© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1070 |
| Gene name | |
| Location | Contig_125:382..1786 |
| Strand | + |
| Gene length (bp) | 1404 |
| Transcript length (bp) | 1404 |
| Coding sequence length (bp) | 1404 |
| Protein length (aa) | 468 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 8.2E-24 | 177 | 369 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 153 | 459 | 8.0E-45 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 155 | 464 | 5.0E-43 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 161 | 451 | 3.0E-42 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 161 | 451 | 2.0E-41 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 161 | 451 | 2.0E-40 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q6Z7K5|MTP3_ORYSJ | Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1 | 153 | 459 | 8.0E-45 |
| sp|Q5NA18|MTP5_ORYSJ | Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1 | 155 | 464 | 5.0E-43 |
| sp|Q9SAJ7|MTP9_ARATH | Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2 | 161 | 451 | 3.0E-42 |
| sp|Q0WU02|MTP10_ARATH | Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1 | 161 | 451 | 2.0E-41 |
| sp|Q9LDU0|MTP7_ORYSJ | Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1 | 161 | 451 | 2.0E-40 |
| sp|Q10PP8|MTP4_ORYSJ | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1 | 169 | 451 | 3.0E-40 |
| sp|Q9M2P2|MTPC3_ARATH | Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2 | 174 | 451 | 6.0E-39 |
| sp|O80632|MTP11_ARATH | Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1 | 155 | 461 | 2.0E-36 |
| sp|Q0DHJ5|MTP6_ORYSJ | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2 | 155 | 461 | 7.0E-29 |
| sp|A8AL14|FIEF_CITK8 | Cation-efflux pump FieF OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fieF PE=3 SV=1 | 174 | 433 | 8.0E-08 |
| sp|Q8RR17|FIEF_KLEPN | Cation-efflux pump FieF OS=Klebsiella pneumoniae GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-07 |
| sp|A6TGB7|FIEF_KLEP7 | Cation-efflux pump FieF OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-07 |
| sp|B5XZ41|FIEF_KLEP3 | Cation-efflux pump FieF OS=Klebsiella pneumoniae (strain 342) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-07 |
| sp|B4TPS5|FIEF_SALSV | Cation-efflux pump FieF OS=Salmonella schwarzengrund (strain CVM19633) GN=fieF PE=3 SV=1 | 185 | 433 | 1.0E-06 |
| sp|Q57HF4|FIEF_SALCH | Cation-efflux pump FieF OS=Salmonella choleraesuis (strain SC-B67) GN=fieF PE=3 SV=1 | 174 | 433 | 1.0E-06 |
| sp|Q8ZKR4|FIEF_SALTY | Cation-efflux pump FieF OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|C0Q413|FIEF_SALPC | Cation-efflux pump FieF OS=Salmonella paratyphi C (strain RKS4594) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|A9MZE6|FIEF_SALPB | Cation-efflux pump FieF OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|B4T048|FIEF_SALNS | Cation-efflux pump FieF OS=Salmonella newport (strain SL254) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|B4TCJ9|FIEF_SALHS | Cation-efflux pump FieF