Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9826
Gene name
Location	Contig_743:3283..5129
Strand	-
Gene length (bp)	1846
Transcript length (bp)	1722
Coding sequence length (bp)	1722
Protein length (aa)	574

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03547	Mem_trans	Membrane transport protein	7.0E-52	47	557

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38355\|YB8B_YEAST	Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1	39	210	2.0E-50
sp\|O14197\|YDQ4_SCHPO	Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1	47	262	5.0E-48
sp\|P38355\|YB8B_YEAST	Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1	394	570	9.0E-41
sp\|O14197\|YDQ4_SCHPO	Uncharacterized transporter C5D6.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC5D6.04 PE=3 SV=1	289	570	6.0E-35

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0055085	transmembrane transport	Yes
GO:0031224	intrinsic component of membrane	No
GO:0009987	cellular process	No
GO:0110165	cellular anatomical entity	No
GO:0051179	localization	No
GO:0005575	cellular_component	No
GO:0008150	biological_process	No
GO:0051234	establishment of localization	No
GO:0006810	transport	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 49	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	43	65	22
2	78	97	19
3	107	129	22
4	388	410	22
5	430	452	22
6	473	495	22
7	508	530	22
8	543	565	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9826 MDSSGLYSGAVSYRLANLAQHAYDYPMAVLQAPTQGHPSLPHLCLLVFEAVLEVVCVSLPGYIIARLGHFDADKQ KFLANLNVMLFTPCLIFTKLASQLNAEKLSELAIIPAIFVVQTLISWIVSTLIAKAFRFNKRASNFVTAMGVFGN SNSLPISLVLSLSQTIKGLHWDRIPGDNDDEVGARGILYLLIFQQLGQLVRWSWGYHVLLATKDKYPEYQQQIAE EGQCRYEEDHNEHEAQGLIEGVDGETEDEEEGHSVDSRTYVPAGRTPVAGTSRTSADSSDDDEFAPKKPASRHPT APRTDQPPFGRDDEDAFTFPRVGNGNGAHSPEAKPDGIGARLKASVVGKFRSARAATAGYFGRLGQRFPRPVRLF ASFVATAGAKTANFIWEFMNPPLWAMLIAVMVASIPSLQRLFFEEDSFVNNSVTSAVKSSGGVAVPLILVVLGAN LARNTMAREDDHDPEEEQIGTKLLIASLLSRMVLPTAIMAPILALMAKYLPVSILDDPIFIVVCFLLTGAPSALQ LAQICQINNVYEKTMGRVLFQSYVIWILPSTLVLVMMALEVVEWAAVS*
Coding	>Hirsu2\|9826 ATGGACTCTTCCGGTCTCTACTCGGGCGCGGTCTCGTATCGCCTCGCCAACCTCGCCCAACATGCCTACGACTAC CCGATGGCCGTCCTCCAGGCCCCGACCCAGGGCCACCCTTCGCTCCCCCATCTGTGCCTCCTCGTCTTCGAGGCC GTTCTCGAGGTCGTCTGCGTCAGCCTTCCGGGCTACATCATTGCCCGCCTGGGCCACTTTGATGCCGACAAGCAA AAGTTCTTGGCCAATCTCAACGTCATGCTCTTCACCCCGTGCCTCATCTTCACCAAGCTGGCCTCCCAGCTCAAT GCCGAGAAACTCTCCGAACTCGCCATTATCCCGGCCATTTTCGTCGTCCAGACCCTGATATCTTGGATCGTATCC ACCTTGATCGCCAAGGCCTTCCGGTTCAACAAGCGGGCCTCCAATTTCGTCACGGCCATGGGCGTCTTTGGCAAC