Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain37
Total domain count38
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
OphauB2|1094 PF00270 DEAD DEAD/DEAH box helicase 2.6E-49 173 343
PF04851 ResIII Type III restriction enzyme, res subunit 1.3E-05 193 336
PF00271 Helicase_C Helicase conserved C-terminal domain 3.5E-31 385 491
OphauB2|1165 PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-24 17 179
PF00270 DEAD DEAD/DEAH box helicase 4.3E-11 21 182
PF00271 Helicase_C Helicase conserved C-terminal domain 7.8E-13 258 356
OphauB2|1222 PF00270 DEAD DEAD/DEAH box helicase 8.9E-46 106 270
PF04851 ResIII Type III restriction enzyme, res subunit 4.9E-06 126 267
PF00271 Helicase_C Helicase conserved C-terminal domain 6.9E-24 357 452
PF08147 DBP10CT DBP10CT (NUC160) domain 2.0E-19 732 799
OphauB2|123 PF00270 DEAD DEAD/DEAH box helicase 5.1E-16 724 885
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-11 727 884
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-07 1233 1305
OphauB2|184 PF00176 SNF2-rel_dom SNF2-related domain 1.2E-41 980 1275
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-05 980 1148
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-21 1330 1437
OphauB2|1852 PF18149 Helicase_PWI N-terminal helicase PWI domain 4.1E-32 289 402
PF04851 ResIII Type III restriction enzyme, res subunit 2.8E-13 520 695
PF00270 DEAD DEAD/DEAH box helicase 5.0E-29 521 696
PF00271 Helicase_C Helicase conserved C-terminal domain 5.5E-07 758 899
PF02889 Sec63 Sec63 Brl domain 3.9E-89 1021 1326
PF00270 DEAD DEAD/DEAH box helicase 2.7E-17 1372 1534
PF02889 Sec63 Sec63 Brl domain 1.2E-65 1856 2179
OphauB2|2807 PF00176 SNF2-rel_dom SNF2-related domain 4.0E-35 232 410
PF04851 ResIII Type III restriction enzyme, res subunit 8.7E-10 242 405
OphauB2|2894 PF00270 DEAD DEAD/DEAH box helicase 7.1E-18 166 312
PF04851 ResIII Type III restriction enzyme, res subunit 9.9E-05 176 311
PF00271 Helicase_C Helicase conserved C-terminal domain 8.3E-06 487 563
PF13234 rRNA_proc-arch rRNA-processing arch domain 7.1E-90 617 894
PF08148 DSHCT DSHCT (NUC185) domain 1.4E-45 922 1091
OphauB2|3470 PF00270 DEAD DEAD/DEAH box helicase 2.6E-46 69 235
PF04851 ResIII Type III restriction enzyme, res subunit 9.9E-05 89 229
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-31 275 380
OphauB2|3711 PF00176 SNF2-rel_dom SNF2-related domain 2.0E-71 420 732
PF04851 ResIII Type III restriction enzyme, res subunit 8.0E-07 420 600
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-15 767 866
OphauB2|3797 PF08797 HIRAN HIRAN domain 7.1E-25 169 285
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-05 424 686
PF00176 SNF2-rel_dom SNF2-related domain 2.6E-69 429 821
PF00271 Helicase_C Helicase conserved C-terminal domain 3.1E-13 984 1087
OphauB2|3897 PF00270 DEAD DEAD/DEAH box helicase 2.4E-26 285 471
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-08 288 468
PF02889 Sec63 Sec63 Brl domain 5.4E-80 796 1099
PF00270 DEAD DEAD/DEAH box helicase 4.0E-22 1145 1309
PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-09 1156 1294
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-06 1422 1508
PF02889 Sec63 Sec63 Brl domain 1.7E-23 1637 1795
OphauB2|4321 PF04851 ResIII Type III restriction enzyme, res subunit 1.2E-07 813 985
PF00270 DEAD DEAD/DEAH box helicase 4.1E-21 817 989
PF00271 Helicase_C Helicase conserved C-terminal domain 6.9E-13 1040 1135
PF16124 RecQ_Zn_bind RecQ zinc-binding 2.8E-14 1148 1213
PF09382 RQC RQC domain 1.8E-16 1218 1330
