Protein ID | Hirsu2|9854 |
Gene name | |
Location | Contig_75:2719..3130 |
Strand | + |
Gene length (bp) | 411 |
Transcript length (bp) | 294 |
Coding sequence length (bp) | 294 |
Protein length (aa) | 98 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01679 | Pmp3 | Proteolipid membrane potential modulator | 1.3E-20 | 7 | 54 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4WYA5|PMP3_ASPFU | Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1 | 4 | 56 | 8.0E-13 |
sp|Q4HXT6|PMP3_GIBZE | Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 | 4 | 56 | 5.0E-11 |
sp|Q871V2|PMP3_NEUCR | Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 | 4 | 56 | 7.0E-11 |
sp|Q9C1W4|PMP3_SCHPO | Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 | 5 | 56 | 4.0E-08 |
sp|Q22702|YCU5_CAEEL | UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1 | 11 | 56 | 9.0E-08 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q4WYA5|PMP3_ASPFU | Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1 | 4 | 56 | 8.0E-13 |
sp|Q4HXT6|PMP3_GIBZE | Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 | 4 | 56 | 5.0E-11 |
sp|Q871V2|PMP3_NEUCR | Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 | 4 | 56 | 7.0E-11 |
sp|Q9C1W4|PMP3_SCHPO | Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 | 5 | 56 | 4.0E-08 |
sp|Q22702|YCU5_CAEEL | UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1 | 11 | 56 | 9.0E-08 |
sp|P0AE42|YQAE_ECOLI | UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12) GN=yqaE PE=3 SV=1 | 10 | 53 | 1.0E-07 |
sp|P0AE43|YQAE_ECOL6 | UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1 | 10 | 53 | 1.0E-07 |
sp|P0AE44|YQAE_ECO57 | UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE PE=3 SV=1 | 10 | 53 | 1.0E-07 |
sp|P34655|YOT0_CAEEL | UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans GN=ZK632.10 PE=3 SV=2 | 7 | 52 | 2.0E-07 |
sp|Q9Y068|RIC1_PHYIN | Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1 | 10 | 52 | 3.0E-07 |
sp|Q9ZNQ7|RCI2A_ARATH | Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1 | 10 | 52 | 6.0E-07 |
sp|Q9M095|RC23_ARATH | UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1 | 10 | 73 | 4.0E-06 |
sp|Q6BVN0|PMP3_DEBHA | Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PMP3 PE=3 SV=1 | 16 | 56 | 5.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0005575 | cellular_component | No |
GO:0110165 | cellular anatomical entity | No |
GO:0031224 | intrinsic component of membrane | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Lysosome/Vacuole | Transmembrane domain | 0.1191 | 0.1111 | 0.0958 | 0.7631 | 0.3449 | 0.085 | 0.605 | 0.7044 | 0.6124 | 0.0134 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 26 | 19 |
2 | 31 | 50 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 5797 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9854 MGVASTVLLVLVTILFPPAGVWAVAGCGMDLFINVCLTLLGYIPGHLHAFYIEYVYYDRREQAHEGRFPTGPAPG VYSDNVQTGGQGYGTMAAQPVA* |
Coding | >Hirsu2|9854 ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTTTCCCCCCGCCGGTGTCTGGGCCGTGGCA GGCTGCGGAATGGACCTCTTCATCAACGTCTGCCTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTC TACATCGAGTACGTCTACTACGATCGTCGCGAGCAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGC GTCTACTCGGACAACGTCCAAACCGGCGGCCAGGGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG |
Transcript | >Hirsu2|9854 ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTTTCCCCCCGCCGGTGTCTGGGCCGTGGCA GGCTGCGGAATGGACCTCTTCATCAACGTCTGCCTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTC TACATCGAGTACGTCTACTACGATCGTCGCGAGCAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGC GTCTACTCGGACAACGTCCAAACCGGCGGCCAGGGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG |
Gene | >Hirsu2|9854 ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTGTAGGGCCTCTGTCGTCGCGCGGGGCCCG AGCGTGTTTGCTGACCTGTCTCGCAGTTCCCCCCGCCGGTGTCTGGGCCGTGGCAGGCTGCGGAATGGGTTCGTG GCGGACGGCGGATGCGCGTGCCGGAGACAAGGGCGGCCTGCTAATGTTCGTCTAGACCTCTTCATCAACGTCTGC CTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTCTACATCGAGTACGTCTACTACGATCGTCGCGAG CAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGCGTCTACTCGGACAACGTCCAAACCGGCGGCCAG GGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG |