Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9974
Gene name
Location	Contig_769:7786..9392
Strand	+
Gene length (bp)	1606
Transcript length (bp)	1071
Coding sequence length (bp)	1071
Protein length (aa)	357

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q12516\|SRF1_YEAST	Regulator of phospholipase D SRF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRF1 PE=1 SV=1	211	346	2.0E-10

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 16	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	211	233	22
2	248	267	19
3	286	308	22
4	323	345	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9974 MTPDTHGRPSEASSQTASTAALLRLRPPRSLPPWIDSYEERYGPAPEDQLRLLNPPARIVQPQRNATPSEPQRRV SKDGFVAWDDPQLGPAKDVRAKIPHFLRYGRASMRGRKWDHLRSAEPIIVASHRPATTNPTLAWQEFLHASAWGP MPNEDSEVVDYDVLRKLQPSFDTKAEVHLNPHDPMASRRRRTVAFYQRLWNGAKRNSLSPLLFRLAVMITSILAL GIAARIYQHVTTRERDSAERTQSIVAIVVDCVAIPYIGYMIWDEYTGKPVGLRSGNSKTRLILLDLFFIIFKSAS TALAFESLVYHSHRDHYLHNLSAALGAFELVGLICWTMTFTVNIFRTNFAKRTGVL*
Coding	>Hirsu2\|9974 ATGACGCCCGATACGCATGGCCGTCCGTCCGAGGCCTCGTCCCAGACGGCCAGCACCGCCGCCCTTTTGCGACTG CGGCCCCCACGCTCTCTTCCTCCGTGGATCGACTCCTACGAGGAGAGATACGGCCCGGCGCCCGAGGACCAGCTC CGCCTGCTCAACCCGCCCGCGCGCATCGTCCAGCCCCAGCGCAACGCCACGCCCAGTGAGCCGCAGCGACGGGTG TCCAAGGATGGCTTCGTCGCCTGGGACGATCCGCAGCTGGGGCCGGCCAAGGACGTCCGCGCCAAGATCCCTCAC TTTCTGCGCTATGGCCGTGCCTCGATGCGAGGCAGGAAATGGGACCACCTGCGATCCGCCGAGCCCATCATCGTC GCCAGCCACCGCCCTGCGACGACGAACCCGACCCTGGCCTGGCAGGAGTTTCTGCACGCGTCGGCATGGGGTCCC ATGCCCAACGAGGACTCCGAGGTCGTCGACTACGACGTCTTGCGGAAGCTGCAGCCGTCCTTCGACACCAAGGCC GAGGTGCATCTGAACCCCCACGACCCCATGGCGTCGCGTAGGCGGCGCACCGTCGCCTTCTACCAGCGCCTCTGG AACGGCGCCAAGCGCAACTCGCTGTCGCCCCTGCTCTTTCGCCTGGCCGTCATGATCACGTCCATCCTCGCGCTC GGCATTGCCGCGCGCATATACCAACACGTGACCACTCGGGAACGCGACAGCGCCGAGCGCACCCAGTCCATCGTC GCCATTGTCGTCGACTGCGTCGCGATCCCCTACATAGGCTACATGATCTGGGACGAGTACACGGGGAAGCCGGTC GGCCTCCGGTCCGGAAATTCCAAGACGCGCCTCATCCTGCTCGACCTCTTCTTCATCATCTTCAAGTCGGCCAGC ACGGCGCTGGCGTTCGAAAGTCTCGTCTACCACAGTCATAGGGACCACTACCTCCACAACCTCTCGGCCGCGCTC GGGGCCTTCGAGTTGGTTGGCCTGATATGCTGGACCATGACCTTCACCGTCAACATTTTCCGGACCAATTTTGCG AAACGCACCGGCGTCTTGTGA
Transcript	>Hirsu2\|9974 ATGACGCCCGATACGCATGGCCGTCCGTCCGAGGCCTCGTCCCAGACGGCCAGCACCGCCGCCCTTTTGCGACTG CGGCCCCCACGCTCTCTTCCTCCGTGGATCGACTCCTACGAGGAGAGATACGGCCCGGCGCCCGAGGACCAGCTC CGCCTGCTCAACCCGCCCGCGCGCATCGTCCAGCCCCAGCGCAACGCCACGCCCAGTGAGCCGCAGCGACGGGTG TCCAAGGATGGCTTCGTCGCCTGGGACGATCCGCAGCTGGGGCCGGCCAAGGACGTCCGCGCCAAGATCCCTCAC TTTCTGCGCTATGGCCGTGCCTCGATGCGAGGCAGGAAATGGGACCACCTGCGATCCGCCGAGCCCATCATCGTC