TCTAATTCTCTGCCAATCTCTCTTGTCCTCTCCCTCTCGCAGACCATCAAGGGCCTTCATTGGGACAGAATCCCG GGAGACAACGACGACGAGGTCGGTGCCCGGGGCATCCTGTACCTCCTCATCTTTCAGCAGCTCGGCCAGCTCGTC CGATGGAGCTGGGGGTACCACGTCTTGCTGGCCACCAAGGACAAGTACCCTGAGTACCAGCAGCAGATTGCCGAG GAGGGACAATGCCGCTATGAGGAGGACCACAACGAACACGAGGCGCAGGGACTCATCGAGGGCGTCGACGGCGAG ACGGAAGACGAGGAGGAGGGTCATAGTGTGGACTCTCGAACGTACGTGCCCGCGGGCAGGACCCCGGTCGCTGGG ACCTCGAGAACGTCGGCCGACTCGAGCGACGACGACGAGTTCGCTCCTAAGAAGCCCGCATCCCGACACCCGACG GCGCCGCGAACCGACCAACCCCCCTTCGGCAGAGACGATGAAGATGCCTTCACCTTCCCCCGCGTCGGTAACGGT AATGGCGCTCATTCGCCCGAGGCCAAGCCCGACGGCATTGGGGCTCGCCTTAAAGCATCCGTCGTTGGCAAGTTC CGTTCCGCGCGAGCTGCTACTGCTGGCTATTTTGGGCGTCTCGGCCAGCGCTTTCCTCGGCCTGTTCGGCTGTTC GCGTCCTTCGTGGCCACCGCCGGCGCCAAGACGGCCAACTTCATCTGGGAGTTTATGAATCCGCCTCTGTGGGCG ATGCTGATCGCCGTCATGGTGGCCTCGATCCCCTCACTGCAGCGGCTCTTCTTTGAAGAGGATTCGTTTGTGAAC AACAGCGTGACGAGTGCCGTCAAATCCAGCGGAGGGGTGGCCGTCCCCCTGATTCTCGTCGTTCTGGGAGCCAAT CTGGCGCGAAATACCATGGCGCGCGAAGACGACCACGACCCCGAAGAGGAACAGATCGGAACCAAGCTCCTCATC GCCTCCTTGCTGAGCCGCATGGTCCTACCCACTGCCATCATGGCCCCCATCCTGGCCTTGATGGCGAAATACCTG CCCGTCAGCATCCTCGACGACCCCATCTTCATTGTCGTTTGCTTTCTCCTCACCGGCGCGCCCAGCGCCCTGCAG CTGGCTCAGATCTGCCAGATCAACAACGTGTACGAGAAGACAATGGGCCGGGTCCTTTTCCAGAGCTACGTGATA TGGATCCTTCCATCCACCTTGGTTCTTGTCATGATGGCACTCGAAGTCGTGGAGTGGGCGGCTGTCTCATGA
Transcript	>Hirsu2\|9826 ATGGACTCTTCCGGTCTCTACTCGGGCGCGGTCTCGTATCGCCTCGCCAACCTCGCCCAACATGCCTACGACTAC CCGATGGCCGTCCTCCAGGCCCCGACCCAGGGCCACCCTTCGCTCCCCCATCTGTGCCTCCTCGTCTTCGAGGCC GTTCTCGAGGTCGTCTGCGTCAGCCTTCCGGGCTACATCATTGCCCGCCTGGGCCACTTTGATGCCGACAAGCAA AAGTTCTTGGCCAATCTCAACGTCATGCTCTTCACCCCGTGCCTCATCTTCACCAAGCTGGCCTCCCAGCTCAAT GCCGAGAAACTCTCCGAACTCGCCATTATCCCGGCCATTTTCGTCGTCCAGACCCTGATATCTTGGATCGTATCC ACCTTGATCGCCAAGGCCTTCCGGTTCAACAAGCGGGCCTCCAATTTCGTCACGGCCATGGGCGTCTTTGGCAAC TCTAATTCTCTGCCAATCTCTCTTGTCCTCTCCCTCTCGCAGACCATCAAGGGCCTTCATTGGGACAGAATCCCG GGAGACAACGACGACGAGGTCGGTGCCCGGGGCATCCTGTACCTCCTCATCTTTCAGCAGCTCGGCCAGCTCGTC CGATGGAGCTGGGGGTACCACGTCTTGCTGGCCACCAAGGACAAGTACCCTGAGTACCAGCAGCAGATTGCCGAG GAGGGACAATGCCGCTATGAGGAGGACCACAACGAACACGAGGCGCAGGGACTCATCGAGGGCGTCGACGGCGAG ACGGAAGACGAGGAGGAGGGTCATAGTGTGGACTCTCGAACGTACGTGCCCGCGGGCAGGACCCCGGTCGCTGGG ACCTCGAGAACGTCGGCCGACTCGAGCGACGACGACGAGTTCGCTCCTAAGAAGCCCGCATCCCGACACCCGACG GCGCCGCGAACCGACCAACCCCCCTTCGGCAGAGACGATGAAGATGCCTTCACCTTCCCCCGCGTCGGTAACGGT AATGGCGCTCATTCGCCCGAGGCCAAGCCCGACGGCATTGGGGCTCGCCTTAAAGCATCCGTCGTTGGCAAGTTC CGTTCCGCGCGAGCTGCTACTGCTGGCTATTTTGGGCGTCTCGGCCAGCGCTTTCCTCGGCCTGTTCGGCTGTTC GCGTCCTTCGTGGCCACCGCCGGCGCCAAGACGGCCAACTTCATCTGGGAGTTTATGAATCCGCCTCTGTGGGCG