Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1234
Gene name
LocationContig_13:135908..137315
Strand+
Gene length (bp)1407
Transcript length (bp)1407
Coding sequence length (bp)1407
Protein length (aa) 469

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04757 Pex2_Pex12 Pex2 / Pex12 amino terminal region 3.1E-50 63 318

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|C8VCP8|PEX12_EMENI Peroxisome assembly protein 12 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=PEX12 PE=3 SV=1 39 468 1.0E-155
sp|Q01961|PEX12_PICPA Peroxisome assembly protein 12 OS=Komagataella pastoris GN=PEX12 PE=3 SV=1 39 468 9.0E-48
sp|Q8VC48|PEX12_MOUSE Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1 51 426 9.0E-36
sp|Q9ET67|PEX12_CRILO Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1 51 426 1.0E-35
sp|O00623|PEX12_HUMAN Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1 51 426 5.0E-35
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|C8VCP8|PEX12_EMENI Peroxisome assembly protein 12 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=PEX12 PE=3 SV=1 39 468 1.0E-155
sp|Q01961|PEX12_PICPA Peroxisome assembly protein 12 OS=Komagataella pastoris GN=PEX12 PE=3 SV=1 39 468 9.0E-48
sp|Q8VC48|PEX12_MOUSE Peroxisome assembly protein 12 OS=Mus musculus GN=Pex12 PE=1 SV=1 51 426 9.0E-36
sp|Q9ET67|PEX12_CRILO Peroxisome assembly protein 12 OS=Cricetulus longicaudatus GN=PEX12 PE=2 SV=1 51 426 1.0E-35
sp|O00623|PEX12_HUMAN Peroxisome assembly protein 12 OS=Homo sapiens GN=PEX12 PE=1 SV=1 51 426 5.0E-35
sp|O88177|PEX12_RAT Peroxisome assembly protein 12 OS=Rattus norvegicus GN=Pex12 PE=2 SV=1 51 426 2.0E-33
sp|A4FUD4|PEX12_BOVIN Peroxisome assembly protein 12 OS=Bos taurus GN=PEX12 PE=2 SV=1 51 426 5.0E-33
sp|Q19189|PEX12_CAEEL Putative peroxisome assembly protein 12 OS=Caenorhabditis elegans GN=prx-12 PE=3 SV=1 38 425 6.0E-24
sp|Q8TFH8|PEX12_SCHPO Peroxisome assembly protein 12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pex12 PE=3 SV=2 54 425 3.0E-19
sp|Q04370|PEX12_YEAST Peroxisome assembly protein 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX12 PE=1 SV=1 54 468 7.0E-18
sp|Q9M841|PEX12_ARATH Peroxisome biogenesis protein 12 OS=Arabidopsis thaliana GN=PEX12 PE=1 SV=2 50 424 1.0E-15
sp|Q54N40|PEX12_DICDI Putative peroxisome assembly protein 12 OS=Dictyostelium discoideum GN=pex12 PE=3 SV=1 211 425 7.0E-12
sp|Q9VPT5|PEX12_DROME Peroxisome assembly protein 12 OS=Drosophila melanogaster GN=Pex12 PE=2 SV=1 54 420 3.0E-10
