© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9819 |
| Gene name | |
| Location | Contig_741:10632..12976 |
| Strand | + |
| Gene length (bp) | 2344 |
| Transcript length (bp) | 2082 |
| Coding sequence length (bp) | 2082 |
| Protein length (aa) | 694 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07885 | Ion_trans_2 | Ion channel | 1.7E-15 | 216 | 289 |
| PF07885 | Ion_trans_2 | Ion channel | 2.9E-20 | 378 | 455 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40310|TOK1_YEAST | Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 | 15 | 466 | 6.0E-62 |
| sp|P40310|TOK1_YEAST | Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 | 205 | 339 | 3.0E-12 |
| sp|Q9HB14|KCNKD_HUMAN | Potassium channel subfamily K member 13 OS=Homo sapiens GN=KCNK13 PE=2 SV=2 | 235 | 427 | 2.0E-10 |
| sp|Q8R5I0|KCNKF_RAT | Potassium channel subfamily K member 15 OS=Rattus norvegicus GN=Kcnk15 PE=2 SV=1 | 331 | 459 | 2.0E-08 |
| sp|Q9Y257|KCNK6_HUMAN | Potassium channel subfamily K member 6 OS=Homo sapiens GN=KCNK6 PE=1 SV=1 | 369 | 438 | 1.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40310|TOK1_YEAST | Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 | 15 | 466 | 6.0E-62 |
| sp|P40310|TOK1_YEAST | Outward-rectifier potassium channel TOK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TOK1 PE=1 SV=1 | 205 | 339 | 3.0E-12 |
| sp|Q9HB14|KCNKD_HUMAN | Potassium channel subfamily K member 13 OS=Homo sapiens GN=KCNK13 PE=2 SV=2 | 235 | 427 | 2.0E-10 |
| sp|Q8R5I0|KCNKF_RAT | Potassium channel subfamily K member 15 OS=Rattus norvegicus GN=Kcnk15 PE=2 SV=1 | 331 | 459 | 2.0E-08 |
| sp|Q9Y257|KCNK6_HUMAN | Potassium channel subfamily K member 6 OS=Homo sapiens GN=KCNK6 PE=1 SV=1 | 369 | 438 | 1.0E-06 |
| sp|Q9ES08|KCNK9_RAT | Potassium channel subfamily K member 9 OS=Rattus norvegicus GN=Kcnk9 PE=1 SV=2 | 392 | 459 | 1.0E-06 |
| sp|Q9JL58|KCNK9_CAVPO | Potassium channel subfamily K member 9 OS=Cavia porcellus GN=KCNK9 PE=1 SV=1 | 392 | 459 | 1.0E-06 |
| sp|O14649|KCNK3_HUMAN | Potassium channel subfamily K member 3 OS=Homo sapiens GN=KCNK3 PE=1 SV=1 | 394 | 459 | 1.0E-06 |