OphauB2|4324 PF00270 DEAD DEAD/DEAH box helicase 1.6E-15 174 332
PF04851 ResIII Type III restriction enzyme, res subunit 7.2E-21 174 327
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-20 527 635
OphauB2|4351 PF08839 CDT1 DNA replication factor CDT1 like 2.0E-05 50 138
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-08 289 488
PF00270 DEAD DEAD/DEAH box helicase 1.8E-24 351 525
PF00271 Helicase_C Helicase conserved C-terminal domain 4.1E-10 581 691
PF09369 MZB MrfA Zn-binding domain 6.1E-21 955 1044
OphauB2|4883 PF08658 Rad54_N Rad54 N terminal 9.9E-48 28 191
PF04851 ResIII Type III restriction enzyme, res subunit 4.2E-10 213 391
PF00176 SNF2-rel_dom SNF2-related domain 5.8E-63 216 523
PF00271 Helicase_C Helicase conserved C-terminal domain 4.1E-15 564 673
OphauB2|5066 PF00270 DEAD DEAD/DEAH box helicase 5.5E-38 80 248
PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-07 96 243
PF00271 Helicase_C Helicase conserved C-terminal domain 9.1E-25 286 394
OphauB2|5096 PF04851 ResIII Type III restriction enzyme, res subunit 3.3E-05 357 512
PF00176 SNF2-rel_dom SNF2-related domain 1.1E-62 364 678
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.8E-06 717 768
PF13445 zf-RING_UBOX RING-type zinc-finger 5.9E-06 717 766
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-15 924 1038
OphauB2|5870 PF07529 HSA HSA domain 2.7E-05 425 487
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-08 926 1086
PF00176 SNF2-rel_dom SNF2-related domain 6.8E-71 945 1225
PF00271 Helicase_C Helicase conserved C-terminal domain 3.4E-18 1488 1600
OphauB2|6292 PF00270 DEAD DEAD/DEAH box helicase 1.5E-16 7 163
PF04851 ResIII Type III restriction enzyme, res subunit 6.5E-11 7 161
PF00271 Helicase_C Helicase conserved C-terminal domain 8.8E-15 387 467
PF03368 Dicer_dimer Dicer dimerisation domain 1.5E-20 536 627
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 1.5E-10 918 1044
PF00636 Ribonuclease_3 Ribonuclease III domain 2.6E-18 922 1034
PF00636 Ribonuclease_3 Ribonuclease III domain 9.7E-16 1111 1254
OphauB2|6371 PF00270 DEAD DEAD/DEAH box helicase 7.6E-41 123 297
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-05 144 292
PF00271 Helicase_C Helicase conserved C-terminal domain 5.5E-29 345 449
OphauB2|6423 PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-05 164 336
PF00176 SNF2-rel_dom SNF2-related domain 5.4E-51 181 447
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 1.3E-06 540 675
PF00271 Helicase_C Helicase conserved C-terminal domain 7.7E-18 546 653
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 9.2E-23 780 839
OphauB2|6916 PF13086 AAA_11 AAA domain 2.5E-22 48 313
PF13245 AAA_19 AAA domain 5.0E-06 48 307
PF04851 ResIII Type III restriction enzyme, res subunit 5.7E-05 57 108
PF13087 AAA_12 AAA domain 1.7E-27 322 514
OphauB2|7047 PF00176 SNF2-rel_dom SNF2-related domain 3.8E-69 255 586
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-05 275 438
PF00271 Helicase_C Helicase conserved C-terminal domain 8.2E-15 851 961
OphauB2|7188 PF04851 ResIII Type III restriction enzyme, res subunit 6.8E-14 141 311
PF00270 DEAD DEAD/DEAH box helicase 1.8E-12 154 311
PF00271 Helicase_C Helicase conserved C-terminal domain 7.7E-18 482 598
PF03368 Dicer_dimer Dicer dimerisation domain 4.8E-21 677 763
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 3.1E-09 1096 1214
PF00636 Ribonuclease_3 Ribonuclease III domain 1.2E-20 1105 1211
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 6.3E-16 1278 1431
