Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|112
Gene name
LocationContig_1:289442..291242
Strand+
Gene length (bp)1800
Transcript length (bp)1800
Coding sequence length (bp)1800
Protein length (aa) 600

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13445 zf-RING_UBOX RING-type zinc-finger 4.1E-06 135 169
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 4.1E-05 135 183

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94271|YORN_SCHPO Uncharacterized RING finger protein P8B7.23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.23 PE=3 SV=1 44 512 2.0E-81
sp|Q06436|MAG2_YEAST RING-finger protein MAG2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAG2 PE=1 SV=1 6 428 3.0E-46
sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RNF10 PE=2 SV=1 80 320 1.0E-21
sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens GN=RNF10 PE=1 SV=2 80 312 4.0E-21
sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus musculus GN=Rnf10 PE=2 SV=2 80 306 8.0E-21
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Swissprot ID Swissprot Description Start End E-value
sp|O94271|YORN_SCHPO Uncharacterized RING finger protein P8B7.23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.23 PE=3 SV=1 44 512 2.0E-81
sp|Q06436|MAG2_YEAST RING-finger protein MAG2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAG2 PE=1 SV=1 6 428 3.0E-46
sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RNF10 PE=2 SV=1 80 320 1.0E-21
sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens GN=RNF10 PE=1 SV=2 80 312 4.0E-21
sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus musculus GN=Rnf10 PE=2 SV=2 80 306 8.0E-21
sp|Q5XI59|RNF10_RAT RING finger protein 10 OS=Rattus norvegicus GN=Rnf10 PE=2 SV=1 80 320 5.0E-20
sp|Q32NQ8|RNF10_XENLA RING finger protein 10 OS=Xenopus laevis GN=rnf10 PE=2 SV=1 80 310 6.0E-20
sp|Q5XI59|RNF10_RAT RING finger protein 10 OS=Rattus norvegicus GN=Rnf10 PE=2 SV=1 308 433 1.0E-13
sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus musculus GN=Rnf10 PE=2 SV=2 308 433 5.0E-13
sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RNF10 PE=2 SV=1 333 433 2.0E-12
sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens GN=RNF10 PE=1 SV=2 333 433 2.0E-12
