Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9951
Gene name
Location	Contig_765:479..1348
Strand	-
Gene length (bp)	869
Transcript length (bp)	792
Coding sequence length (bp)	792
Protein length (aa)	264

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04457	MJ1316	MJ1316 RNA cyclic group end recognition domain	1.8E-18	182	251

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q96B70\|LENG9_HUMAN	Leukocyte receptor cluster member 9 OS=Homo sapiens GN=LENG9 PE=2 SV=2	181	262	1.0E-15
sp\|Q8BTN6\|LENG9_MOUSE	Leukocyte receptor cluster member 9 OS=Mus musculus GN=Leng9 PE=2 SV=1	156	262	6.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 29	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9951 MLLVDMNRKLPTMGIRIWPARFVQQPSAVHDGGGDGDEGSAEFNASYLIGLDWRGSLAAAATSPGETSDFEQPLQ AVLGNFETRIHLDNRYYDASCCWMMASIVDAREVGAMRPDSAEWAGDGAGETDSEGEEEERDEDEGADGSQPAGE EGEGEGAATASSKPAREQRGNQGPRQAGGRFRTAADVINRLRWDRTMDAGDYVVGYRDRFAGVRERALDEWTGEQ THDDFIPQHRIVHFKRRSDGVVVWERETRLDRVFGSGP*
Coding	>Hirsu2\|9951 ATGCTACTGGTTGACATGAATCGCAAGTTGCCGACGATGGGCATACGCATCTGGCCGGCTCGGTTCGTGCAGCAA CCATCTGCAGTGCACGATGGTGGTGGCGACGGCGATGAAGGCAGCGCGGAATTCAATGCGAGTTACTTGATCGGC CTCGATTGGCGAGGAAGCTTGGCCGCGGCCGCGACGTCGCCGGGCGAGACGAGTGACTTTGAGCAACCGCTCCAG GCCGTGCTTGGAAACTTCGAGACGCGCATCCATCTGGACAACCGCTACTACGACGCGAGCTGTTGCTGGATGATG GCGTCGATAGTGGATGCCCGAGAAGTCGGCGCGATGCGGCCGGATTCTGCGGAATGGGCCGGCGACGGGGCTGGG GAGACGGATTCGGAGGGCGAAGAGGAGGAGCGGGACGAGGACGAAGGTGCTGACGGAAGCCAACCAGCCGGCGAG GAGGGCGAGGGCGAGGGCGCGGCCACGGCGTCGTCGAAGCCGGCCCGCGAGCAGCGCGGCAACCAAGGCCCGAGG CAGGCCGGCGGCAGGTTCCGCACGGCGGCCGACGTCATCAACCGGCTGCGCTGGGACCGGACGATGGACGCGGGC GACTACGTGGTCGGGTACCGGGACCGCTTCGCGGGCGTGCGGGAGCGAGCGCTGGACGAGTGGACGGGCGAGCAG ACGCACGACGACTTCATCCCGCAGCACCGCATCGTGCACTTCAAGCGCCGCAGCGACGGCGTCGTGGTGTGGGAG CGCGAGACGAGGCTCGACCGCGTCTTCGGCAGCGGGCCCTGA
Transcript	>Hirsu2\|9951 ATGCTACTGGTTGACATGAATCGCAAGTTGCCGACGATGGGCATACGCATCTGGCCGGCTCGGTTCGTGCAGCAA CCATCTGCAGTGCACGATGGTGGTGGCGACGGCGATGAAGGCAGCGCGGAATTCAATGCGAGTTACTTGATCGGC CTCGATTGGCGAGGAAGCTTGGCCGCGGCCGCGACGTCGCCGGGCGAGACGAGTGACTTTGAGCAACCGCTCCAG GCCGTGCTTGGAAACTTCGAGACGCGCATCCATCTGGACAACCGCTACTACGACGCGAGCTGTTGCTGGATGATG GCGTCGATAGTGGATGCCCGAGAAGTCGGCGCGATGCGGCCGGATTCTGCGGAATGGGCCGGCGACGGGGCTGGG GAGACGGATTCGGAGGGCGAAGAGGAGGAGCGGGACGAGGACGAAGGTGCTGACGGAAGCCAACCAGCCGGCGAG GAGGGCGAGGGCGAGGGCGCGGCCACGGCGTCGTCGAAGCCGGCCCGCGAGCAGCGCGGCAACCAAGGCCCGAGG CAGGCCGGCGGCAGGTTCCGCACGGCGGCCGACGTCATCAACCGGCTGCGCTGGGACCGGACGATGGACGCGGGC GACTACGTGGTCGGGTACCGGGACCGCTTCGCGGGCGTGCGGGAGCGAGCGCTGGACGAGTGGACGGGCGAGCAG ACGCACGACGACTTCATCCCGCAGCACCGCATCGTGCACTTCAAGCGCCGCAGCGACGGCGTCGTGGTGTGGGAG CGCGAGACGAGGCTCGACCGCGTCTTCGGCAGCGGGCCCTGA
Gene	>Hirsu2\|9951 ATGCTACTGGTTGGTAAGTTGACCCAGGGCCGCTCACGGAGATGGCTGTGGCTACGCGCATGATCCCGCAGCAAC ACTGACATATCGTAGACATGAATCGCAAGTTGCCGACGATGGGCATACGCATCTGGCCGGCTCGGTTCGTGCAGC AACCATCTGCAGTGCACGATGGTGGTGGCGACGGCGATGAAGGCAGCGCGGAATTCAATGCGAGTTACTTGATCG GCCTCGATTGGCGAGGAAGCTTGGCCGCGGCCGCGACGTCGCCGGGCGAGACGAGTGACTTTGAGCAACCGCTCC AGGCCGTGCTTGGAAACTTCGAGACGCGCATCCATCTGGACAACCGCTACTACGACGCGAGCTGTTGCTGGATGA TGGCGTCGATAGTGGATGCCCGAGAAGTCGGCGCGATGCGGCCGGATTCTGCGGAATGGGCCGGCGACGGGGCTG GGGAGACGGATTCGGAGGGCGAAGAGGAGGAGCGGGACGAGGACGAAGGTGCTGACGGAAGCCAACCAGCCGGCG AGGAGGGCGAGGGCGAGGGCGCGGCCACGGCGTCGTCGAAGCCGGCCCGCGAGCAGCGCGGCAACCAAGGCCCGA GGCAGGCCGGCGGCAGGTTCCGCACGGCGGCCGACGTCATCAACCGGCTGCGCTGGGACCGGACGATGGACGCGG GCGACTACGTGGTCGGGTACCGGGACCGCTTCGCGGGCGTGCGGGAGCGAGCGCTGGACGAGTGGACGGGCGAGC AGACGCACGACGACTTCATCCCGCAGCACCGCATCGTGCACTTCAAGCGCCGCAGCGACGGCGTCGTGGTGTGGG AGCGCGAGACGAGGCTCGACCGCGTCTTCGGCAGCGGGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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