ATGCTGATCGCCGTCATGGTGGCCTCGATCCCCTCACTGCAGCGGCTCTTCTTTGAAGAGGATTCGTTTGTGAAC AACAGCGTGACGAGTGCCGTCAAATCCAGCGGAGGGGTGGCCGTCCCCCTGATTCTCGTCGTTCTGGGAGCCAAT CTGGCGCGAAATACCATGGCGCGCGAAGACGACCACGACCCCGAAGAGGAACAGATCGGAACCAAGCTCCTCATC GCCTCCTTGCTGAGCCGCATGGTCCTACCCACTGCCATCATGGCCCCCATCCTGGCCTTGATGGCGAAATACCTG CCCGTCAGCATCCTCGACGACCCCATCTTCATTGTCGTTTGCTTTCTCCTCACCGGCGCGCCCAGCGCCCTGCAG CTGGCTCAGATCTGCCAGATCAACAACGTGTACGAGAAGACAATGGGCCGGGTCCTTTTCCAGAGCTACGTGATA TGGATCCTTCCATCCACCTTGGTTCTTGTCATGATGGCACTCGAAGTCGTGGAGTGGGCGGCTGTCTCATGA
Gene	>Hirsu2\|9826 ATGGACTCTTCCGGTCTCTACTCGGGCGCGGTCTCGTATCGCCTCGCCAACCTCGCCCAACATGCCTACGACTAC CCGATGGCCGTCCTCCAGGCCCCGACCCAGGGCCACCCTTCGCTCCCCCATCTGTGCCTCCTCGTCTTCGAGGCC GTTCTCGAGGTCGTCTGCGTCAGCCTTCCGGGCTACATCATTGCCCGCCTGGGCCACTTTGATGCCGACAAGCAA AAGTTCTTGGCCAATCTCAACGTCATGCTCTTCACCCCGTGCCTCAGTAAGCCCTCGGTTTCGTCTCGTCTCTTT CTTCTTCGGTCTGATCTGACCCAATCGTTCCGCAGTCTTCACCAAGCTGGCCTCCCAGCTCAATGCCGAGAAACT CTCCGAACTCGCCATTATCCCGGCCATTTTCGTCGTCCAGACCCTGATATCTTGGATCGTATCCACCTTGATCGC CAAGGCCTTCCGGTTCAACAAGCGGGCCTCCAATTTCGTCACGGCCATGGGCGTCTTTGGCAACTCTAATTCTCT GCCAATCTCTCTTGTCCTCTCCCTCTCGCAGACCATCAAGGGCCTTCATTGGGACAGAATCCCGGGAGACAACGA CGACGAGGTCGGTGCCCGGGGCATCCTGTACCTCCTCATCTTTCAGCAGCTCGGCCAGCTCGTCCGATGGAGCTG GGGGTACCACGTCTTGCTGGCCACCAAGGACAAGTACCCTGAGTACCAGCAGCAGATTGCCGAGGAGGGACAATG CCGCTATGAGGAGGACCACAACGAACACGAGGCGCAGGGACTCATCGAGGGCGTCGACGGCGAGACGGAAGACGA GGAGGAGGGTCATAGTGTGGACTCTCGAACGTACGTGCCCGCGGGCAGGACCCCGGTCGCTGGGACCTCGAGAAC GTCGGCCGACTCGAGCGACGACGACGAGTTCGCTCCTAAGAAGCCCGCATCCCGACACCCGACGGCGCCGCGAAC CGACCAACCCCCCTTCGGCAGAGACGATGAAGATGCCTTCACCTTCCCCCGCGTCGGTAACGGTAATGGCGCTCA TTCGCCCGAGGCCAAGCCCGACGGCATTGGGGCTCGCCTTAAAGCATCCGTCGTTGGCAAGTTCCGTTCCGCGCG AGCTGCTACTGCTGGCTATTTTGGGCGTCTCGGCCAGCGCTTTCCTCGGCCTGTTCGGCTGTTCGCGTCCTTCGT GGCCACCGCCGGCGCCAAGACGGCCAACTTCATCTGGGAGTTTATGAATCCGCCTCTGTGGGCGATGCTGATCGC CGTCATGGTGGCCTCGATCCCCTCACTGCAGCGGCTCTTCTTTGAAGAGGATTCGTTTGTGAACAACAGCGTGAC GAGTGCCGTCAAATCCAGCGGAGGGGTGGCCGTCCCCCTGATTCTCGTCGTTCTGGGAGCCAATCTGGCGCGAAA TACCATGGCGCGCGAAGACGACCACGACCCCGAAGAGGAACAGATCGGAACCAAGCTCCTCATCGCCTCCTTGCT GAGCCGCATGGTCCTACCCACTGCCATCATGGCCCCCATCCTGGCCTTGATGGCGAAATACCTGCCCGTCAGCAT CCTCGACGACCCCATCTTCATTGTCGTTTGCTTTCTCCTCACCGGCGCGCCCAGCGCCCTGCAGCTGGCTCAGAT CTGCCAGATCAACAACGTGTACGAGAAGACAATGGGCCGGGTCCTTTTCCAGAGCTACGTGATATGGTGAGTCAA CGGTGCCAACTCCTGCCGTGCGCACACCGATGAAAGCTGACTGTGGACCAGGATCCTTCCATCCACCTTGGTTCT TGTCATGATGGCACTCGAAGTCGTGGAGTGGGCGGCTGTCTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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