Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1030
Gene name
LocationContig_123:17029..17470
Strand-
Gene length (bp)441
Transcript length (bp)381
Coding sequence length (bp)381
Protein length (aa) 127

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08555 FAM32A FAM32A 2.5E-11 5 85

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q92363|YEJL_SCHPO Uncharacterized protein C31G5.21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=N118 PE=4 SV=1 64 126 9.0E-09

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1831
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5588
Ophiocordyceps australis map64 (Brazil) OphauB2|1030 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|06763
Ophiocordyceps camponoti-rufipedis Ophun1|5759
Ophiocordyceps kimflemingae Ophio5|1412
Ophiocordyceps subramaniannii Hirsu2|182

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1030
MPSDDYAAVGGGALKLKGAKVHKKGSKKKSKAKSSLEKTLSVGQASDEQHDAVNDEAHNDSETSVVLKTESERRH
DEARKKRLLQMTQATGLRPELLKTHKERVEELNTYLSKLSEHHDMPKIGPG*
Coding >OphauB2|1030
ATGCCTTCAGACGACTATGCAGCCGTGGGCGGCGGTGCCTTGAAGCTCAAGGGCGCCAAGGTGCATAAAAAGGGG
TCCAAGAAGAAGAGCAAGGCCAAGAGCAGTCTTGAAAAGACTCTGTCTGTCGGCCAAGCCAGCGACGAGCAACAC
GATGCCGTCAACGACGAAGCCCATAACGACTCTGAGACGTCAGTCGTGCTCAAGACCGAGTCGGAGCGACGCCAC
GACGAGGCCAGGAAAAAGCGATTGCTTCAGATGACCCAGGCAACGGGCCTGAGGCCTGAGTTGCTAAAAACACAC
AAGGAGCGCGTCGAGGAGCTCAACACCTATCTTTCCAAGCTCAGCGAACATCATGACATGCCCAAGATTGGCCCC
GGCTGA
Transcript >OphauB2|1030
ATGCCTTCAGACGACTATGCAGCCGTGGGCGGCGGTGCCTTGAAGCTCAAGGGCGCCAAGGTGCATAAAAAGGGG
TCCAAGAAGAAGAGCAAGGCCAAGAGCAGTCTTGAAAAGACTCTGTCTGTCGGCCAAGCCAGCGACGAGCAACAC
GATGCCGTCAACGACGAAGCCCATAACGACTCTGAGACGTCAGTCGTGCTCAAGACCGAGTCGGAGCGACGCCAC
GACGAGGCCAGGAAAAAGCGATTGCTTCAGATGACCCAGGCAACGGGCCTGAGGCCTGAGTTGCTAAAAACACAC
AAGGAGCGCGTCGAGGAGCTCAACACCTATCTTTCCAAGCTCAGCGAACATCATGACATGCCCAAGATTGGCCCC
GGCTGA
Gene >OphauB2|1030
ATGCCTTCAGACGACTATGCAGCCGTGGGCGGCGGTGCCTTGAAGCTCAAGGGCGCCAAGGTGCATAAAAAGGGG
TCCAAGAAGAAGAGCAAGGCCAAGAGCAGTCTTGAAAAGACTCTGTCTGTCGGCCAAGCCAGCGACGAGCAACAC
GATGCCGTCAACGACGAAGCCCATAACGACTCTGAGACGTCAGTCGTGCTCAAGACCGAGTCGGAGCGACGCCAC
GACGAGGCCAGGAAAAAGCGAGTGAGTCCGCCGCGTCTCGCGCTGCTACATGCCCTGTCAAACTGACAAGCCATC
GCACAGTTGCTTCAGATGACCCAGGCAACGGGCCTGAGGCCTGAGTTGCTAAAAACACACAAGGAGCGCGTCGAG
GAGCTCAACACCTATCTTTCCAAGCTCAGCGAACATCATGACATGCCCAAGATTGGCCCCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail