Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9854
Gene name
LocationContig_75:2719..3130
Strand+
Gene length (bp)411
Transcript length (bp)294
Coding sequence length (bp)294
Protein length (aa) 98

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01679 Pmp3 Proteolipid membrane potential modulator 1.3E-20 7 54

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1 4 56 8.0E-13
sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 4 56 5.0E-11
sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 4 56 7.0E-11
sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 5 56 4.0E-08
sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1 11 56 9.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q4WYA5|PMP3_ASPFU Plasma membrane proteolipid 3 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pmp3 PE=3 SV=1 4 56 8.0E-13
sp|Q4HXT6|PMP3_GIBZE Plasma membrane proteolipid 3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PMP3 PE=3 SV=2 4 56 5.0E-11
sp|Q871V2|PMP3_NEUCR Plasma membrane proteolipid 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pmp-1 PE=3 SV=1 4 56 7.0E-11
sp|Q9C1W4|PMP3_SCHPO Plasma membrane proteolipid 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pmp3 PE=3 SV=2 5 56 4.0E-08
sp|Q22702|YCU5_CAEEL UPF0057 membrane protein T23F2.5 OS=Caenorhabditis elegans GN=T23F2.5 PE=3 SV=1 11 56 9.0E-08
sp|P0AE42|YQAE_ECOLI UPF0057 membrane protein YqaE OS=Escherichia coli (strain K12) GN=yqaE PE=3 SV=1 10 53 1.0E-07
sp|P0AE43|YQAE_ECOL6 UPF0057 membrane protein YqaE OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yqaE PE=3 SV=1 10 53 1.0E-07
sp|P0AE44|YQAE_ECO57 UPF0057 membrane protein YqaE OS=Escherichia coli O157:H7 GN=yqaE PE=3 SV=1 10 53 1.0E-07
sp|P34655|YOT0_CAEEL UPF0057 membrane protein ZK632.10 OS=Caenorhabditis elegans GN=ZK632.10 PE=3 SV=2 7 52 2.0E-07
sp|Q9Y068|RIC1_PHYIN Protein Ric1 OS=Phytophthora infestans GN=RIC1 PE=3 SV=1 10 52 3.0E-07
sp|Q9ZNQ7|RCI2A_ARATH Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1 10 52 6.0E-07
sp|Q9M095|RC23_ARATH UPF0057 membrane protein At4g30650 OS=Arabidopsis thaliana GN=At4g30650 PE=3 SV=1 10 73 4.0E-06
sp|Q6BVN0|PMP3_DEBHA Plasma membrane proteolipid 3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=PMP3 PE=3 SV=1 16 56 5.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Transmembrane domain 0.1191 0.1111 0.0958 0.7631 0.3449 0.085 0.605 0.7044 0.6124 0.0134

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 31 50 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5797
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2639
Ophiocordyceps australis map64 (Brazil) OphauB2|5535
Ophiocordyceps camponoti-floridani Ophcf2|00584
Ophiocordyceps camponoti-rufipedis Ophun1|322
Ophiocordyceps kimflemingae Ophio5|7708
Ophiocordyceps subramaniannii Hirsu2|9854 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9854
MGVASTVLLVLVTILFPPAGVWAVAGCGMDLFINVCLTLLGYIPGHLHAFYIEYVYYDRREQAHEGRFPTGPAPG
VYSDNVQTGGQGYGTMAAQPVA*
Coding >Hirsu2|9854
ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTTTCCCCCCGCCGGTGTCTGGGCCGTGGCA
GGCTGCGGAATGGACCTCTTCATCAACGTCTGCCTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTC
TACATCGAGTACGTCTACTACGATCGTCGCGAGCAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGC
GTCTACTCGGACAACGTCCAAACCGGCGGCCAGGGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG
Transcript >Hirsu2|9854
ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTTTCCCCCCGCCGGTGTCTGGGCCGTGGCA
GGCTGCGGAATGGACCTCTTCATCAACGTCTGCCTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTC
TACATCGAGTACGTCTACTACGATCGTCGCGAGCAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGC
GTCTACTCGGACAACGTCCAAACCGGCGGCCAGGGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG
Gene >Hirsu2|9854
ATGGGTGTCGCATCGACGGTCCTCCTCGTGCTCGTCACCATCCTCTGTAGGGCCTCTGTCGTCGCGCGGGGCCCG
AGCGTGTTTGCTGACCTGTCTCGCAGTTCCCCCCGCCGGTGTCTGGGCCGTGGCAGGCTGCGGAATGGGTTCGTG
GCGGACGGCGGATGCGCGTGCCGGAGACAAGGGCGGCCTGCTAATGTTCGTCTAGACCTCTTCATCAACGTCTGC
CTGACCCTGCTGGGGTACATACCCGGGCACCTGCATGCCTTCTACATCGAGTACGTCTACTACGATCGTCGCGAG
CAGGCCCACGAGGGCCGTTTCCCAACCGGCCCTGCCCCGGGCGTCTACTCGGACAACGTCCAAACCGGCGGCCAG
GGCTACGGCACCATGGCCGCGCAGCCTGTCGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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