Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1009
Gene name
LocationContig_122:26984..28024
Strand+
Gene length (bp)1040
Transcript length (bp)909
Coding sequence length (bp)909
Protein length (aa) 303

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02678 Pirin Pirin 4.3E-29 22 120
PF05726 Pirin_C Pirin C-terminal cupin domain 3.3E-23 177 284

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O00625|PIR_HUMAN Pirin OS=Homo sapiens GN=PIR PE=1 SV=1 1 297 4.0E-87
sp|Q9D711|PIR_MOUSE Pirin OS=Mus musculus GN=Pir PE=1 SV=1 1 297 2.0E-84
sp|Q5M827|PIR_RAT Pirin OS=Rattus norvegicus GN=Pir PE=1 SV=1 1 297 3.0E-83
sp|Q9SEE4|PIRL_SOLLC Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1 1 295 3.0E-83
sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1 5 301 5.0E-78
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Swissprot ID Swissprot Description Start End E-value
sp|O00625|PIR_HUMAN Pirin OS=Homo sapiens GN=PIR PE=1 SV=1 1 297 4.0E-87
sp|Q9D711|PIR_MOUSE Pirin OS=Mus musculus GN=Pir PE=1 SV=1 1 297 2.0E-84
sp|Q5M827|PIR_RAT Pirin OS=Rattus norvegicus GN=Pir PE=1 SV=1 1 297 3.0E-83
sp|Q9SEE4|PIRL_SOLLC Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1 1 295 3.0E-83
sp|Q9LPS9|PRNL1_ARATH Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590 PE=2 SV=1 5 301 5.0E-78
sp|Q9ZW82|PRNL2_ARATH Pirin-like protein At2g43120 OS=Arabidopsis thaliana GN=At2g43120 PE=2 SV=3 3 295 2.0E-76
sp|Q9LX49|PRN1_ARATH Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1 2 290 7.0E-70
sp|Q9LX45|PRNL4_ARATH Putative pirin-like protein At3g59260 OS=Arabidopsis thaliana GN=At3g59260 PE=3 SV=1 38 295 1.0E-67
sp|P58112|Y481_CAUCR Pirin-like protein CC_0481 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=CC_0481 PE=3 SV=1 5 280 3.0E-48
sp|Q9HZ00|Y3240_PSEAE Putative quercetin 2,3-dioxygenase PA3240 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA3240 PE=3 SV=1 17 280 3.0E-46
sp|Q9KKY1|Y3769_VIBCH Putative quercetin 2,3-dioxygenase VC_A0969 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=VC_A0969 PE=3 SV=1 1 281 1.0E-37
sp|Q9I163|Y2418_PSEAE Putative quercetin 2,3-dioxygenase PA2418 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA2418 PE=3 SV=1 35 281 7.0E-36
sp|Q9HLU2|Y133_THEAC Putative quercetin 2,3-dioxygenase Ta0133 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=Ta0133 PE=3 SV=1 52 281 1.0E-35
sp|P58114|Y3178_CAUCR Pirin-like protein CC_3178 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=CC_3178 PE=3 SV=1 38 281 9.0E-19
