© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|1258 |
| Gene name | |
| Location | Contig_13:211997..212918 |
| Strand | - |
| Gene length (bp) | 921 |
| Transcript length (bp) | 870 |
| Coding sequence length (bp) | 870 |
| Protein length (aa) | 290 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10173 | Mit_KHE1 | Mitochondrial K+-H+ exchange-related | 1.8E-59 | 2 | 180 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13942|YEPC_SCHPO | Uncharacterized protein C23H3.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.12c PE=4 SV=1 | 1 | 195 | 2.0E-19 |
| sp|P48569|YD183_YEAST | Uncharacterized protein YDL183C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL183C PE=4 SV=1 | 1 | 248 | 3.0E-12 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 138 | 160 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1258 MRIFLLPISTRRTFLYAQRLRASGQKASATERPESAIDRATAWATRKWSDWEHKPSGWQRKVVDYGNHAFRRIPY QEWGLKSITAAAAARNRRGEGDKVQLAFPGSIIPVEEAEAMALKLATERLALHRSKMIWCFVAMPITIPFALVPV IPNLPFFYLVYRAWSHWRAILGGKQIQSLVDNKLIELSPSSLLDQLYQKTWCCRGDRLGPEDKEEMLLTQPQVRE FCKTLDVAALEIELERAIWQVEKLLRDEKPNREANPVVTHDGKGAELQQHEAARGNSASDKKRG* |
| Coding | >OphauB2|1258 ATGCGCATTTTTCTCCTTCCCATATCGACCCGCCGCACATTTTTGTACGCGCAGCGCCTCCGTGCCTCTGGCCAA AAAGCCTCAGCGACAGAGCGGCCCGAAAGCGCCATCGATCGGGCCACGGCATGGGCGACGCGCAAATGGTCGGAC TGGGAGCATAAGCCGTCGGGCTGGCAGCGCAAGGTGGTGGATTATGGCAACCATGCCTTTCGCCGCATCCCCTAC CAAGAATGGGGGCTCAAGTCGATCACTGCAGCAGCAGCTGCCAGAAACCGCCGCGGTGAGGGCGACAAAGTGCAG CTCGCGTTTCCGGGGAGCATCATCCCGGTGGAGGAGGCAGAAGCGATGGCCTTGAAGCTGGCGACGGAGCGCCTG GCCCTGCACCGCAGCAAGATGATTTGGTGCTTTGTCGCCATGCCTATAACGATACCATTTGCCCTAGTTCCAGTT ATACCCAATCTTCCTTTCTTCTATCTCGTCTACCGTGCCTGGTCACATTGGCGAGCAATATTGGGCGGAAAGCAG ATTCAGAGTCTTGTCGATAACAAACTCATTGAGCTTTCGCCGTCTTCGCTTCTTGACCAATTATACCAAAAGACT TGGTGCTGTCGTGGGGATAGATTGGGGCCAGAGGACAAGGAGGAGATGCTCCTCACTCAACCCCAGGTCCGAGAA TTCTGCAAAACTCTCGACGTTGCAGCTCTCGAAATTGAACTAGAGCGAGCTATTTGGCAGGTTGAAAAGCTGCTG CGAGATGAGAAGCCAAACCGGGAAGCCAACCCTGTGGTAACCCATGATGGCAAGGGCGCCGAGTTGCAGCAGCAC GAGGCTGCCAGGGGCAATTCTGCTTCTGACAAGAAGAGAGGATGA |
| Transcript | >OphauB2|1258 ATGCGCATTTTTCTCCTTCCCATATCGACCCGCCGCACATTTTTGTACGCGCAGCGCCTCCGTGCCTCTGGCCAA AAAGCCTCAGCGACAGAGCGGCCCGAAAGCGCCATCGATCGGGCCACGGCATGGGCGACGCGCAAATGGTCGGAC TGGGAGCATAAGCCGTCGGGCTGGCAGCGCAAGGTGGTGGATTATGGCAACCATGCCTTTCGCCGCATCCCCTAC CAAGAATGGGGGCTCAAGTCGATCACTGCAGCAGCAGCTGCCAGAAACCGCCGCGGTGAGGGCGACAAAGTGCAG CTCGCGTTTCCGGGGAGCATCATCCCGGTGGAGGAGGCAGAAGCGATGGCCTTGAAGCTGGCGACGGAGCGCCTG GCCCTGCACCGCAGCAAGATGATTTGGTGCTTTGTCGCCATGCCTATAACGATACCATTTGCCCTAGTTCCAGTT ATACCCAATCTTCCTTTCTTCTATCTCGTCTACCGTGCCTGGTCACATTGGCGAGCAATATTGGGCGGAAAGCAG ATTCAGAGTCTTGTCGATAACAAACTCATTGAGCTTTCGCCGTCTTCGCTTCTTGACCAATTATACCAAAAGACT TGGTGCTGTCGTGGGGATAGATTGGGGCCAGAGGACAAGGAGGAGATGCTCCTCACTCAACCCCAGGTCCGAGAA TTCTGCAAAACTCTCGACGTTGCAGCTCTCGAAATTGAACTAGAGCGAGCTATTTGGCAGGTTGAAAAGCTGCTG CGAGATGAGAAGCCAAACCGGGAAGCCAACCCTGTGGTAACCCATGATGGCAAGGGCGCCGAGTTGCAGCAGCAC GAGGCTGCCAGGGGCAATTCTGCTTCTGACAAGAAGAGAGGATGA |
| Gene | >OphauB2|1258 ATGCGCATTTTTCTCCTTCCCATATCGACCCGCCGCACATTTTTGTACGCGCAGCGCCTCCGTGCCTCTGGCCAA AAAGCCTCAGCGACAGAGCGGCCCGAAAGCGCCATCGATCGGGCCACGGCATGGGCGACGCGCAAATGGTCGGAC TGGGAGCATAAGCCGTCGGGCTGGCAGCGCAAGGTGGTGGATTATGGCAACCATGCCTTTCGCCGCATCCCCTAC CAAGAATGGGGGCTCAAGTCGATCACTGCAGCAGCAGCTGCCAGAAACCGCCGCGGTGAGGGCGACAAAGTGCAG CTCGCGTTTCCGGGGAGCATCATCCCGGTGGAGGAGGCAGAAGCGATGGCCTTGAAGCTGGCGACGGAGCGCCTG GCCCTGCACCGCAGCAAGATGATTTGGTGCTTTGTCGCCATGCCTATAACGATACCATTTGCCCTAGTTCCAGTG TAAGAGTCCAAGTCTGTCCGCCGCTACGTCATCTGACTGTATCACACCAGTATACCCAATCTTCCTTTCTTCTAT CTCGTCTACCGTGCCTGGTCACATTGGCGAGCAATATTGGGCGGAAAGCAGATTCAGAGTCTTGTCGATAACAAA CTCATTGAGCTTTCGCCGTCTTCGCTTCTTGACCAATTATACCAAAAGACTTGGTGCTGTCGTGGGGATAGATTG GGGCCAGAGGACAAGGAGGAGATGCTCCTCACTCAACCCCAGGTCCGAGAATTCTGCAAAACTCTCGACGTTGCA GCTCTCGAAATTGAACTAGAGCGAGCTATTTGGCAGGTTGAAAAGCTGCTGCGAGATGAGAAGCCAAACCGGGAA GCCAACCCTGTGGTAACCCATGATGGCAAGGGCGCCGAGTTGCAGCAGCACGAGGCTGCCAGGGGCAATTCTGCT TCTGACAAGAAGAGAGGATGA |