sp|Q54N40|PEX12_DICDI Putative peroxisome assembly protein 12 OS=Dictyostelium discoideum GN=pex12 PE=3 SV=1 41 188 8.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 214 236 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1234
MTGHAQRLHAIHQRLHLVPSVSTVAHDLGKGIVELSPAMEFVTALRGTFDDKKPSLFEVFAEQQLNGLLPPTLRY
LLTVATQRYPRYLLRALNSFDELYALAMLVVERHYLSTCGASFTEHFYGLKREKSLRGEIPRASLAAPHLVRETL
GLTTADVWKNLAVLVGLPYIKRKLDEGYDINAPRALLGAAYTRMPDDATWRDRFLHYYRCFLRHIYPSINAAYYF
SILAFNLAYLFDKSKYHNPFMWLIGTRLRRMSAADYQAIEAQAKRRVSKPGARPGARSILSPSKWGSKALSSLSI
LLPMSIFALKFLEWWYQSDFAKQLSHKTAEKIELPPPIISSARANDKPDTAESSRETREQDQDAAPVEISAQEAP
IAAQSRLPIHVVRPPRDSAACPICQDDIVTPTVCQTGIVYCYTCIHKWIQGAHDRQEAFMQGRQGKWESGQGRCA
VTGKRLLGGTQGLRRIII*
Coding >OphauB2|1234
ATGACTGGCCATGCTCAACGCTTGCATGCAATCCATCAGCGACTGCATCTCGTCCCATCCGTCTCGACAGTCGCC
CACGACTTGGGCAAAGGCATCGTTGAGCTCTCGCCTGCCATGGAATTCGTCACGGCCCTCAGGGGCACCTTTGAC
GACAAGAAGCCCTCGCTCTTTGAGGTGTTTGCCGAACAGCAGCTCAATGGCCTCTTGCCACCGACGCTGCGATAC
CTGCTAACCGTGGCCACCCAGCGGTATCCGCGTTACCTGCTCCGAGCCCTCAACTCGTTTGACGAGCTGTACGCG
CTGGCAATGCTCGTGGTTGAGCGCCACTACTTGAGCACCTGCGGCGCTTCCTTTACAGAGCACTTTTACGGCCTC
AAGCGTGAAAAGTCGCTGAGGGGCGAGATTCCGCGCGCAAGTCTGGCAGCGCCGCATCTGGTTCGAGAGACGCTT
GGGCTGACGACGGCCGACGTGTGGAAAAACTTGGCTGTGCTGGTTGGCCTGCCCTACATCAAGAGGAAGCTTGAC
GAGGGCTACGATATCAATGCCCCTCGGGCCCTGCTCGGCGCGGCTTATACGCGCATGCCTGACGATGCAACATGG
CGCGACCGCTTTCTCCATTACTACCGCTGCTTTCTCCGCCACATTTACCCCAGCATCAACGCCGCTTATTATTTT
TCCATACTCGCTTTCAATCTCGCCTATTTATTCGACAAGTCCAAGTACCATAACCCTTTCATGTGGCTCATTGGC
ACCAGGCTGCGCAGAATGTCTGCTGCAGACTACCAGGCCATTGAGGCACAGGCAAAGAGACGGGTGTCCAAGCCC
GGTGCCCGACCCGGCGCCCGATCAATCTTGTCGCCAAGCAAGTGGGGATCCAAGGCCCTCTCGAGCTTGTCTATT
CTGCTGCCCATGAGTATATTTGCTCTCAAGTTCCTCGAATGGTGGTATCAGTCCGATTTTGCAAAGCAGCTCTCG
CACAAGACTGCCGAGAAGATTGAGCTGCCCCCTCCAATCATTTCTAGCGCCAGAGCAAATGACAAACCCGACACG
GCCGAGTCCTCCCGGGAAACAAGAGAGCAAGACCAAGATGCCGCGCCCGTGGAAATCTCGGCCCAAGAGGCACCC
ATTGCGGCGCAGTCCAGGCTGCCTATTCACGTTGTCCGGCCTCCGCGTGACTCAGCAGCGTGTCCGATATGTCAA
GACGACATTGTCACTCCAACAGTCTGCCAAACAGGCATTGTCTACTGCTACACGTGCATCCACAAATGGATCCAA
GGTGCACACGACAGGCAAGAAGCTTTCATGCAAGGCCGCCAAGGGAAATGGGAGAGTGGCCAAGGTCGATGTGCT
GTCACCGGGAAACGGCTGCTAGGCGGAACCCAAGGACTTAGGCGCATCATCATCTAG
Transcript >OphauB2|1234
ATGACTGGCCATGCTCAACGCTTGCATGCAATCCATCAGCGACTGCATCTCGTCCCATCCGTCTCGACAGTCGCC
CACGACTTGGGCAAAGGCATCGTTGAGCTCTCGCCTGCCATGGAATTCGTCACGGCCCTCAGGGGCACCTTTGAC
GACAAGAAGCCCTCGCTCTTTGAGGTGTTTGCCGAACAGCAGCTCAATGGCCTCTTGCCACCGACGCTGCGATAC
CTGCTAACCGTGGCCACCCAGCGGTATCCGCGTTACCTGCTCCGAGCCCTCAACTCGTTTGACGAGCTGTACGCG
CTGGCAATGCTCGTGGTTGAGCGCCACTACTTGAGCACCTGCGGCGCTTCCTTTACAGAGCACTTTTACGGCCTC
AAGCGTGAAAAGTCGCTGAGGGGCGAGATTCCGCGCGCAAGTCTGGCAGCGCCGCATCTGGTTCGAGAGACGCTT