sp|Q9CKD7|Y1685_PASMU Putative quercetin 2,3-dioxygenase PM1685 OS=Pasteurella multocida (strain Pm70) GN=PM1685 PE=3 SV=1 35 134 4.0E-14
sp|Q9I4C8|Y1210_PSEAE Putative quercetin 2,3-dioxygenase PA1210 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1210 PE=3 SV=1 46 207 4.0E-14
sp|P65725|Y187_MYCBO Putative quercetin 2,3-dioxygenase Mb0187c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0187c PE=3 SV=1 47 215 2.0E-13
sp|P9WI85|Y181_MYCTU Putative quercetin 2,3-dioxygenase Rv0181c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0181c PE=1 SV=1 47 215 2.0E-13
sp|P9WI84|Y181_MYCTO Putative quercetin 2,3-dioxygenase MT0190 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0190 PE=3 SV=1 47 215 2.0E-13
sp|P73623|Y1773_SYNY3 Putative quercetin 2,3-dioxygenase sll1773 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1773 PE=3 SV=1 35 134 2.0E-13
sp|P58116|YHHW_ECO57 Quercetin 2,3-dioxygenase OS=Escherichia coli O157:H7 GN=yhhW PE=3 SV=1 36 137 5.0E-13
sp|P46852|YHHW_ECOLI Quercetin 2,3-dioxygenase OS=Escherichia coli (strain K12) GN=yhhW PE=1 SV=1 36 137 5.0E-13
sp|Q9XBR7|Y1337_ZYMMO Putative quercetin 2,3-dioxygenase ZMO1337 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) GN=ZMO1337 PE=3 SV=1 47 120 1.0E-12
sp|P58113|Y1473_CAUCR Pirin-like protein CC_1473 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=CC_1473 PE=3 SV=1 35 121 2.0E-12
sp|Q9I4D3|Y1205_PSEAE Putative quercetin 2,3-dioxygenase PA1205 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1205 PE=3 SV=1 19 288 2.0E-12
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1009
MSIPRSISKVLLAVEQAEGAGARVRRSIGTSRVPNFSPFLMLDHFSIKPGAGFPDHPHRGQETITYLLDGGVEHE
DFAGNRGSLGPGDLQFMTAGRGIVHAEMPCQNPDGRPNVGLQLWVDLPRHLKDCEPRYRDLRAQEVPSINVDNDR
ATIKIISGRSHGVDSVKDLAYTPVWILDITLRPGARVHQPLPAGWSAFAYILQGSVSFGTPDALRKVQQFHNVFF
DSNGDFVHVESDKHATKPSRLVLVAGTPLDQDIVQYGPFVLTSKQGVYQALADYQSCSNGFERAQNWKSEIAKTM
AS*
Coding >OphauB2|1009
ATGTCCATTCCACGCAGCATTTCCAAGGTGCTTCTGGCCGTTGAGCAAGCTGAAGGCGCCGGTGCACGCGTCCGC
CGCTCAATAGGCACATCGCGCGTCCCCAACTTTTCGCCTTTTCTCATGCTCGATCACTTTTCCATCAAGCCCGGT
GCCGGCTTTCCTGACCACCCCCATAGAGGCCAGGAAACAATAACCTACCTCCTCGATGGCGGCGTCGAGCACGAA
GACTTTGCCGGAAATCGCGGCTCCCTTGGCCCAGGCGACCTCCAGTTCATGACGGCCGGCCGTGGCATCGTCCAC
GCCGAAATGCCTTGCCAAAACCCCGACGGCCGTCCCAACGTCGGGCTCCAACTATGGGTGGACTTGCCTCGTCAC
CTCAAGGATTGCGAGCCACGATATCGGGATTTGCGCGCCCAAGAAGTCCCTTCCATCAACGTTGATAATGACCGC
GCTACCATCAAGATTATTTCAGGCCGCAGCCATGGCGTCGACTCGGTCAAGGACCTTGCTTACACTCCCGTCTGG