sp|Q32NQ8|RNF10_XENLA RING finger protein 10 OS=Xenopus laevis GN=rnf10 PE=2 SV=1 296 444 1.0E-11
sp|P40072|SLX8_YEAST E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLX8 PE=1 SV=1 135 195 2.0E-07
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GO

GO Term Description Terminal node
GO:0046872 metal ion binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|112
MPRRSQGNRRQDEAQRRPGWGRRSDLTLNDYDAMAEDRAVGNASSRRGQTSITHLLSHSTLRPSLSHSYQTRSYR
SPPPWRVQATEKSRYVHANYRFVVSPEEKYPLQAKDADLFIDWPHVWQVLASSESQASTCPICLSEPPAPRMTKC
GHIFCLPCLIRFMHCEDESRPNKGARWKKCPLCEDPIYLHEVRPVRFFAGQESALPRVGEDVVLRLMARKANSTL
ALPWEGGTEALKWSHDVPWHFAANVLDYARIMKGTAEYMADQYDGEVAALLKQDKEDECFGQDGEWVQKAINAVY
AAKERIVVGAGNGQGALAQVKPKPGKQVAEADYYFYSSPPHLYLTPLDIRILKTKYGTFSNFPTTLLPRIEHIAT
GIVVDDALRKRNKYLGHLPRGCVISLLECDWTDIVPAETLETFSKDIEERRRRNREKAASEDRERIQAERLDALA
MRGSLGLQRPASPLQESPRMDPADFQPLSGATPPHARPGFAPLADVSTSPSPQRTVWGTRAVPSSPGLEAVASSP
TRRSTSDDGWLKDDEFLGTAELALQLEAIDALECNESAAGGASAATGGGGGKKGNKKKKKQKITLMSTGGRRGN*
Coding >OphauB2|112
ATGCCTAGACGAAGCCAGGGAAACCGGAGACAAGACGAGGCCCAGCGGCGTCCTGGTTGGGGCCGTAGAAGCGAC
CTGACGCTCAACGATTATGACGCAATGGCTGAGGACCGAGCCGTGGGCAATGCTTCGAGCAGGCGAGGCCAAACG
TCTATTACGCACCTGCTCAGCCACTCGACTCTGAGACCGTCGCTCAGTCACAGCTACCAGACGAGATCGTACCGC
AGTCCTCCGCCTTGGAGAGTGCAGGCAACAGAAAAGTCGAGATATGTTCACGCAAACTACCGATTCGTCGTTTCA
CCAGAAGAAAAGTACCCGTTACAGGCAAAGGATGCCGACTTGTTTATCGACTGGCCACATGTATGGCAAGTGCTT
GCCTCGTCGGAATCGCAGGCGTCGACGTGTCCCATTTGTCTATCGGAGCCACCTGCGCCTCGCATGACCAAGTGC
GGCCATATATTTTGCTTGCCCTGTCTGATTCGCTTTATGCACTGCGAGGACGAATCGCGACCAAACAAAGGCGCT
CGGTGGAAGAAGTGCCCGCTTTGCGAGGACCCCATCTATCTTCACGAGGTACGGCCCGTACGCTTCTTTGCTGGA
CAGGAAAGCGCACTACCACGGGTGGGAGAGGATGTTGTGCTTCGTCTGATGGCGAGAAAAGCAAACTCGACGCTG
GCGTTGCCCTGGGAAGGAGGGACAGAAGCGCTCAAATGGAGCCATGACGTTCCGTGGCACTTTGCCGCCAATGTC
TTGGACTATGCGCGCATCATGAAGGGAACGGCCGAGTACATGGCCGACCAGTATGATGGCGAGGTGGCAGCTCTT
TTGAAGCAAGACAAGGAAGACGAATGCTTTGGCCAAGACGGAGAATGGGTACAAAAGGCAATCAATGCCGTTTAC
GCGGCCAAGGAACGCATTGTTGTCGGCGCGGGCAATGGCCAAGGAGCTCTGGCACAAGTCAAGCCAAAGCCTGGC
AAGCAGGTTGCTGAAGCGGACTATTACTTTTACAGCTCGCCGCCACATCTCTATCTGACTCCTCTGGATATTCGT
ATCCTCAAGACCAAGTACGGCACATTTTCGAATTTCCCCACCACTCTGTTGCCGAGAATCGAGCACATTGCCACG
GGCATCGTGGTGGACGACGCACTGCGCAAGCGCAACAAGTATCTCGGCCACCTTCCTCGCGGCTGTGTCATTAGC
