Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF05000
Short nameRNA_pol_Rpb1_4
Long nameRNA polymerase Rpb1, domain 4
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
OphauB2|2493 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 3.2E-34 10 471
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.3E-67 473 651
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 1.1E-29 656 833
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 1.2E-17 869 982
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 1.2E-85 989 1618
OphauB2|4439 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.9E-107 14 355
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 1.9E-76 357 522
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 6.4E-46 525 683
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 1.9E-36 710 814
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 5.3E-100 821 1418
PF04992 RNA_pol_Rpb1_6 RNA polymerase Rpb1, domain 6 3.8E-57 887 1071
PF04990 RNA_pol_Rpb1_7 RNA polymerase Rpb1, domain 7 1.5E-46 1155 1290
OphauB2|5424 PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1 1.8E-75 19 349
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 2.8E-15 351 399
PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2 4.0E-41 403 487
PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3 1.5E-26 490 645
PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4 6.0E-15 697 742
PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5 6.9E-71 743 1193

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