© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|99 |
| Gene name | |
| Location | Contig_1013:3539..5629 |
| Strand | + |
| Gene length (bp) | 2090 |
| Transcript length (bp) | 1959 |
| Coding sequence length (bp) | 1959 |
| Protein length (aa) | 653 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06687 | SUR7 | SUR7/PalI family | 2.3E-25 | 8 | 163 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q51MB1|PALI_MAGO7 | pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 | 21 | 312 | 2.0E-88 |
| sp|Q7Z8R5|PALI_YARLI | pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 | 3 | 263 | 2.0E-52 |
| sp|O74472|MUG33_SCHPO | Meiotically up-regulated gene 33 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug33 PE=1 SV=1 | 3 | 209 | 2.0E-26 |
| sp|Q7SFN5|PALI_NEUCR | pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 | 409 | 627 | 3.0E-26 |
| sp|Q6CUG3|PALI2_KLULA | pH-response regulator palI/RIM9 homolog 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0C05060g PE=3 SV=1 | 21 | 175 | 2.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q51MB1|PALI_MAGO7 | pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 | 21 | 312 | 2.0E-88 |
| sp|Q7Z8R5|PALI_YARLI | pH-response regulator protein palI/RIM9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM9 PE=3 SV=3 | 3 | 263 | 2.0E-52 |
| sp|O74472|MUG33_SCHPO | Meiotically up-regulated gene 33 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug33 PE=1 SV=1 | 3 | 209 | 2.0E-26 |
| sp|Q7SFN5|PALI_NEUCR | pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 | 409 | 627 | 3.0E-26 |
| sp|Q6CUG3|PALI2_KLULA | pH-response regulator palI/RIM9 homolog 2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0C05060g PE=3 SV=1 | 21 | 175 | 2.0E-21 |
| sp|Q04734|PALI_YEAST | pH-response regulator protein palI/RIM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM9 PE=1 SV=1 | 20 | 198 | 1.0E-20 |
| sp|Q759Y2|PALI_ASHGO | pH-response regulator protein palI/RIM9 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RIM9 PE=3 SV=1 | 24 | 184 | 1.0E-20 |
| sp|Q6CXZ7|PALI1_KLULA | pH-response regulator palI/RIM9 homolog 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0A04389g PE=3 SV=1 | 20 | 186 | 1.0E-19 |
| sp|Q08157|YOL19_YEAST | Uncharacterized membrane protein YOL019W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL019W PE=1 SV=1 | 13 | 176 | 4.0E-15 |
| sp|Q10268|MAC1_SCHPO | Membrane-anchored protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mac1 PE=1 SV=1 | 17 | 227 | 2.0E-14 |