CTCCTCGAATGTGACTGGACCGACATTGTTCCTGCCGAGACGCTTGAGACGTTTTCCAAGGACATTGAGGAGCGC
CGGCGGCGGAACCGCGAAAAGGCAGCGTCGGAGGATCGTGAGCGGATACAGGCTGAGCGGCTCGACGCGCTGGCT
ATGCGAGGATCCTTGGGCTTGCAAAGACCAGCCTCGCCACTGCAAGAGTCGCCGCGGATGGACCCTGCCGACTTT
CAGCCCCTGAGCGGAGCGACGCCGCCCCATGCACGGCCCGGCTTTGCGCCGCTGGCAGACGTGTCGACGAGTCCG
TCGCCGCAGCGGACCGTGTGGGGAACGCGGGCGGTGCCCTCATCGCCGGGCCTGGAAGCCGTGGCATCGTCGCCG
ACACGACGCAGCACCTCTGACGATGGCTGGCTCAAGGATGATGAGTTTTTGGGCACGGCAGAGCTGGCGCTGCAG
CTAGAGGCGATTGACGCGCTGGAATGCAATGAGTCTGCAGCGGGAGGAGCATCGGCGGCAACGGGTGGTGGTGGA
GGGAAAAAGGGCAACAAGAAGAAGAAGAAGCAAAAGATTACGCTCATGAGCACTGGCGGGCGAAGAGGCAACTAG
Transcript >OphauB2|112
ATGCCTAGACGAAGCCAGGGAAACCGGAGACAAGACGAGGCCCAGCGGCGTCCTGGTTGGGGCCGTAGAAGCGAC
CTGACGCTCAACGATTATGACGCAATGGCTGAGGACCGAGCCGTGGGCAATGCTTCGAGCAGGCGAGGCCAAACG
TCTATTACGCACCTGCTCAGCCACTCGACTCTGAGACCGTCGCTCAGTCACAGCTACCAGACGAGATCGTACCGC
AGTCCTCCGCCTTGGAGAGTGCAGGCAACAGAAAAGTCGAGATATGTTCACGCAAACTACCGATTCGTCGTTTCA
CCAGAAGAAAAGTACCCGTTACAGGCAAAGGATGCCGACTTGTTTATCGACTGGCCACATGTATGGCAAGTGCTT
GCCTCGTCGGAATCGCAGGCGTCGACGTGTCCCATTTGTCTATCGGAGCCACCTGCGCCTCGCATGACCAAGTGC
GGCCATATATTTTGCTTGCCCTGTCTGATTCGCTTTATGCACTGCGAGGACGAATCGCGACCAAACAAAGGCGCT
CGGTGGAAGAAGTGCCCGCTTTGCGAGGACCCCATCTATCTTCACGAGGTACGGCCCGTACGCTTCTTTGCTGGA
CAGGAAAGCGCACTACCACGGGTGGGAGAGGATGTTGTGCTTCGTCTGATGGCGAGAAAAGCAAACTCGACGCTG
GCGTTGCCCTGGGAAGGAGGGACAGAAGCGCTCAAATGGAGCCATGACGTTCCGTGGCACTTTGCCGCCAATGTC
TTGGACTATGCGCGCATCATGAAGGGAACGGCCGAGTACATGGCCGACCAGTATGATGGCGAGGTGGCAGCTCTT
TTGAAGCAAGACAAGGAAGACGAATGCTTTGGCCAAGACGGAGAATGGGTACAAAAGGCAATCAATGCCGTTTAC
GCGGCCAAGGAACGCATTGTTGTCGGCGCGGGCAATGGCCAAGGAGCTCTGGCACAAGTCAAGCCAAAGCCTGGC
AAGCAGGTTGCTGAAGCGGACTATTACTTTTACAGCTCGCCGCCACATCTCTATCTGACTCCTCTGGATATTCGT
ATCCTCAAGACCAAGTACGGCACATTTTCGAATTTCCCCACCACTCTGTTGCCGAGAATCGAGCACATTGCCACG
GGCATCGTGGTGGACGACGCACTGCGCAAGCGCAACAAGTATCTCGGCCACCTTCCTCGCGGCTGTGTCATTAGC
CTCCTCGAATGTGACTGGACCGACATTGTTCCTGCCGAGACGCTTGAGACGTTTTCCAAGGACATTGAGGAGCGC
CGGCGGCGGAACCGCGAAAAGGCAGCGTCGGAGGATCGTGAGCGGATACAGGCTGAGCGGCTCGACGCGCTGGCT
ATGCGAGGATCCTTGGGCTTGCAAAGACCAGCCTCGCCACTGCAAGAGTCGCCGCGGATGGACCCTGCCGACTTT
CAGCCCCTGAGCGGAGCGACGCCGCCCCATGCACGGCCCGGCTTTGCGCCGCTGGCAGACGTGTCGACGAGTCCG