| sp|Q3LS21|KCNK9_MOUSE | Potassium channel subfamily K member 9 OS=Mus musculus GN=Kcnk9 PE=2 SV=1 | 392 | 459 | 1.0E-06 |
| sp|Q3LS21|KCNK9_MOUSE | Potassium channel subfamily K member 9 OS=Mus musculus GN=Kcnk9 PE=2 SV=1 | 222 | 309 | 2.0E-06 |
| sp|Q6UVM3|KCNT2_HUMAN | Potassium channel subfamily T member 2 OS=Homo sapiens GN=KCNT2 PE=1 SV=1 | 355 | 445 | 2.0E-06 |
| sp|Q6UVM4|KCNT2_RAT | Potassium channel subfamily T member 2 OS=Rattus norvegicus GN=Kcnt2 PE=1 SV=1 | 355 | 445 | 2.0E-06 |
| sp|Q9H427|KCNKF_HUMAN | Potassium channel subfamily K member 15 OS=Homo sapiens GN=KCNK15 PE=1 SV=2 | 392 | 459 | 2.0E-06 |
| sp|Q9NPC2|KCNK9_HUMAN | Potassium channel subfamily K member 9 OS=Homo sapiens GN=KCNK9 PE=1 SV=1 | 392 | 459 | 2.0E-06 |
| sp|O54912|KCNK3_RAT | Potassium channel subfamily K member 3 OS=Rattus norvegicus GN=Kcnk3 PE=2 SV=1 | 394 | 459 | 4.0E-06 |
| sp|O35111|KCNK3_MOUSE | Potassium channel subfamily K member 3 OS=Mus musculus GN=Kcnk3 PE=1 SV=2 | 394 | 459 | 4.0E-06 |
| sp|O17185|SUP9_CAEEL | Two pore potassium channel protein sup-9 OS=Caenorhabditis elegans GN=sup-9 PE=1 SV=2 | 225 | 292 | 4.0E-06 |
| sp|Q63ZI0|KCNK9_XENLA | Potassium channel subfamily K member 9 OS=Xenopus laevis GN=kcnk9 PE=2 SV=1 | 392 | 459 | 5.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 93 | 115 | 22 |
| 3 | 130 | 152 | 22 |
| 4 | 173 | 195 | 22 |
| 5 | 210 | 229 | 19 |
| 6 | 236 | 258 | 22 |
| 7 | 268 | 290 | 22 |
| 8 | 368 | 390 | 22 |
| 9 | 400 | 419 | 19 |
| 10 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9819 MNHDDPENPPEPRLRASEAQLRPELPREVRFRHDNAHLVPARWWFASSAFPMVAGTLGPVASAFSICALVRPWRQ LFPRGAQVQQTSFVTDPHWLTAINALQLVVALVSNLLLLLNMAKRVRFTLAQPITIVGWYISAICLVALTATAAG PLDQGLQRPTEEYIWSEAFYYGIWAAILYFVDASLMVVTFWGAFLGYYDKDFNLTASQRTLMLQTIMVLAYLLLG ALVFSKIEDWAYLDAVYWADVTLFTVGFGDFAASTHAGRALVVPYALVGIISLGLVVSSIRSLMLERGSRRLDAR VQEKNRRRVLRTITRRGNDDILTPLPRELSLDADEDEADESEFGELRRRRSEFGLMRAIQNTASVRRRWLAMAIS TTIWLLLWLVGAAIFRECERSSQSWTYFDSFYFCFVSLMTIGYGDRTPKSNAGKSFFVFWSLLALPTMTVLISNA GDTVVKLVRDGTIRLGNVTILPGDHGASGSPDHFSLRRACRLALSGTSGVVRGLERLARGIEKSPSGDPSVDAGP AGEPGQSEPGRPATRSGLLVPTTTAERSSLSRIRSRLDALPDGDDYRLLLISEIQGVSRHVRHDKSRRYTFEEWA CRGIIVSGTAAATATATATTTXXXXXXXXXXXXXXXXXXXXDDGDEDDQLKWSWVGTRSPLVGGHEEGEWILERL MDRLKESLWTAAHEADDG* |