PF00636 Ribonuclease_3 Ribonuclease III domain 1.6E-20 1298 1417
OphauB2|7194 PF00270 DEAD DEAD/DEAH box helicase 2.6E-45 74 243
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-07 78 236
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-25 280 390
PF13959 DUF4217 Domain of unknown function (DUF4217) 2.4E-23 432 492
OphauB2|7199 PF04851 ResIII Type III restriction enzyme, res subunit 3.5E-08 150 317
PF00176 SNF2-rel_dom SNF2-related domain 4.6E-68 167 440
PF00271 Helicase_C Helicase conserved C-terminal domain 7.6E-18 597 706
OphauB2|7247 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 3.8E-69 93 243
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.5E-31 297 391
PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-06 448 516
PF13086 AAA_11 AAA domain 5.2E-22 448 543
PF13604 AAA_30 AAA domain 3.4E-11 448 646
PF13245 AAA_19 AAA domain 1.0E-10 452 644
PF05127 Helicase_RecD Helicase 4.2E-05 467 556
PF13086 AAA_11 AAA domain 1.7E-30 549 650
PF13087 AAA_12 AAA domain 3.8E-57 657 853
OphauB2|7519 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 1.3E-33 101 225
PF04851 ResIII Type III restriction enzyme, res subunit 9.4E-15 338 495
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 1.4E-124 521 756
PF00271 Helicase_C Helicase conserved C-terminal domain 8.2E-11 565 671
OphauB2|7633 PF13086 AAA_11 AAA domain 1.4E-59 51 266
PF13604 AAA_30 AAA domain 3.2E-11 51 262
PF00580 UvrD-helicase UvrD/REP helicase N-terminal domain 6.2E-06 52 247
PF04851 ResIII Type III restriction enzyme, res subunit 3.1E-05 52 233
PF13245 AAA_19 AAA domain 2.3E-08 56 262
PF09848 DUF2075 Schlafen group 3, DNA/RNA helicase domain 7.4E-05 68 238
PF13087 AAA_12 AAA domain 1.2E-55 300 510
OphauB2|7659 PF00270 DEAD DEAD/DEAH box helicase 5.4E-45 49 213
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-06 52 208
PF00271 Helicase_C Helicase conserved C-terminal domain 9.6E-31 250 358
OphauB2|7692 PF00270 DEAD DEAD/DEAH box helicase 2.0E-30 290 480
PF04851 ResIII Type III restriction enzyme, res subunit 2.1E-05 291 476
PF00271 Helicase_C Helicase conserved C-terminal domain 1.6E-18 520 633
OphauB2|7738 PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-09 181 341
PF00176 SNF2-rel_dom SNF2-related domain 1.2E-81 191 465
PF00271 Helicase_C Helicase conserved C-terminal domain 8.4E-18 488 600
PF09110 HAND HAND 2.7E-34 753 857
PF09111 SLIDE SLIDE 3.8E-43 915 1030
OphauB2|7936 PF04851 ResIII Type III restriction enzyme, res subunit 6.3E-05 131 312
PF00270 DEAD DEAD/DEAH box helicase 2.7E-30 132 350
PF00271 Helicase_C Helicase conserved C-terminal domain 3.3E-19 421 535
OphauB2|7957 PF00176 SNF2-rel_dom SNF2-related domain 2.6E-52 431 763
PF04851 ResIII Type III restriction enzyme, res subunit 4.3E-07 432 596
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 3.9E-06 777 816
PF00271 Helicase_C Helicase conserved C-terminal domain 1.2E-15 855 969
OphauB2|8140 PF00270 DEAD DEAD/DEAH box helicase 1.4E-38 33 203
PF04851 ResIII Type III restriction enzyme, res subunit 8.2E-06 43 166
PF00271 Helicase_C Helicase conserved C-terminal domain 6.5E-30 244 398
OphauB2|970 PF13892 DBINO DNA-binding domain 3.2E-48 718 849
PF04851 ResIII Type III restriction enzyme, res subunit 4.4E-07 962 1130
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-64 980 1265
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-20 1545 1657

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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