TCGCCGCAGCGGACCGTGTGGGGAACGCGGGCGGTGCCCTCATCGCCGGGCCTGGAAGCCGTGGCATCGTCGCCG
ACACGACGCAGCACCTCTGACGATGGCTGGCTCAAGGATGATGAGTTTTTGGGCACGGCAGAGCTGGCGCTGCAG
CTAGAGGCGATTGACGCGCTGGAATGCAATGAGTCTGCAGCGGGAGGAGCATCGGCGGCAACGGGTGGTGGTGGA
GGGAAAAAGGGCAACAAGAAGAAGAAGAAGCAAAAGATTACGCTCATGAGCACTGGCGGGCGAAGAGGCAACTAG
Gene >OphauB2|112
ATGCCTAGACGAAGCCAGGGAAACCGGAGACAAGACGAGGCCCAGCGGCGTCCTGGTTGGGGCCGTAGAAGCGAC
CTGACGCTCAACGATTATGACGCAATGGCTGAGGACCGAGCCGTGGGCAATGCTTCGAGCAGGCGAGGCCAAACG
TCTATTACGCACCTGCTCAGCCACTCGACTCTGAGACCGTCGCTCAGTCACAGCTACCAGACGAGATCGTACCGC
AGTCCTCCGCCTTGGAGAGTGCAGGCAACAGAAAAGTCGAGATATGTTCACGCAAACTACCGATTCGTCGTTTCA
CCAGAAGAAAAGTACCCGTTACAGGCAAAGGATGCCGACTTGTTTATCGACTGGCCACATGTATGGCAAGTGCTT
GCCTCGTCGGAATCGCAGGCGTCGACGTGTCCCATTTGTCTATCGGAGCCACCTGCGCCTCGCATGACCAAGTGC
GGCCATATATTTTGCTTGCCCTGTCTGATTCGCTTTATGCACTGCGAGGACGAATCGCGACCAAACAAAGGCGCT
CGGTGGAAGAAGTGCCCGCTTTGCGAGGACCCCATCTATCTTCACGAGGTACGGCCCGTACGCTTCTTTGCTGGA
CAGGAAAGCGCACTACCACGGGTGGGAGAGGATGTTGTGCTTCGTCTGATGGCGAGAAAAGCAAACTCGACGCTG
GCGTTGCCCTGGGAAGGAGGGACAGAAGCGCTCAAATGGAGCCATGACGTTCCGTGGCACTTTGCCGCCAATGTC
TTGGACTATGCGCGCATCATGAAGGGAACGGCCGAGTACATGGCCGACCAGTATGATGGCGAGGTGGCAGCTCTT
TTGAAGCAAGACAAGGAAGACGAATGCTTTGGCCAAGACGGAGAATGGGTACAAAAGGCAATCAATGCCGTTTAC
GCGGCCAAGGAACGCATTGTTGTCGGCGCGGGCAATGGCCAAGGAGCTCTGGCACAAGTCAAGCCAAAGCCTGGC
AAGCAGGTTGCTGAAGCGGACTATTACTTTTACAGCTCGCCGCCACATCTCTATCTGACTCCTCTGGATATTCGT
ATCCTCAAGACCAAGTACGGCACATTTTCGAATTTCCCCACCACTCTGTTGCCGAGAATCGAGCACATTGCCACG
GGCATCGTGGTGGACGACGCACTGCGCAAGCGCAACAAGTATCTCGGCCACCTTCCTCGCGGCTGTGTCATTAGC
CTCCTCGAATGTGACTGGACCGACATTGTTCCTGCCGAGACGCTTGAGACGTTTTCCAAGGACATTGAGGAGCGC
CGGCGGCGGAACCGCGAAAAGGCAGCGTCGGAGGATCGTGAGCGGATACAGGCTGAGCGGCTCGACGCGCTGGCT
ATGCGAGGATCCTTGGGCTTGCAAAGACCAGCCTCGCCACTGCAAGAGTCGCCGCGGATGGACCCTGCCGACTTT
CAGCCCCTGAGCGGAGCGACGCCGCCCCATGCACGGCCCGGCTTTGCGCCGCTGGCAGACGTGTCGACGAGTCCG
TCGCCGCAGCGGACCGTGTGGGGAACGCGGGCGGTGCCCTCATCGCCGGGCCTGGAAGCCGTGGCATCGTCGCCG
ACACGACGCAGCACCTCTGACGATGGCTGGCTCAAGGATGATGAGTTTTTGGGCACGGCAGAGCTGGCGCTGCAG
CTAGAGGCGATTGACGCGCTGGAATGCAATGAGTCTGCAGCGGGAGGAGCATCGGCGGCAACGGGTGGTGGTGGA
GGGAAAAAGGGCAACAAGAAGAAGAAGAAGCAAAAGATTACGCTCATGAGCACTGGCGGGCGAAGAGGCAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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