| Coding | >Hirsu2|9819 ATGAACCATGACGACCCGGAGAACCCCCCCGAACCGCGTCTTCGTGCCTCCGAGGCCCAGCTCCGGCCCGAACTC CCCCGGGAGGTCCGGTTTCGACATGACAACGCCCACCTCGTCCCCGCCCGCTGGTGGTTCGCCTCCTCTGCCTTT CCCATGGTGGCCGGCACGCTGGGCCCCGTCGCCTCGGCCTTCAGCATCTGCGCCCTCGTGCGCCCATGGCGGCAG CTCTTCCCTCGCGGCGCACAAGTTCAGCAAACTTCCTTTGTGACCGACCCTCACTGGCTCACCGCCATCAATGCT CTGCAGCTGGTCGTAGCCCTCGTGTCCAACCTTCTGCTCCTCCTGAACATGGCGAAGCGGGTGCGCTTCACCCTT GCTCAGCCCATCACAATCGTCGGCTGGTACATCTCCGCAATCTGCCTCGTGGCCCTCACTGCTACCGCCGCCGGA CCCCTCGACCAGGGCCTGCAGCGACCGACCGAGGAGTACATCTGGTCCGAGGCCTTCTACTACGGCATCTGGGCC GCCATTCTCTACTTCGTCGACGCCTCGCTCATGGTCGTCACCTTTTGGGGCGCCTTTTTGGGCTACTACGATAAG GACTTCAACCTGACGGCCAGTCAGCGCACCCTCATGCTGCAGACCATCATGGTCCTCGCCTACCTTCTCCTCGGC GCCCTCGTCTTCTCCAAGATCGAGGACTGGGCCTACCTGGATGCCGTCTACTGGGCAGACGTGACGCTCTTCACC GTCGGCTTCGGCGACTTCGCCGCCTCCACCCACGCCGGCCGCGCGCTGGTGGTCCCGTACGCACTCGTCGGCATC ATCAGTCTCGGCCTGGTAGTCAGCTCGATCCGGAGCCTGATGCTCGAGCGCGGCAGTCGCCGGCTCGACGCCCGC GTCCAGGAGAAGAACCGCCGCAGAGTGCTGCGGACCATAACGCGCAGGGGCAACGACGACATCCTGACCCCGCTC CCCCGAGAGCTCTCCCTCGACGCGGACGAGGACGAGGCCGACGAGAGCGAGTTCGGCGAGCTCCGGCGGCGCCGG TCCGAGTTCGGACTGATGCGCGCCATCCAGAATACGGCCTCGGTGCGGAGGAGGTGGCTGGCCATGGCCATCTCC ACCACCATCTGGCTGCTCCTCTGGCTCGTCGGCGCCGCCATCTTCCGCGAATGCGAGCGGTCGTCGCAGTCCTGG ACCTACTTCGACTCGTTCTACTTCTGCTTCGTCTCCCTCATGACCATCGGCTACGGCGACAGGACGCCCAAGTCC AACGCCGGCAAGTCCTTCTTCGTCTTCTGGTCCCTGCTGGCCCTGCCCACCATGACGGTCCTCATCTCCAACGCC GGCGACACCGTCGTCAAGCTCGTCCGGGACGGCACCATCCGCCTCGGCAACGTGACCATCCTGCCCGGCGACCAC GGCGCGAGCGGGAGCCCCGACCACTTCAGCCTCCGCAGGGCCTGCCGCCTGGCCTTGAGCGGCACGAGCGGCGTC GTGCGTGGTCTCGAGCGGCTGGCGCGCGGCATCGAGAAATCGCCGTCGGGGGACCCGTCGGTCGACGCCGGCCCG GCCGGCGAGCCCGGCCAGTCGGAGCCCGGCCGGCCGGCCACCCGGAGCGGCCTGCTGGTGCCGACGACGACGGCG GAGCGGAGCTCGCTGTCGCGCATCCGCAGCCGGCTCGACGCCCTGCCGGACGGCGACGACTACCGCCTGCTGCTC ATCTCGGAGATCCAGGGCGTCAGCCGGCACGTGCGGCACGACAAGAGCCGGCGCTACACGTTCGAGGAGTGGGCC TGCCGAGGCATCATCGTCAGCGGCACCGCCGCCGCCACGGCAACCGCCACCGCCACCACCACCANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGACGATGGCGACGAGGACGACCAGCTC AAGTGGTCGTGGGTCGGGACCCGCAGCCCCCTGGTGGGCGGGCACGAGGAGGGCGAGTGGATCCTGGAGAGGCTG ATGGACCGGCTCAAGGAGTCGCTGTGGACGGCGGCGCACGAGGCCGACGACGGCTGA |