GGGCTGACGACGGCCGACGTGTGGAAAAACTTGGCTGTGCTGGTTGGCCTGCCCTACATCAAGAGGAAGCTTGAC
GAGGGCTACGATATCAATGCCCCTCGGGCCCTGCTCGGCGCGGCTTATACGCGCATGCCTGACGATGCAACATGG
CGCGACCGCTTTCTCCATTACTACCGCTGCTTTCTCCGCCACATTTACCCCAGCATCAACGCCGCTTATTATTTT
TCCATACTCGCTTTCAATCTCGCCTATTTATTCGACAAGTCCAAGTACCATAACCCTTTCATGTGGCTCATTGGC
ACCAGGCTGCGCAGAATGTCTGCTGCAGACTACCAGGCCATTGAGGCACAGGCAAAGAGACGGGTGTCCAAGCCC
GGTGCCCGACCCGGCGCCCGATCAATCTTGTCGCCAAGCAAGTGGGGATCCAAGGCCCTCTCGAGCTTGTCTATT
CTGCTGCCCATGAGTATATTTGCTCTCAAGTTCCTCGAATGGTGGTATCAGTCCGATTTTGCAAAGCAGCTCTCG
CACAAGACTGCCGAGAAGATTGAGCTGCCCCCTCCAATCATTTCTAGCGCCAGAGCAAATGACAAACCCGACACG
GCCGAGTCCTCCCGGGAAACAAGAGAGCAAGACCAAGATGCCGCGCCCGTGGAAATCTCGGCCCAAGAGGCACCC
ATTGCGGCGCAGTCCAGGCTGCCTATTCACGTTGTCCGGCCTCCGCGTGACTCAGCAGCGTGTCCGATATGTCAA
GACGACATTGTCACTCCAACAGTCTGCCAAACAGGCATTGTCTACTGCTACACGTGCATCCACAAATGGATCCAA
GGTGCACACGACAGGCAAGAAGCTTTCATGCAAGGCCGCCAAGGGAAATGGGAGAGTGGCCAAGGTCGATGTGCT
GTCACCGGGAAACGGCTGCTAGGCGGAACCCAAGGACTTAGGCGCATCATCATCTAG
Gene >OphauB2|1234
ATGACTGGCCATGCTCAACGCTTGCATGCAATCCATCAGCGACTGCATCTCGTCCCATCCGTCTCGACAGTCGCC
CACGACTTGGGCAAAGGCATCGTTGAGCTCTCGCCTGCCATGGAATTCGTCACGGCCCTCAGGGGCACCTTTGAC
GACAAGAAGCCCTCGCTCTTTGAGGTGTTTGCCGAACAGCAGCTCAATGGCCTCTTGCCACCGACGCTGCGATAC
CTGCTAACCGTGGCCACCCAGCGGTATCCGCGTTACCTGCTCCGAGCCCTCAACTCGTTTGACGAGCTGTACGCG
CTGGCAATGCTCGTGGTTGAGCGCCACTACTTGAGCACCTGCGGCGCTTCCTTTACAGAGCACTTTTACGGCCTC
AAGCGTGAAAAGTCGCTGAGGGGCGAGATTCCGCGCGCAAGTCTGGCAGCGCCGCATCTGGTTCGAGAGACGCTT
GGGCTGACGACGGCCGACGTGTGGAAAAACTTGGCTGTGCTGGTTGGCCTGCCCTACATCAAGAGGAAGCTTGAC
GAGGGCTACGATATCAATGCCCCTCGGGCCCTGCTCGGCGCGGCTTATACGCGCATGCCTGACGATGCAACATGG
CGCGACCGCTTTCTCCATTACTACCGCTGCTTTCTCCGCCACATTTACCCCAGCATCAACGCCGCTTATTATTTT
TCCATACTCGCTTTCAATCTCGCCTATTTATTCGACAAGTCCAAGTACCATAACCCTTTCATGTGGCTCATTGGC
ACCAGGCTGCGCAGAATGTCTGCTGCAGACTACCAGGCCATTGAGGCACAGGCAAAGAGACGGGTGTCCAAGCCC
GGTGCCCGACCCGGCGCCCGATCAATCTTGTCGCCAAGCAAGTGGGGATCCAAGGCCCTCTCGAGCTTGTCTATT
CTGCTGCCCATGAGTATATTTGCTCTCAAGTTCCTCGAATGGTGGTATCAGTCCGATTTTGCAAAGCAGCTCTCG
CACAAGACTGCCGAGAAGATTGAGCTGCCCCCTCCAATCATTTCTAGCGCCAGAGCAAATGACAAACCCGACACG
GCCGAGTCCTCCCGGGAAACAAGAGAGCAAGACCAAGATGCCGCGCCCGTGGAAATCTCGGCCCAAGAGGCACCC
ATTGCGGCGCAGTCCAGGCTGCCTATTCACGTTGTCCGGCCTCCGCGTGACTCAGCAGCGTGTCCGATATGTCAA
GACGACATTGTCACTCCAACAGTCTGCCAAACAGGCATTGTCTACTGCTACACGTGCATCCACAAATGGATCCAA
GGTGCACACGACAGGCAAGAAGCTTTCATGCAAGGCCGCCAAGGGAAATGGGAGAGTGGCCAAGGTCGATGTGCT
GTCACCGGGAAACGGCTGCTAGGCGGAACCCAAGGACTTAGGCGCATCATCATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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