GCCAGCCACCGCCCTGCGACGACGAACCCGACCCTGGCCTGGCAGGAGTTTCTGCACGCGTCGGCATGGGGTCCC ATGCCCAACGAGGACTCCGAGGTCGTCGACTACGACGTCTTGCGGAAGCTGCAGCCGTCCTTCGACACCAAGGCC GAGGTGCATCTGAACCCCCACGACCCCATGGCGTCGCGTAGGCGGCGCACCGTCGCCTTCTACCAGCGCCTCTGG AACGGCGCCAAGCGCAACTCGCTGTCGCCCCTGCTCTTTCGCCTGGCCGTCATGATCACGTCCATCCTCGCGCTC GGCATTGCCGCGCGCATATACCAACACGTGACCACTCGGGAACGCGACAGCGCCGAGCGCACCCAGTCCATCGTC GCCATTGTCGTCGACTGCGTCGCGATCCCCTACATAGGCTACATGATCTGGGACGAGTACACGGGGAAGCCGGTC GGCCTCCGGTCCGGAAATTCCAAGACGCGCCTCATCCTGCTCGACCTCTTCTTCATCATCTTCAAGTCGGCCAGC ACGGCGCTGGCGTTCGAAAGTCTCGTCTACCACAGTCATAGGGACCACTACCTCCACAACCTCTCGGCCGCGCTC GGGGCCTTCGAGTTGGTTGGCCTGATATGCTGGACCATGACCTTCACCGTCAACATTTTCCGGACCAATTTTGCG AAACGCACCGGCGTCTTGTGA
Gene	>Hirsu2\|9974 ATGACGCCCGATACGCATGGCCGTCCGTCCGAGGCCTCGTCCCAGACGGCCAGCACCGCCGCCCTTTTGCGACTG CGGCCCCCACGCTCTCTTCCTCGTGAGCGCCCTCTCCCGACCTCTGCTTTTCCTTCCACCCTCTTTCCCGACGAC TTGCTCACCTCCCGTCTCGTGCAGCGTGGATCGACTCCTACGAGGAGAGATACGGCCCGGCGCCCGAGGACCAGC TCCGCCTGCTCAACCCGCCCGCGCGCATCGTCCAGCCCCAGCGCAACGCCACGCCCAGTGAGCCGCAGCGACGGG TGTCCAAGGATGGCTTCGTCGCCTGGGACGATCCGCAGCTGGGGCCGGCCAAGGACGTCCGCGCCAAGATCCCTC ACTTTCTGCGCTATGGCCGTGCCTCGATGCGAGGCAGGAAATGGGACCACCTGCGATCCGCCGAGCCCATCATCG TCGCCAGCCACCGCCCTGCGACGACGAACCCGACCCTGGCCTGGCAGGAGTTTCTGCACGCGTCGGCATGGGGTC CCATGCCCAACGAGGACTCCGAGGTCGTCGACTACGACGTCTTGCGGAAGCTGCAGCCGTCCTTCGACACCAAGG CCGAGGTGCATCTGAACCCCCACGACCCCATGGCGTCGCGTAGGCGGCGCACCGTCGCCTTCTACCAGCGCCTCT GGAACGGCGCCAAGCGCAACTCGCTGTCGCCCCTGCTCTTTCGCCTGGCCGTCATGATCACGTCCATCCTCGCGC TCGGCATTGCCGCGCGCATATACCAACACGTGACCACTCGGGAACGCGACAGCGCCGAGCGCACCCAGTCCATCG TCGCCATTGTCGTCGACTGCGTCGCGATCCCCTACATAGGCTACATGATCTGGGACGAGTACACGGGGAAGCCGG TCGGCCTCCGGTCCGGAAATTCCAAGACGCGCCTCATCCTGCTCGACCTCTTCTTCATCATCTTCAAGTCGGCCA GCACGGCGCTGGCGTTCGAAAGTCTCGTCTACCACAGTCATAGGGACCACTACCTCCACAACCTCTCGGCCGCGC TCGGGGCCTTCGAGTTGGTTGGCCTGATATGCTGGACCATGACCTTCACCGTCAACATTTTCCGGACCGTCGAGC GGCTCGGCGGCGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGG GGGGGGGGATGGGGGCGTCTTTGACTATCGGGCCGTCGGCCAGGGAGCCGTGCAGGAGTGCCAGGGAGGGAGATG CCGCCCTCGGGGCGGATCCAAGGGGGAAAGACGGAACGCAACTACCGCGTTGTATGTGTCTTAACGATGTTACGA TGGCGTCCCGCTTACATCTCCATGTCTCAAACACACGCGTATGTACTCTAGACAGCACGGCATACCTACCCTACA TCAAACGACAGGTCTCTGGGGGTTCGTTGAGGTGACAAGCAAGGCGCGGGAATCGGTGCATGTTTCAGTCGATGA AATAACCTGTTGTGTGCTTTTTCCGTGCCGCGATGATCCGACCCCTGTGCGAGGACTTCTGCCACGACTTGCGTA GAATTTTGCGAAACGCACCGGCGTCTTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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