Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9877
Gene name
LocationContig_752:78..417
Strand+
Gene length (bp)339
Transcript length (bp)339
Coding sequence length (bp)339
Protein length (aa) 113

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13373 DUF2407_C DUF2407 C-terminal domain 8.9E-22 1 105

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 59 78 19
2 88 110 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9877
LRTQFASIHTERFAPDALPSPDALRGMEDAWIDSNAGELPSAASPLEDDLSSMSNVLDILIRGMMIGFFFPLGSL
TWLLRQGIWSDKWQIFVGSGVVLSLTVGVVMGISGDH*
Coding >Hirsu2|9877
CTGCGCACCCAGTTCGCCTCCATCCACACCGAGCGCTTCGCCCCCGACGCCCTGCCCTCGCCCGACGCCCTGCGC
GGCATGGAGGACGCCTGGATCGACTCCAACGCCGGCGAGCTGCCCTCGGCCGCCAGCCCGCTTGAGGACGACCTC
AGCAGCATGTCCAACGTCCTCGACATCCTCATCCGCGGCATGATGATCGGCTTCTTCTTCCCCCTCGGCAGCCTG
ACCTGGCTCCTTCGCCAGGGCATCTGGAGCGACAAATGGCAGATCTTCGTCGGCTCCGGCGTCGTCCTCAGTCTC
ACCGTCGGCGTCGTCATGGGCATCTCGGGAGATCATTGA
Transcript >Hirsu2|9877
CTGCGCACCCAGTTCGCCTCCATCCACACCGAGCGCTTCGCCCCCGACGCCCTGCCCTCGCCCGACGCCCTGCGC
GGCATGGAGGACGCCTGGATCGACTCCAACGCCGGCGAGCTGCCCTCGGCCGCCAGCCCGCTTGAGGACGACCTC
AGCAGCATGTCCAACGTCCTCGACATCCTCATCCGCGGCATGATGATCGGCTTCTTCTTCCCCCTCGGCAGCCTG
ACCTGGCTCCTTCGCCAGGGCATCTGGAGCGACAAATGGCAGATCTTCGTCGGCTCCGGCGTCGTCCTCAGTCTC
ACCGTCGGCGTCGTCATGGGCATCTCGGGAGATCATTGA
Gene >Hirsu2|9877
CTGCGCACCCAGTTCGCCTCCATCCACACCGAGCGCTTCGCCCCCGACGCCCTGCCCTCGCCCGACGCCCTGCGC
GGCATGGAGGACGCCTGGATCGACTCCAACGCCGGCGAGCTGCCCTCGGCCGCCAGCCCGCTTGAGGACGACCTC
AGCAGCATGTCCAACGTCCTCGACATCCTCATCCGCGGCATGATGATCGGCTTCTTCTTCCCCCTCGGCAGCCTG
ACCTGGCTCCTTCGCCAGGGCATCTGGAGCGACAAATGGCAGATCTTCGTCGGCTCCGGCGTCGTCCTCAGTCTC
ACCGTCGGCGTCGTCATGGGCATCTCGGGAGATCATTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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