Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9923
Gene name
LocationContig_76:1165..2382
Strand+
Gene length (bp)1217
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 55 77 22
3 105 127 22
4 134 156 22
5 178 200 22
6 212 234 22
7 249 271 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9923
MMASPDRDEVHPDRISQGYVAFIAVVAVFTLLSSVSVALRFVQRRMLKRWWWDDWSILGALVLAYGILVTTTLVA
TYGGAGYHINTFSQAQLETYIKICLANNVIYNFAVLLSRLSILFFYGRIFSIEPVVIRALQVLGFVIVAGCIAAA
AGFIFSNSPVAGQWNLDIDSTTINLKAFWVSRGILNIVVDVIILAIPQFIVWKLRLSPGRRVAVSFVFLLGSFVI
IASIVRVIYLAKVDVSDFTYEFTIPGIWTCVEMNMSIICACLPVVWSIFNLRAERRERRMPERKLIRSSSPATAT
LSESDKQSYTHASSSRHGGHAGAESWDDMVFLSVPSRIARGHSIC*
Coding >Hirsu2|9923
ATGATGGCCTCGCCGGACCGCGACGAAGTCCATCCGGACCGCATCAGCCAGGGCTATGTCGCCTTCATCGCCGTC
GTCGCCGTCTTCACCCTGCTGTCGAGCGTCAGCGTCGCGCTGCGCTTCGTCCAGCGCCGCATGCTGAAGCGCTGG
TGGTGGGACGACTGGTCCATCCTCGGCGCCCTCGTCCTGGCCTACGGCATCTTGGTCACGACGACGCTCGTCGCC
ACCTACGGCGGCGCCGGCTATCACATCAACACCTTCTCCCAGGCCCAGCTCGAGACCTACATCAAGATTTGCCTG
GCCAACAACGTCATCTACAACTTCGCCGTCCTGCTGTCCCGCCTCTCCATCCTCTTCTTCTACGGCCGCATCTTC
TCCATCGAGCCCGTCGTCATCCGCGCCCTGCAGGTCCTCGGCTTCGTCATCGTCGCCGGCTGCATCGCCGCCGCC
GCCGGCTTCATTTTCTCCAACTCGCCCGTCGCGGGCCAGTGGAACCTCGACATCGACTCCACCACCATCAACCTC
AAGGCCTTCTGGGTCTCGCGCGGCATCCTTAACATTGTCGTCGACGTCATCATCCTCGCCATCCCGCAGTTCATC
GTTTGGAAGCTTCGGCTGTCCCCCGGCCGCCGCGTTGCCGTCTCCTTTGTCTTTTTGCTTGGTAGCTTTGTCATA
ATCGCCAGCATCGTTCGAGTCATTTACCTTGCCAAAGTCGACGTTTCCGACTTTACTTACGAGTTCACGATACCC
GGCATATGGACGTGCGTCGAGATGAATATGTCCATCATCTGTGCCTGCCTTCCCGTCGTTTGGAGCATCTTTAAC
TTGAGGGCCGAGCGCCGCGAGCGTCGCATGCCCGAGCGCAAATTGATCCGATCCTCGTCGCCCGCCACTGCCACC
CTGTCCGAAAGCGACAAGCAAAGCTATACACATGCCTCCAGCTCCCGCCACGGAGGCCACGCCGGCGCTGAGAGT
TGGGATGACATGGTCTTCCTGAGCGTGCCGAGTCGCATTGCGAGGGGCCACAGCATATGCTAG
Transcript >Hirsu2|9923
ATGATGGCCTCGCCGGACCGCGACGAAGTCCATCCGGACCGCATCAGCCAGGGCTATGTCGCCTTCATCGCCGTC
GTCGCCGTCTTCACCCTGCTGTCGAGCGTCAGCGTCGCGCTGCGCTTCGTCCAGCGCCGCATGCTGAAGCGCTGG
TGGTGGGACGACTGGTCCATCCTCGGCGCCCTCGTCCTGGCCTACGGCATCTTGGTCACGACGACGCTCGTCGCC
ACCTACGGCGGCGCCGGCTATCACATCAACACCTTCTCCCAGGCCCAGCTCGAGACCTACATCAAGATTTGCCTG