| sp|Q59WV0|PALI_CANAL | pH-response regulator protein palI/RIM9 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM9 PE=3 SV=2 | 1 | 186 | 5.0E-13 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005886 | plasma membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0016020 | membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | Transmembrane domain | 0.1636 | 0.0786 | 0.0303 | 0.7205 | 0.0649 | 0.0031 | 0.1905 | 0.3729 | 0.1653 | 0.0005 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 31 | 0.999777 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 84 | 106 | 22 |
| 3 | 119 | 140 | 21 |
| 4 | 150 | 172 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4702 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|99 MARPATPLTVLLLVAFALLLLSVLSVPVTKAIPLGSFKDVTFGVFGYCKDGGECSSIGIGYDTGKLLDNDQQAFD LPVGVRDTVSVILVVHPVAALLALVMFIMGIVAHLHAPAHSSKYLLVLFIFVLISFLVSLLAFIVDVLLFIPHMA WGSYMVLAATIVLGLSAVASCAMRRAVVSRKAHKKRVGDNAEMSGENYYNRGGSLNYYGADDLSKPSLAVTAEPT LPMVSGGNAGAGDKLPQFASFEHRNKDDRFSDEMIPLTQRSPSNRSPHAAGDFAAINSAVPPPPSSRDRNPYATT NSPVDPYGSRRGRGDMGPVGGYGGRGGGGRGYGRGGFDNYGPPTPTRGGYGQGGRGGPPGLRAAYGPPSRGGYGA GGARGPPPTLNNGPSPYDRRPTVDDGYYGQQKVEYRPYTPATELPRAESPPPLAGNGPARAADNATSRPDETGPY GRIRGDDTDVAGMVGLQRTRPQARHDTMMTEGSRYSTDEAYVPPRAAWNEDAGRNSPGAGPPSPQQRPDPETSGR LAPPGGDYYDDVYAAYASPSRPEHQPPPAASYRPEETSAPVGRARSPSESDRSNFTSISQRGVNPRWNANHPGYQ GPRRVAQQQQQRRRDLLLDNPDFQLPGSRVQGGAHRKGPGMTPGSAYPTTAI* |
| Coding | >Hirsu2|99 ATGGCTCGGCCGGCCACGCCCTTGACCGTCTTGCTGCTCGTCGCCTTCGCCCTGCTGCTGCTGTCCGTCCTGTCC GTCCCCGTCACCAAGGCCATCCCCCTCGGCTCCTTCAAGGACGTCACCTTTGGCGTCTTTGGCTACTGCAAGGAT GGCGGCGAATGCAGCTCCATCGGCATAGGATATGACACCGGCAAACTGCTCGACAACGACCAGCAGGCCTTTGAC CTGCCCGTCGGCGTCCGCGATACCGTTTCCGTCATTCTCGTTGTTCACCCCGTCGCCGCCCTCCTCGCCCTCGTC ATGTTCATCATGGGCATTGTCGCCCACCTGCATGCGCCCGCCCACTCGTCCAAATACCTCCTCGTCCTCTTCATC TTCGTCCTCATCAGCTTTCTCGTCTCCCTCCTCGCCTTCATCGTCGACGTCCTCCTCTTCATCCCCCACATGGCT TGGGGCTCCTACATGGTCCTGGCCGCTACCATCGTCCTCGGCCTGAGCGCCGTCGCCTCGTGCGCCATGCGCCGC GCCGTCGTCAGCAGAAAGGCCCACAAGAAGCGCGTCGGCGACAATGCCGAGATGAGCGGCGAAAACTACTACAAC CGAGGCGGCTCGCTCAACTACTACGGCGCCGACGACCTGTCCAAGCCCTCCCTCGCCGTTACCGCCGAGCCCACC CTGCCCATGGTCAGCGGCGGCAATGCGGGCGCCGGCGACAAGCTGCCCCAGTTCGCCTCCTTTGAGCATCGCAAC AAGGATGACCGCTTCAGCGACGAGATGATCCCGCTGACCCAGCGCTCCCCCTCCAACAGGTCGCCGCACGCCGCC GGTGACTTCGCCGCCATCAACAGCGCGGTACCGCCGCCACCGTCGTCCCGAGACCGCAACCCGTATGCGACAACC AACTCCCCCGTCGACCCCTACGGCAGCCGCAGGGGCAGAGGAGACATGGGTCCCGTCGGCGGCTACGGAGGCCGG GGCGGAGGCGGCCGAGGATATGGACGCGGGGGCTTCGACAACTACGGGCCTCCGACGCCGACCAGAGGAGGCTAC