| Transcript | >Hirsu2|9819 ATGAACCATGACGACCCGGAGAACCCCCCCGAACCGCGTCTTCGTGCCTCCGAGGCCCAGCTCCGGCCCGAACTC CCCCGGGAGGTCCGGTTTCGACATGACAACGCCCACCTCGTCCCCGCCCGCTGGTGGTTCGCCTCCTCTGCCTTT CCCATGGTGGCCGGCACGCTGGGCCCCGTCGCCTCGGCCTTCAGCATCTGCGCCCTCGTGCGCCCATGGCGGCAG CTCTTCCCTCGCGGCGCACAAGTTCAGCAAACTTCCTTTGTGACCGACCCTCACTGGCTCACCGCCATCAATGCT CTGCAGCTGGTCGTAGCCCTCGTGTCCAACCTTCTGCTCCTCCTGAACATGGCGAAGCGGGTGCGCTTCACCCTT GCTCAGCCCATCACAATCGTCGGCTGGTACATCTCCGCAATCTGCCTCGTGGCCCTCACTGCTACCGCCGCCGGA CCCCTCGACCAGGGCCTGCAGCGACCGACCGAGGAGTACATCTGGTCCGAGGCCTTCTACTACGGCATCTGGGCC GCCATTCTCTACTTCGTCGACGCCTCGCTCATGGTCGTCACCTTTTGGGGCGCCTTTTTGGGCTACTACGATAAG GACTTCAACCTGACGGCCAGTCAGCGCACCCTCATGCTGCAGACCATCATGGTCCTCGCCTACCTTCTCCTCGGC GCCCTCGTCTTCTCCAAGATCGAGGACTGGGCCTACCTGGATGCCGTCTACTGGGCAGACGTGACGCTCTTCACC GTCGGCTTCGGCGACTTCGCCGCCTCCACCCACGCCGGCCGCGCGCTGGTGGTCCCGTACGCACTCGTCGGCATC ATCAGTCTCGGCCTGGTAGTCAGCTCGATCCGGAGCCTGATGCTCGAGCGCGGCAGTCGCCGGCTCGACGCCCGC GTCCAGGAGAAGAACCGCCGCAGAGTGCTGCGGACCATAACGCGCAGGGGCAACGACGACATCCTGACCCCGCTC CCCCGAGAGCTCTCCCTCGACGCGGACGAGGACGAGGCCGACGAGAGCGAGTTCGGCGAGCTCCGGCGGCGCCGG TCCGAGTTCGGACTGATGCGCGCCATCCAGAATACGGCCTCGGTGCGGAGGAGGTGGCTGGCCATGGCCATCTCC ACCACCATCTGGCTGCTCCTCTGGCTCGTCGGCGCCGCCATCTTCCGCGAATGCGAGCGGTCGTCGCAGTCCTGG ACCTACTTCGACTCGTTCTACTTCTGCTTCGTCTCCCTCATGACCATCGGCTACGGCGACAGGACGCCCAAGTCC AACGCCGGCAAGTCCTTCTTCGTCTTCTGGTCCCTGCTGGCCCTGCCCACCATGACGGTCCTCATCTCCAACGCC GGCGACACCGTCGTCAAGCTCGTCCGGGACGGCACCATCCGCCTCGGCAACGTGACCATCCTGCCCGGCGACCAC GGCGCGAGCGGGAGCCCCGACCACTTCAGCCTCCGCAGGGCCTGCCGCCTGGCCTTGAGCGGCACGAGCGGCGTC GTGCGTGGTCTCGAGCGGCTGGCGCGCGGCATCGAGAAATCGCCGTCGGGGGACCCGTCGGTCGACGCCGGCCCG GCCGGCGAGCCCGGCCAGTCGGAGCCCGGCCGGCCGGCCACCCGGAGCGGCCTGCTGGTGCCGACGACGACGGCG GAGCGGAGCTCGCTGTCGCGCATCCGCAGCCGGCTCGACGCCCTGCCGGACGGCGACGACTACCGCCTGCTGCTC ATCTCGGAGATCCAGGGCGTCAGCCGGCACGTGCGGCACGACAAGAGCCGGCGCTACACGTTCGAGGAGTGGGCC TGCCGAGGCATCATCGTCAGCGGCACCGCCGCCGCCACGGCAACCGCCACCGCCACCACCACCANNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGACGATGGCGACGAGGACGACCAGCTC AAGTGGTCGTGGGTCGGGACCCGCAGCCCCCTGGTGGGCGGGCACGAGGAGGGCGAGTGGATCCTGGAGAGGCTG ATGGACCGGCTCAAGGAGTCGCTGTGGACGGCGGCGCACGAGGCCGACGACGGCTGA |