ATTCTCGATATTACTCTTCGTCCCGGCGCCCGTGTTCATCAGCCCTTGCCCGCTGGCTGGTCCGCTTTTGCCTAT
ATCCTCCAGGGCTCCGTCTCTTTTGGCACCCCAGACGCCCTGCGCAAAGTCCAGCAGTTTCACAACGTCTTTTTC
GACTCAAACGGTGACTTTGTTCATGTCGAGTCGGACAAGCATGCCACCAAGCCCAGTCGTCTAGTCCTAGTTGCC
GGAACTCCCCTCGACCAGGATATCGTTCAATATGGACCCTTTGTTCTGACCTCTAAACAAGGTGTCTACCAGGCT
CTTGCTGATTACCAATCTTGCTCCAATGGGTTTGAGCGTGCTCAAAATTGGAAGAGCGAGATCGCCAAGACAATG
GCCAGTTAA
Transcript >OphauB2|1009
ATGTCCATTCCACGCAGCATTTCCAAGGTGCTTCTGGCCGTTGAGCAAGCTGAAGGCGCCGGTGCACGCGTCCGC
CGCTCAATAGGCACATCGCGCGTCCCCAACTTTTCGCCTTTTCTCATGCTCGATCACTTTTCCATCAAGCCCGGT
GCCGGCTTTCCTGACCACCCCCATAGAGGCCAGGAAACAATAACCTACCTCCTCGATGGCGGCGTCGAGCACGAA
GACTTTGCCGGAAATCGCGGCTCCCTTGGCCCAGGCGACCTCCAGTTCATGACGGCCGGCCGTGGCATCGTCCAC
GCCGAAATGCCTTGCCAAAACCCCGACGGCCGTCCCAACGTCGGGCTCCAACTATGGGTGGACTTGCCTCGTCAC
CTCAAGGATTGCGAGCCACGATATCGGGATTTGCGCGCCCAAGAAGTCCCTTCCATCAACGTTGATAATGACCGC
GCTACCATCAAGATTATTTCAGGCCGCAGCCATGGCGTCGACTCGGTCAAGGACCTTGCTTACACTCCCGTCTGG
ATTCTCGATATTACTCTTCGTCCCGGCGCCCGTGTTCATCAGCCCTTGCCCGCTGGCTGGTCCGCTTTTGCCTAT
ATCCTCCAGGGCTCCGTCTCTTTTGGCACCCCAGACGCCCTGCGCAAAGTCCAGCAGTTTCACAACGTCTTTTTC
GACTCAAACGGTGACTTTGTTCATGTCGAGTCGGACAAGCATGCCACCAAGCCCAGTCGTCTAGTCCTAGTTGCC
GGAACTCCCCTCGACCAGGATATCGTTCAATATGGACCCTTTGTTCTGACCTCTAAACAAGGTGTCTACCAGGCT
CTTGCTGATTACCAATCTTGCTCCAATGGGTTTGAGCGTGCTCAAAATTGGAAGAGCGAGATCGCCAAGACAATG
GCCAGTTAA
Gene >OphauB2|1009
ATGTCCATTCCACGCAGCATTTCCAAGGTGCTTCTGGCCGTTGAGCAAGCTGAAGGCGCCGGTGCACGCGTCCGC
CGCTCAATAGGCACATCGCGCGTCCCCAACTTTTCGCCTTTTCTCATGCTCGATCACTTTTCCATCAAGCCCGGT
GCCGGCTTTCCTGACCAGTAAGCAACTCTTGCCTCCCCAAGATCCCTTCCGACTCACTTTTTTCTTGCTTCCCAC
AGCCCCCATAGAGGCCAGGAAACAATAACCTACCTCCTCGATGGCGGCGTCGAGCACGAAGACTTTGCCGGAAAT
CGCGGCTCCCTTGGCCCAGGCGACCTCCAGTTCATGACGGCCGGCCGTGGCATCGTCCACGCCGAAATGCCTTGC
CAAAACCCCGACGGCCGTCCCAACGTCGGGCTCCAACTATGGGTGGACTTGCCTCGTCACCTCAAGGATTGCGAG
CCACGATATCGGGATTTGCGCGCCCAAGAAGTCCCTTCCATCAACGTTGATAATGACCGCGCTACCATCAAGATT
ATTTCAGGCCGCAGCCATGGCGTCGACTCGGTCAAGGACCTTGCTTACACTCCCGTCTGGATTCTCGATATTACT
CTTCGTCCCGGCGCCCGTGTTCATCAGCCCTTGCCCGCTGGCTGGTCCGCTTTTGCCTATATCCTCCAGGGCTCC
GTCTCTTTTGGCACCCCAGACGCCCTGCGCAAAGTCCAGCAGTTTCACAACGTCTTTTTCGACTCAAACGGTGAC
TTTGTTCATGTCGAGTCGGACAAGCATGCCACCAAGCCCAGTCGTCTAGGTAATGCTCTTATTGCTACATTTTTC
CTTTGATTTCGATTCTCTAGCTTACTCGGTCCATTTGACTACTAGTCCTAGTTGCCGGAACTCCCCTCGACCAGG
ATATCGTTCAATATGGACCCTTTGTTCTGACCTCTAAACAAGGTGTCTACCAGGCTCTTGCTGATTACCAATCTT
GCTCCAATGGGTTTGAGCGTGCTCAAAATTGGAAGAGCGAGATCGCCAAGACAATGGCCAGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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