OS=Salmonella heidelberg (strain SL476) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|B5RFB0|FIEF_SALG2 | Cation-efflux pump FieF OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|B5QWZ4|FIEF_SALEP | Cation-efflux pump FieF OS=Salmonella enteritidis PT4 (strain P125109) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|B5FPR1|FIEF_SALDC | Cation-efflux pump FieF OS=Salmonella dublin (strain CT_02021853) GN=fieF PE=3 SV=1 | 185 | 433 | 3.0E-06 |
| sp|A9MI51|FIEF_SALAR | Cation-efflux pump FieF OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=fieF PE=3 SV=1 | 189 | 433 | 4.0E-06 |
| sp|Q8Z2W4|FIEF_SALTI | Cation-efflux pump FieF OS=Salmonella typhi GN=fieF PE=3 SV=1 | 185 | 433 | 5.0E-06 |
| sp|B7LVD0|FIEF_ESCF3 | Ferrous-iron efflux pump FieF OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fieF PE=3 SV=1 | 184 | 433 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0009987 | cellular process | No |
| GO:0022857 | transmembrane transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 172 | 194 | 22 |
| 2 | 209 | 226 | 17 |
| 3 | 246 | 263 | 17 |
| 4 | 278 | 300 | 22 |
| 5 | 321 | 343 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1070 MAGECTDGGTVHAMNQRLAASSRPRRWHRTNKIENARPKRSSRGNGLFGFHDAVPTAIDDARREALKHKLKQGID HDALEKFRKSDAELKAMRSKGLRAFYTAQNERINDWIEVDAVVMALADHVLESMDPDPDHDGDLERGGALQRVAG NIGELLPDGEKQRRRRAAKMAAWAININVVANVLLLVGKGFAALTTGSLSLLASLVDSALDLLCTLIVWTTNRLV LWRLNGLRKRFPVGRRRLEPLGILVFSVIMIISFLQILKESVERLMRGSGEAEALGAAAVASLVATIALKGVIGL ICRRVKTTQVQALVQDCKTDVIFNSLSLLFPLAGHAFDAWWLDPLGAALLSLFIVYDWGRTSLDNVVRLSGEAAC DGTFRKLVYLAYRFGPAVDGFKSITAYHAGDGVWAEFDVLLHGDTRLRSSHDVAETLQYCAEGLSEVDRAFVTTD YAAIGPTGHAQDSEWNH* |
| Coding | >OphauB2|1070 ATGGCGGGCGAATGCACAGACGGTGGCACCGTGCATGCAATGAACCAGCGTCTTGCCGCCTCGTCGCGGCCCCGG CGATGGCATCGCACCAACAAGATTGAAAATGCGCGACCAAAGCGAAGCAGCCGTGGCAATGGCCTGTTTGGCTTC CACGACGCGGTGCCAACCGCCATTGACGACGCCCGGCGCGAAGCACTCAAGCACAAGCTCAAACAAGGCATCGAC CACGACGCGCTGGAGAAGTTTCGCAAGTCGGATGCCGAGCTCAAGGCGATGCGCAGCAAGGGCCTCCGCGCATTC TACACGGCGCAGAATGAGAGAATCAACGATTGGATCGAAGTGGATGCCGTCGTCATGGCCCTGGCCGACCATGTC CTCGAGTCGATGGATCCAGACCCCGACCACGACGGCGACTTGGAGCGCGGCGGCGCACTCCAGCGCGTTGCGGGC AATATTGGCGAGCTGCTGCCCGACGGGGAAAAGCAGCGGCGACGACGCGCGGCCAAGATGGCGGCGTGGGCCATT AATATAAACGTGGTGGCCAATGTGCTGCTGCTGGTGGGCAAGGGCTTTGCCGCGCTGACAACGGGGTCTCTGTCG CTGCTGGCGTCGCTTGTCGACTCGGCTCTTGATTTGCTGTGTACGCTCATTGTATGGACGACGAATCGGCTCGTG CTCTGGCGGCTTAATGGCTTGCGCAAGCGCTTTCCCGTTGGACGCCGCCGTTTGGAGCCGCTGGGCATCCTCGTA TTTTCCGTCATTATGATTATTTCCTTTCTGCAGATTCTTAAGGAGTCTGTTGAGCGCCTGATGCGCGGCAGCGGC GAGGCTGAAGCACTGGGTGCTGCTGCTGTGGCTTCCCTCGTCGCCACCATTGCTCTCAAGGGCGTCATTGGGCTC ATTTGCCGTCGCGTCAAGACGACGCAGGTGCAAGCCCTGGTACAAGACTGCAAGACGGATGTCATATTCAACTCG CTCTCTCTCCTCTTCCCCCTCGCCGGCCACGCCTTTGACGCATGGTGGCTTGATCCCCTGGGCGCCGCCCTGCTG TCACTCTTCATCGTCTACGACTGGGGCCGCACATCCTTGGACAACGTGGTGCGGCTATCCGGCGAGGCGGCATGC GACGGCACCTTTCGCAAGCTTGTCTACTTGGCCTATCGCTTTGGCCCCGCCGTCGATGGCTTCAAGAGCATCACG GCCTACCATGCGGGCGACGGCGTGTGGGCCGAGTTTGATGTGCTGCTGCATGGCGATACGCGCCTACGTTCGTCG CACGATGTGGCTGAGACGCTGCAGTACTGCGCCGAGGGGCTTTCCGAGGTGGACAGGGCTTTTGTCACGACCGAC TATGCTGCCATTGGGCCCACGGGACATGCGCAAGACTCGGAGTGGAATCATTGA |
| Transcript | >OphauB2|1070 ATGGCGGGCGAATGCACAGACGGTGGCACCGTGCATGCAATGAACCAGCGTCTTGCCGCCTCGTCGCGGCCCCGG CGATGGCATCGCACCAACAAGATTGAAAATGCGCGACCAAAGCGAAGCAGCCGTGGCAATGGCCTGTTTGGCTTC CACGACGCGGTGCCAACCGCCATTGACGACGCCCGGCGCGAAGCACTCAAGCACAAGCTCAAACAAGGCATCGAC CACGACGCGCTGGAGAAGTTTCGCAAGTCGGATGCCGAGCTCAAGGCGATGCGCAGCAAGGGCCTCCGCGCATTC TACACGGCGCAGAATGAGAGAATCAACGATTGGATCGAAGTGGATGCCGTCGTCATGGCCCTGGCCGACCATGTC CTCGAGTCGATGGATCCAGACCCCGACCACGACGGCGACTTGGAGCGCGGCGGCGCACTCCAGCGCGTTGCGGGC AATATTGGCGAGCTGCTGCCCGACGGGGAAAAGCAGCGGCGACGACGCGCGGCCAAGATGGCGGCGTGGGCCATT AATATAAACGTGGTGGCCAATGTGCTGCTGCTGGTGGGCAAGGGCTTTGCCGCGCTGACAACGGGGTCTCTGTCG CTGCTGGCGTCGCTTGTCGACTCGGCTCTTGATTTGCTGTGTACGCTCATTGTATGGACGACGAATCGGCTCGTG CTCTGGCGGCTTAATGGCTTGCGCAAGCGCTTTCCCGTTGGACGCCGCCGTTTGGAGCCGCTGGGCATCCTCGTA TTTTCCGTCATTATGATTATTTCCTTTCTGCAGATTCTTAAGGAGTCTGTTGAGCGCCTGATGCGCGGCAGCGGC GAGGCTGAAGCACTGGGTGCTGCTGCTGTGGCTTCCCTCGTCGCCACCATTGCTCTCAAGGGCGTCATTGGGCTC ATTTGCCGTCGCGTCAAGACGACGCAGGTGCAAGCCCTGGTACAAGACTGCAAGACGGATGTCATATTCAACTCG CTCTCTCTCCTCTTCCCCCTCGCCGGCCACGCCTTTGACGCATGGTGGCTTGATCCCCTGGGCGCCGCCCTGCTG TCACTCTTCATCGTCTACGACTGGGGCCGCACATCCTTGGACAACGTGGTGCGGCTATCCGGCGAGGCGGCATGC GACGGCACCTTTCGCAAGCTTGTCTACTTGGCCTATCGCTTTGGCCCCGCCGTCGATGGCTTCAAGAGCATCACG GCCTACCATGCGGGCGACGGCGTGTGGGCCGAGTTTGATGTGCTGCTGCATGGCGATACGCGCCTACGTTCGTCG CACGATGTGGCTGAGACGCTGCAGTACTGCGCCGAGGGGCTTTCCGAGGTGGACAGGGCTTTTGTCACGACCGAC TATGCTGCCATTGGGCCCACGGGACATGCGCAAGACTCGGAGTGGAATCATTGA |
| Gene | >OphauB2|1070 ATGGCGGGCGAATGCACAGACGGTGGCACCGTGCATGCAATGAACCAGCGTCTTGCCGCCTCGTCGCGGCCCCGG CGATGGCATCGCACCAACAAGATTGAAAATGCGCGACCAAAGCGAAGCAGCCGTGGCAATGGCCTGTTTGGCTTC CACGACGCGGTGCCAACCGCCATTGACGACGCCCGGCGCGAAGCACTCAAGCACAAGCTCAAACAAGGCATCGAC CACGACGCGCTGGAGAAGTTTCGCAAGTCGGATGCCGAGCTCAAGGCGATGCGCAGCAAGGGCCTCCGCGCATTC TACACGGCGCAGAATGAGAGAATCAACGATTGGATCGAAGTGGATGCCGTCGTCATGGCCCTGGCCGACCATGTC CTCGAGTCGATGGATCCAGACCCCGACCACGACGGCGACTTGGAGCGCGGCGGCGCACTCCAGCGCGTTGCGGGC AATATTGGCGAGCTGCTGCCCGACGGGGAAAAGCAGCGGCGACGACGCGCGGCCAAGATGGCGGCGTGGGCCATT AATATAAACGTGGTGGCCAATGTGCTGCTGCTGGTGGGCAAGGGCTTTGCCGCGCTGACAACGGGGTCTCTGTCG CTGCTGGCGTCGCTTGTCGACTCGGCTCTTGATTTGCTGTGTACGCTCATTGTATGGACGACGAATCGGCTCGTG CTCTGGCGGCTTAATGGCTTGCGCAAGCGCTTTCCCGTTGGACGCCGCCGTTTGGAGCCGCTGGGCATCCTCGTA TTTTCCGTCATTATGATTATTTCCTTTCTGCAGATTCTTAAGGAGTCTGTTGAGCGCCTGATGCGCGGCAGCGGC GAGGCTGAAGCACTGGGTGCTGCTGCTGTGGCTTCCCTCGTCGCCACCATTGCTCTCAAGGGCGTCATTGGGCTC ATTTGCCGTCGCGTCAAGACGACGCAGGTGCAAGCCCTGGTACAAGACTGCAAGACGGATGTCATATTCAACTCG CTCTCTCTCCTCTTCCCCCTCGCCGGCCACGCCTTTGACGCATGGTGGCTTGATCCCCTGGGCGCCGCCCTGCTG TCACTCTTCATCGTCTACGACTGGGGCCGCACATCCTTGGACAACGTGGTGCGGCTATCCGGCGAGGCGGCATGC GACGGCACCTTTCGCAAGCTTGTCTACTTGGCCTATCGCTTTGGCCCCGCCGTCGATGGCTTCAAGAGCATCACG GCCTACCATGCGGGCGACGGCGTGTGGGCCGAGTTTGATGTGCTGCTGCATGGCGATACGCGCCTACGTTCGTCG CACGATGTGGCTGAGACGCTGCAGTACTGCGCCGAGGGGCTTTCCGAGGTGGACAGGGCTTTTGTCACGACCGAC TATGCTGCCATTGGGCCCACGGGACATGCGCAAGACTCGGAGTGGAATCATTGA |