GGTCAAGGCGGCCGGGGCGGCCCTCCCGGCCTGAGAGCAGCATACGGCCCTCCGTCGCGCGGCGGCTACGGAGCT GGAGGGGCCCGAGGCCCGCCCCCGACCTTGAACAACGGCCCGAGCCCGTACGACCGGAGGCCGACAGTCGATGAC GGGTACTACGGGCAGCAAAAGGTCGAGTACCGGCCCTACACGCCCGCGACCGAGCTCCCGAGAGCAGAGTCGCCG CCACCGCTCGCAGGCAACGGCCCCGCGAGGGCGGCGGACAACGCGACGAGCCGACCCGACGAGACGGGCCCGTAC GGCCGGATCCGCGGTGACGACACCGACGTGGCCGGCATGGTGGGTCTGCAACGGACGCGCCCTCAGGCCCGCCAC GACACGATGATGACGGAGGGAAGCCGATACAGCACTGACGAGGCCTACGTACCGCCCCGCGCGGCGTGGAACGAG GACGCGGGGAGGAACTCGCCCGGGGCCGGGCCGCCGAGTCCGCAGCAGCGCCCAGACCCCGAGACGTCCGGACGG CTGGCGCCGCCGGGCGGCGACTACTACGACGATGTGTACGCGGCGTACGCCAGCCCGTCGCGGCCCGAGCACCAG CCTCCGCCCGCGGCCAGCTACCGTCCCGAGGAGACGAGCGCGCCGGTGGGCAGGGCCCGCAGCCCGTCCGAATCG GACCGCTCCAACTTCACGTCCATCTCGCAGAGGGGCGTCAATCCCCGATGGAACGCCAACCACCCGGGGTACCAG GGCCCGCGGCGCGTGGCCCAGCAGCAACAGCAACGGCGGCGGGACCTGCTGCTGGACAACCCGGACTTCCAACTG CCCGGAAGCCGCGTCCAGGGAGGAGCACATAGGAAAGGGCCCGGCATGACTCCGGGCAGCGCCTATCCCACCACC GCGATATAG |
| Transcript | >Hirsu2|99 ATGGCTCGGCCGGCCACGCCCTTGACCGTCTTGCTGCTCGTCGCCTTCGCCCTGCTGCTGCTGTCCGTCCTGTCC GTCCCCGTCACCAAGGCCATCCCCCTCGGCTCCTTCAAGGACGTCACCTTTGGCGTCTTTGGCTACTGCAAGGAT GGCGGCGAATGCAGCTCCATCGGCATAGGATATGACACCGGCAAACTGCTCGACAACGACCAGCAGGCCTTTGAC CTGCCCGTCGGCGTCCGCGATACCGTTTCCGTCATTCTCGTTGTTCACCCCGTCGCCGCCCTCCTCGCCCTCGTC ATGTTCATCATGGGCATTGTCGCCCACCTGCATGCGCCCGCCCACTCGTCCAAATACCTCCTCGTCCTCTTCATC TTCGTCCTCATCAGCTTTCTCGTCTCCCTCCTCGCCTTCATCGTCGACGTCCTCCTCTTCATCCCCCACATGGCT TGGGGCTCCTACATGGTCCTGGCCGCTACCATCGTCCTCGGCCTGAGCGCCGTCGCCTCGTGCGCCATGCGCCGC GCCGTCGTCAGCAGAAAGGCCCACAAGAAGCGCGTCGGCGACAATGCCGAGATGAGCGGCGAAAACTACTACAAC CGAGGCGGCTCGCTCAACTACTACGGCGCCGACGACCTGTCCAAGCCCTCCCTCGCCGTTACCGCCGAGCCCACC CTGCCCATGGTCAGCGGCGGCAATGCGGGCGCCGGCGACAAGCTGCCCCAGTTCGCCTCCTTTGAGCATCGCAAC AAGGATGACCGCTTCAGCGACGAGATGATCCCGCTGACCCAGCGCTCCCCCTCCAACAGGTCGCCGCACGCCGCC GGTGACTTCGCCGCCATCAACAGCGCGGTACCGCCGCCACCGTCGTCCCGAGACCGCAACCCGTATGCGACAACC AACTCCCCCGTCGACCCCTACGGCAGCCGCAGGGGCAGAGGAGACATGGGTCCCGTCGGCGGCTACGGAGGCCGG GGCGGAGGCGGCCGAGGATATGGACGCGGGGGCTTCGACAACTACGGGCCTCCGACGCCGACCAGAGGAGGCTAC GGTCAAGGCGGCCGGGGCGGCCCTCCCGGCCTGAGAGCAGCATACGGCCCTCCGTCGCGCGGCGGCTACGGAGCT GGAGGGGCCCGAGGCCCGCCCCCGACCTTGAACAACGGCCCGAGCCCGTACGACCGGAGGCCGACAGTCGATGAC GGGTACTACGGGCAGCAAAAGGTCGAGTACCGGCCCTACACGCCCGCGACCGAGCTCCCGAGAGCAGAGTCGCCG CCACCGCTCGCAGGCAACGGCCCCGCGAGGGCGGCGGACAACGCGACGAGCCGACCCGACGAGACGGGCCCGTAC GGCCGGATCCGCGGTGACGACACCGACGTGGCCGGCATGGTGGGTCTGCAACGGACGCGCCCTCAGGCCCGCCAC GACACGATGATGACGGAGGGAAGCCGATACAGCACTGACGAGGCCTACGTACCGCCCCGCGCGGCGTGGAACGAG GACGCGGGGAGGAACTCGCCCGGGGCCGGGCCGCCGAGTCCGCAGCAGCGCCCAGACCCCGAGACGTCCGGACGG