GCCAACAACGTCATCTACAACTTCGCCGTCCTGCTGTCCCGCCTCTCCATCCTCTTCTTCTACGGCCGCATCTTC
TCCATCGAGCCCGTCGTCATCCGCGCCCTGCAGGTCCTCGGCTTCGTCATCGTCGCCGGCTGCATCGCCGCCGCC
GCCGGCTTCATTTTCTCCAACTCGCCCGTCGCGGGCCAGTGGAACCTCGACATCGACTCCACCACCATCAACCTC
AAGGCCTTCTGGGTCTCGCGCGGCATCCTTAACATTGTCGTCGACGTCATCATCCTCGCCATCCCGCAGTTCATC
GTTTGGAAGCTTCGGCTGTCCCCCGGCCGCCGCGTTGCCGTCTCCTTTGTCTTTTTGCTTGGTAGCTTTGTCATA
ATCGCCAGCATCGTTCGAGTCATTTACCTTGCCAAAGTCGACGTTTCCGACTTTACTTACGAGTTCACGATACCC
GGCATATGGACGTGCGTCGAGATGAATATGTCCATCATCTGTGCCTGCCTTCCCGTCGTTTGGAGCATCTTTAAC
TTGAGGGCCGAGCGCCGCGAGCGTCGCATGCCCGAGCGCAAATTGATCCGATCCTCGTCGCCCGCCACTGCCACC
CTGTCCGAAAGCGACAAGCAAAGCTATACACATGCCTCCAGCTCCCGCCACGGAGGCCACGCCGGCGCTGAGAGT
TGGGATGACATGGTCTTCCTGAGCGTGCCGAGTCGCATTGCGAGGGGCCACAGCATATGCTAG
Gene >Hirsu2|9923
ATGATGGCCTCGCCGGACCGCGACGAAGTCCATCCGGACCGCATCAGCCAGGGCTATGTCGCCTTCATCGCCGTC
GTCGCCGTCTTCACCCTGCTGTCGAGCGTCAGCGTCGCGCTGCGCTTCGTCCAGCGCCGCATGCTGAAGCGCTGG
TGGTGGGACGACTGGTCCATCCTCGGCGCCCTCGTCCTGGCCTACGGCATCTTGGTCACGACGACGCTCGTCGCC
ACCTACGGCGGCGCCGGCTATCACATCAACACCTTCTCCCAGGCCCAGCTCGAGACCTACATCAAGGTACGCACG
GGGCCGGCGCTGTCGTGCCCGGCCGCCGCTGACCCGACCGCAGATTTGCCTGGCCAACAACGTCATCTACAACTT
CGCCGTCCTGCTGTCCCGCCTCTCCATCCTCTTCTTCTACGGCCGCATCTTCTCCATCGAGCCCGTCGTCATCCG
CGCCCTGCAGGTCCTCGGCTTCGTCATCGTCGCCGGCTGCATCGCCGCCGCCGCCGGCTTCATTTTCTCCAACTC
GCCCGTCGCGGGCCAGTGGAACCTCGACATCGACTCCACCACCATCAACCTCAAGGCCTTCTGGGTCTCGCGCGG
CATCCTTAACATTGTCGTCGACGTCATCATCCTCGCCATCCCGCAGTTCATCGTTTGGAAGCTTCGGCTGTCCCC
CGGCCGCCGCGTTGCCGTCTCCTTTGTCTTTTTGCTTGGTAGCTTGTGAGTTGGTTCGTGCTGCGCCGAGGCCCG
TCGTCTAATCGACTCCGCAGTGTCATAATCGCCAGCATCGTTCGAGTCATTTACCTTGCCAAAGTCGACGTTTCC
GACTTTACTTGTGAGTTCCTGGCCTCCGACGCTGCCACCTGCCACGCCCCGGGCGGCGGGCCCAACGACTCCGCT
GACCGTCCTCAGACGAGTTCACGATACCCGGCATATGGACGTGCGTCGAGATGAATATGTCCATCATCTGTGCCT
GCCTTCCCGTCGTTTGGAGCATCTTTAACTTGAGGGCCGAGCGCCGCGAGCGTCGCATGCCCGAGCGCAAATTGA
TCCGATCCTCGTCGCCCGCCACTGCCACCCTGTCCGAAAGCGACAAGCAAAGCTATACACATGCCTCCAGCTCCC
GCCACGGAGGCCACGCCGGCGCTGAGAGTTGGGATGACATGGTCTTCCTGAGCGTGCCGAGTCGCATTGCGAGGG
GCCACAGCATATGCTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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