGTTATCATAATCCCCAGATCGGGCCATCACCTATATCTTGACAATCCAGAC GAATTCAACCGTGTCCTACGTGAAGAAATAGAGGATACCATGCAGGATCTCAAAAAATAG |
| Transcript | >OphauB2|1268 ATGCTCAAGACGCACACTGCCTCGGCGCTTCTTCAACGATCGCGCATTACTCTCGCTGCCACTTCGTCCTCGCCT CCGCCATCCTCGTCGCCCGCCTCTTCGGCCACCAAGAGTCCCATCACAATGTCTTCTACCGAGGGTCCCGTGCGC CCGCCTCAGAGCCAGCAGCAGCTCAAGGACCAGCGTCCTCCTGAATCAGCCTACTTTCCTCTGGGCTACAAAGAG GCTGCCTACCAATGGTGGACCAGTGTCACACCCTCAATTGCAGAGTACAATGTGCTCTCTCTAATACCCCATGTT CGCGAGGCCACCAAGACGACTACCGGTAGTGACGTCTCCTCTCCTAATACCGATCCCCATGGCCCTCGTTTGTGG CGTCGCTCTCTTGTTCCACTTTCGGGCAAAAACCGTGCGCTCAACGAAGTATGCATCGAACATGATGGCGCTTCA TCAAATCCACCCGACGAGACGCTCGTCATGATACATGGCTATGGCGCCGGCCTGGGTTTCTTCTACAAGAATTTC GAGCCCATATCTCGCATACGTGGCCTTCGATTATATGCCCTTGATATGCTTGGAATGGGCAATTCGTCCCGTCCA TGCTTCAAAATTCACGCCAAGGAAAAGAACAAGCAGGTTATAGAGGCCGAGGACTGGTTTATAGATGCCCTCGAG GAGTGGCGCAAGGAGCGCAAGCTCGAGCGCTTTACGCTTCTCGGCCACTCTCTTGGCGGCTATCTGGCCGTTTCA TACGCCATCAAGTATCCTGGTCGCTTGAATAAGCTCATTCTCGCCTCTCCCGTTGGCATTCCCGAGGATCCTTAT GCCGTCAACGCCTCCATGCCCGATCCAACAGATTCATCCCTGGCACAGGAATTCACACAGGATCAGCAATCAGTA ATCGAAAACTCGAGCATCCCATCAAGTACGTCCAAAAAGGCCCTCATTACAAGAACAAAAGACGGCAATGCACCC AAGCGGCCCTTGCCCGGTTGGCTCGTCTGGCTTTGGGATGCAAATGTGTCTCCCTTCAGTCTGGTTCGTCTAACG GGGCCCCTGGGCCCACGCCTTGTTTCTGGCTGGAGTTCGCGTCGTTTCAACCACCTTCCTACCCAAGAAGCCCAA GCCCTGCATAATTACTCGTTTTCCATTTTCAAACAAAGAGGCAGCGGCGAGTACGCTCTCGCATACATACTGGCT CCCGGGGCCTACGCCCGTAGGCCCATCATCAACCGCATACACGAGGTTGGTCGCCAGTCTCTGGCCCTCCCCGAT GGCAGTCGCGTCAAGGAAACCGGGATTCCCATCGTCTTCATGTATGGTGAAAACGACTGGATGGATGTGGCTGGC GGCCTTGCTGCCAAGCAACGCATCAAAGAGACCAGCGAGCGTGCCTTGCGCCAAGCCACTTCACCCCAAGAACAA GAAGCCGAAAAGGGCAGTGCCAAAGTTATCATAATCCCCAGATCGGGCCATCACCTATATCTTGACAATCCAGAC GAATTCAACCGTGTCCTACGTGAAGAAATAGAGGATACCATGCAGGATCTCAAAAAATAG |
| Gene | >OphauB2|1268 ATGCTCAAGACGCACACTGCCTCGGCGCTTCTTCAACGATCGCGCATTACTCTCGCTGCCACTTCGTCCTCGCCT CCGCCATCCTCGTCGCCCGCCTCTTCGGCCACCAAGAGTCCCATCACAATGTCTTCTACCGAGGGTCCCGTGCGC CCGCCTCAGAGCCAGCAGCAGCTCAAGGACCAGCGTCCTCCTGAATCAGCCTACTTTCCTCTGGGCTACAAAGAG GCTGCCTACCAATGGGTTTGTTGCCTTTTGCCACACAAAATCCCTAACAAGAATACTCATTTTTCTCCAGTGGAC CAGTGTCACACCCTCAATTGCAGAGTACAATGTGCTCTCTCTAATACCCCATGTTCGCGAGGCCACCAAGACGAC TACCGGTAGTGACGTCTCCTCTCCTAATACCGATCCCCATGGCCCTCGTTTGTGGCGTCGCTCTCTTGTTCCACT TTCGGGCAAAAACCGTGCGCTCAACGAAGTATGCATCGAACATGATGGCGCTTCATCAAATCCACCCGACGAGAC GCTCGTCATGATACATGGCTATGGCGCCGGCCTGGGTTTCTTCTACAAGAATTTCGAGCCCATATCTCGCATACG TGGCCTTCGATTATATGCCCTTGATATGCTTGGAATGGGCAATTCGTCCCGTCCATGCTTCAAAATTCACGCCAA GGAAAAGAACAAGCAGGTTATAGAGGCCGAGGACTGGTTTATAGATGCCCTCGAGGAGTGGCGCAAGGAGCGCAA GCTCGAGCGCTTTACGCTTCTCGGCCACTCTCTTGGCGGCTATCTGGCCGTTTCATACGCCATCAAGTATCCTGG TCGCTTGAATAAGCTCATTCTCGCCTCTCCCGTTGGCATTCCCGAGGATCCTTATGCCGTCAACGCCTCCATGCC CGATCCAACAGATTCATCCCTGGCACAGGAATTCACACAGGATCAGCAATCAGTAATCGAAAACTCGAGCATCCC ATCAAGTACGTCCAAAAAGGCCCTCATTACAAGAACAAAAGACGGCAATGCACCCAAGCGGCCCTTGCCCGGTTG GCTCGTCTGGCTTTGGGATGCAAATGTGTCTCCCTTCAGTCTGGTTCGTCTAACGGGGCCCCTGGGCCCACGCCT TGTTTCTGGCTGGAGTTCGCGTCGTTTCAACCACCTTCCTACCCAAGAAGCCCAAGCCCTGCATAATTACTCGTT TTCCATTTTCAAACAAAGAGGCAGCGGCGAGTACGCTCTCGCATACATACTGGCTCCCGGGGCCTACGCCCGTAG GCCCATCATCAACCGCATACACGAGGTTGGTCGCCAGTCTCTGGCCCTCCCCGATGGCAGTCGCGTCAAGGAAAC CGGGATTCCCATCGTCTTCATGTATGGTGAAAACGACTGGATGGATGTGGCTGGCGGCCTTGCTGCCAAGCAACG CATCAAAGAGACCAGCGAGCGTGCCTTGCGCCAAGCCACTTCACCCCAAGAACAAGAAGCCGAAAAGGGCAGTGC CAAAGTTATCATAATCCCCAGATCGGGCCATCACCTATATCTTGACAATCCAGACGAATTCAACCGTGTCCTACG TGAAGAAATAGAGGATACCATGCAGGATCTCAAAAAATAG |