CTGGCGCCGCCGGGCGGCGACTACTACGACGATGTGTACGCGGCGTACGCCAGCCCGTCGCGGCCCGAGCACCAG CCTCCGCCCGCGGCCAGCTACCGTCCCGAGGAGACGAGCGCGCCGGTGGGCAGGGCCCGCAGCCCGTCCGAATCG GACCGCTCCAACTTCACGTCCATCTCGCAGAGGGGCGTCAATCCCCGATGGAACGCCAACCACCCGGGGTACCAG GGCCCGCGGCGCGTGGCCCAGCAGCAACAGCAACGGCGGCGGGACCTGCTGCTGGACAACCCGGACTTCCAACTG CCCGGAAGCCGCGTCCAGGGAGGAGCACATAGGAAAGGGCCCGGCATGACTCCGGGCAGCGCCTATCCCACCACC GCGATATAG |
| Gene | >Hirsu2|99 ATGGCTCGGCCGGCCACGCCCTTGACCGTCTTGCTGCTCGTCGCCTTCGCCCTGCTGCTGCTGTCCGTCCTGTCC GTCCCCGTCACCAAGGCCATCCCCCTCGGCTCCTTCAAGGACGTCACCTTTGGCGTCTTTGGCTACTGCAAGGAT GGCGGCGAATGCAGCTCCATCGGCATAGGATATGACACCGGTATGCCGCCCGCCCCGTCGCCTCGCTCCTCTCCG CTGACCTCGCACCAGGCAAACTGCTCGACAACGACCAGCAGGCCTTTGACCTGCCCGTCGGCGTCCGCGATACCG TTTCCGTCATTCTCGTTGTTCACCCCGTCGCCGCCCTCCTCGCCCTCGTCATGTTCATCATGGGCATTGTCGCCC ACCTGCATGCGCCCGCCCACTCGTCCAAATACCTCCTCGTCCTCTTCATCTTCGTCCTCATCAGCTTTCTCGTCT CCCTCCTCGCCTTCATCGTCGACGTCCTCCTCTTCATCCCCCACATGGCTTGGGGCTCCTACATGGTCCTGGCCG CTACCATCGTCCTCGGCCTGAGCGCCGTCGCCTCGTGCGCCATGCGCCGCGCCGTCGTCAGCAGAAAGGCCCACA AGAAGCGCGTCGGCGACAATGCCGAGATGAGCGGCGAAAACTACTACAACCGAGGCGGCTCGCTCAACTACTACG GCGCCGACGACCTGTCCAAGCCCTCCCTCGCCGTTACCGCCGAGCCCACCCTGCCCATGGTCAGCGGCGGCAATG CGGGCGCCGGCGACAAGCTGCCCCAGTTCGCCTCCTTTGAGCATCGCAACAAGGATGACCGCTTCAGCGACGAGA TGATCCCGCTGACCCAGCGCTCCCCCTCCAACAGGTCGCCGCACGCCGCCGGTGACTTCGCCGCCATCAACAGCG CGGTACCGCCGCCACCGTCGTCCCGAGACCGCAACCCGTATGCGACAACCAACTCCCCCGTCGACCCCTACGGCA GCCGCAGGGGCAGAGGAGACATGGGTCCCGTCGGCGGCTACGGAGGCCGGGGCGGAGGCGGCCGAGGATATGGAC GCGGGGGCTTCGACAACTACGGGCCTCCGACGCCGACCAGAGGAGGCTACGGTCAAGGCGGCCGGGGCGGCCCTC CCGGCCTGAGAGCAGCATACGGCCCTCCGTCGCGCGGCGGCTACGGAGCTGGAGGGGCCCGAGGCCCGCCCCCGA CCTTGAACAACGGCCCGAGCCCGTACGACCGGAGGCCGACAGTCGATGACGGGTACTACGGGCAGCAAAAGGTCG AGTACCGGCCCTACACGCCCGCGACCGAGCTCCCGAGAGCAGAGTCGCCGCCACCGCTCGCAGGCAACGGCCCCG CGAGGGCGGCGGACAACGCGACGAGCCGACCCGACGAGACGGGCCCGTACGGCCGGATCCGCGGTGACGACACCG ACGTGGCCGGCATGGTGGGTCTGCAACGGACGCGCCCTCAGGCCCGCCACGACACGATGATGACGGAGGGAAGCC GATACAGCACTGACGAGTAAGTGACCCGGCCTTCCCCACATCGATGGCTCCTCTGGTCTCCTCGGTGCGAGCGGG TGACTGACTGGTTGCTCGCCAGGGCCTACGTACCGCCCCGCGCGGCGTGGAACGAGGACGCGGGGAGGAACTCGC CCGGGGCCGGGCCGCCGAGTCCGCAGCAGCGCCCAGACCCCGAGACGTCCGGACGGCTGGCGCCGCCGGGCGGCG ACTACTACGACGATGTGTACGCGGCGTACGCCAGCCCGTCGCGGCCCGAGCACCAGCCTCCGCCCGCGGCCAGCT ACCGTCCCGAGGAGACGAGCGCGCCGGTGGGCAGGGCCCGCAGCCCGTCCGAATCGGACCGCTCCAACTTCACGT CCATCTCGCAGAGGGGCGTCAATCCCCGATGGAACGCCAACCACCCGGGGTACCAGGGCCCGCGGCGCGTGGCCC AGCAGCAACAGCAACGGCGGCGGGACCTGCTGCTGGACAACCCGGACTTCCAACTGCCCGGAAGCCGCGTCCAGG GAGGAGCACATAGGAAAGGGCCCGGCATGACTCCGGGCAGCGCCTATCCCACCACCGCGATATAG |