Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|991
Gene name
Location	Contig_1204:3046..3995
Strand	+
Gene length (bp)	949
Transcript length (bp)	753
Coding sequence length (bp)	753
Protein length (aa)	251

PFAM Domains

(None)

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9USN4\|YJA1_SCHPO	Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2	89	223	6.0E-18

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	160	179	19
2	186	208	22
3	218	237	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|991 MVKDEHSWVQFGSTEATSNTQVGSINSEKEEHEKPASLADWEAGSDDAPAHGDSRRCVGSVRSGKTLSRSVSEVG NGIQNQRDPCFVREEGLARADSPGSRDATQVQWDGPGDPANPKCWPIKGKWSAVFCASLRPVYLCPRIRPGALGL GPPLGATRGVIIIQISNVVFLLFNLGCGLARTEGQMIAFRFLAGIGGSAPLAIGGGLPSDLFSDEGRGRVMSLYM MFLYGMIYVHSLGDQVPRVAGHSGL*
Coding	>Hirsu2\|991 ATGGTCAAGGACGAGCACAGCTGGGTGCAATTCGGGTCCACCGAGGCTACGTCCAACACCCAAGTCGGCTCGATA AACTCGGAGAAGGAGGAGCACGAGAAGCCGGCGAGCTTGGCCGACTGGGAGGCAGGCAGCGATGATGCGCCGGCT CATGGGGACTCTAGGCGTTGTGTCGGATCGGTTCGCTCCGGCAAGACCCTGTCGAGGAGCGTCTCGGAAGTCGGG AACGGAATCCAGAACCAGAGGGACCCTTGCTTCGTGCGGGAAGAGGGCCTCGCCCGGGCGGATAGTCCGGGTAGC CGAGACGCCACCCAAGTGCAATGGGACGGGCCTGGCGACCCTGCGAATCCGAAGTGCTGGCCCATCAAGGGAAAA TGGTCGGCCGTCTTCTGCGCGAGCCTTCGTCCTGTCTATCTTTGTCCTCGCATTCGCCCTGGGGCCCTTGGTCTG GGGCCCCCTCTCGGAGCTACACGGGGCGTCATCATTATTCAGATATCCAACGTCGTCTTCCTCCTTTTCAACCTC GGCTGCGGCCTGGCCCGTACCGAGGGCCAGATGATCGCCTTTAGGTTCTTGGCCGGCATCGGCGGTTCTGCACCT CTAGCTATCGGAGGCGGCCTCCCTAGCGATCTCTTCTCCGACGAGGGGCGTGGCCGGGTCATGTCGCTCTACATG ATGTTCCTATACGGCATGATCTACGTCCACTCTCTGGGCGACCAAGTACCACGAGTCGCCGGGCATTCAGGGCTT TAA
Transcript	>Hirsu2\|991 ATGGTCAAGGACGAGCACAGCTGGGTGCAATTCGGGTCCACCGAGGCTACGTCCAACACCCAAGTCGGCTCGATA AACTCGGAGAAGGAGGAGCACGAGAAGCCGGCGAGCTTGGCCGACTGGGAGGCAGGCAGCGATGATGCGCCGGCT CATGGGGACTCTAGGCGTTGTGTCGGATCGGTTCGCTCCGGCAAGACCCTGTCGAGGAGCGTCTCGGAAGTCGGG AACGGAATCCAGAACCAGAGGGACCCTTGCTTCGTGCGGGAAGAGGGCCTCGCCCGGGCGGATAGTCCGGGTAGC CGAGACGCCACCCAAGTGCAATGGGACGGGCCTGGCGACCCTGCGAATCCGAAGTGCTGGCCCATCAAGGGAAAA TGGTCGGCCGTCTTCTGCGCGAGCCTTCGTCCTGTCTATCTTTGTCCTCGCATTCGCCCTGGGGCCCTTGGTCTG GGGCCCCCTCTCGGAGCTACACGGGGCGTCATCATTATTCAGATATCCAACGTCGTCTTCCTCCTTTTCAACCTC GGCTGCGGCCTGGCCCGTACCGAGGGCCAGATGATCGCCTTTAGGTTCTTGGCCGGCATCGGCGGTTCTGCACCT CTAGCTATCGGAGGCGGCCTCCCTAGCGATCTCTTCTCCGACGAGGGGCGTGGCCGGGTCATGTCGCTCTACATG ATGTTCCTATACGGCATGATCTACGTCCACTCTCTGGGCGACCAAGTACCACGAGTCGCCGGGCATTCAGGGCTT TAA
Gene	>Hirsu2\|991 ATGGTCAAGGACGAGCACAGCTGGGTGCAATTCGGGTCCACCGAGGCTACGTCCAACACCCAAGTCGGCTCGATA AACTCGGAGAAGGAGGAGCACGAGAAGCCGGCGAGCTTGGCCGACTGGGAGGCAGGCAGCGATGATGCGCCGGCT CATGGGGACTCTAGGCGTTGTGTCGGATCGGTTCGCTCCGGCAAGACCCTGTCGAGGAGCGTCTCGGAAGTCGGG AACGGAATCCAGAACCAGAGGGACCCTTGCTTCGTGCGGGAAGAGGGCCTCGCCCGGGCGGATAGTCCGGGTAGC CGAGACGCCACCCAAGTGCAATGGGACGGGCCTGGCGACCCTGCGAATCCGAAGTGCTGGCCCATCAAGGGAAAA TGGTCGGCCGTCTTCTGCGGTAGGTGCTTGGCGTCTCACTATGCGCCGGCCTCGCTCGGGGAGAAAAGGGTGACT TGAAGCTGACCTACCTGCATGGGGGCTCTGGCCGGCTACCTCAAGTGTCCTTCACTCTCATATCCCCCATGGCAT CATCCATGGTGGCCCCTGCCCTCGAGAAAATCGGATAGGACCTGGAAATTGACAGTGATCTGGAGCGAGCCTTCG TCCTGTCTATCTTTGTCCTCGCATTCGCCCTGGGGCCCTTGGTCTGGGGCCCCCTCTCGGAGCTACACGGGGCGT CATCATTATTCAGATATCCAACGTCGTCTTCCTCCTTTTCAACCTCGGCTGCGGCCTGGCCCGTACCGAGGGCCA GATGATCGCCTTTAGGTTCTTGGCCGGCATCGGCGGTTCTGCACCTCTAGCTATCGGAGGCGGCCTCCCTAGCGA TCTCTTCTCCGACGAGGGGCGTGGCCGGGTCATGTCGCTCTACATGATGTTCCTATACGGCATGATCTACGTCCA CTCTCTGGGCGACCAAGTACCACGAGTCGCCGGGCATTCAGGGCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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