| Gene | >Hirsu2|9819 ATGAACCATGACGACCCGGAGAACCCCCCCGAACCGCGTCTTCGTGCCTCCGAGGCCCAGCTCCGGCCCGAACTC CCCCGGGAGGTCCGGTTTCGACATGACAACGCCCACCTCGTCCCCGCGTACGACCTCACCGCCCCTGACACCCCG TCCGTCTCGTCGCTGACGCTCGCCTGCCCAGCCGCTGGTGGTTCGCCTCCTCTGCCTTTCCCATGGTGGCCGGCA CGCTGGGCCCCGTCGCCTCGGCCTTCAGCATCTGCGCCCTCGTGCGCCCATGGCGGCAGCTCTTCCCTCGCGGCG CACAAGTTCAGCAAACTTCCTTTGTGACCGACCCTCACTGGTGAGCCGAGGGGAAAGACGTGGCCCCGAACGTCC CGCCATGCCCCGGCCTGTGGGCTACTGACGCCTTGCGCCAGGCTCACCGCCATCAATGCTCTGCAGCTGGTCGTA GCCCTCGTGTCCAACCTTCTGCTCCTCCTGAACATGGCGAAGCGGGTGCGCTTCACCCTTGCTCAGCCCATCACA ATCGTCGGCTGGTAAGTAGCTGCCTGTCCATGCGGCGCAGTCGTAAGCCTGAAGCCTCACCCCAGGTACATCTCC GCAATCTGCCTCGTGGCCCTCACTGCTACCGCCGCCGGACCCCTCGACCAGGGCCTGCAGCGACCGACCGAGGAG TACATCTGGTCCGAGGCCTTCTACTACGGCATCTGGGCCGCCATTCTCTACTTCGTCGACGCCTCGCTCATGGTC GTCACCTTTTGGGGCGCCTTTTTGGGCTACTACGATAAGGACTTCAACCTGACGGCCAGTCAGCGCACCCTCATG CTGCAGACCATCATGGTCCTCGCCTACCTTCTCCTCGGCGCCCTCGTCTTCTCCAAGATCGAGGACTGGGCCTAC CTGGATGCCGTCTACTGGGCAGACGTGACGCTCTTCACCGTCGGCTTCGGCGACTTCGCCGCCTCCACCCACGCC GGCCGCGCGCTGGTGGTCCCGTACGCACTCGTCGGCATCATCAGTCTCGGCCTGGTAGTCAGCTCGATCCGGAGC CTGATGCTCGAGCGCGGCAGTCGCCGGCTCGACGCCCGCGTCCAGGAGAAGAACCGCCGCAGAGTGCTGCGGACC ATAACGCGCAGGGGCAACGACGACATCCTGACCCCGCTCCCCCGAGAGCTCTCCCTCGACGCGGACGAGGACGAG GCCGACGAGAGCGAGTTCGGCGAGCTCCGGCGGCGCCGGTCCGAGTTCGGACTGATGCGCGCCATCCAGAATACG GCCTCGGTGCGGAGGAGGTGGCTGGCCATGGCCATCTCCACCACCATCTGGCTGCTCCTCTGGCTCGTCGGCGCC GCCATCTTCCGCGAATGCGAGCGGTCGTCGCAGTCCTGGACCTACTTCGACTCGTTCTACTTCTGCTTCGTCTCC CTCATGACCATCGGCTACGGCGACAGGACGCCCAAGTCCAACGCCGGCAAGTCCTTCTTCGTCTTCTGGTCCCTG CTGGCCCTGCCCACCATGACGGTCCTCATCTCCAACGCCGGCGACACCGTCGTCAAGCTCGTCCGGGACGGCACC ATCCGCCTCGGCAACGTGACCATCCTGCCCGGCGACCACGGCGCGAGCGGGAGCCCCGACCACTTCAGCCTCCGC AGGGCCTGCCGCCTGGCCTTGAGCGGCACGAGCGGCGTCGTGCGTGGTCTCGAGCGGCTGGCGCGCGGCATCGAG AAATCGCCGTCGGGGGACCCGTCGGTCGACGCCGGCCCGGCCGGCGAGCCCGGCCAGTCGGAGCCCGGCCGGCCG GCCACCCGGAGCGGCCTGCTGGTGCCGACGACGACGGCGGAGCGGAGCTCGCTGTCGCGCATCCGCAGCCGGCTC GACGCCCTGCCGGACGGCGACGACTACCGCCTGCTGCTCATCTCGGAGATCCAGGGCGTCAGCCGGCACGTGCGG CACGACAAGAGCCGGCGCTACACGTTCGAGGAGTGGGCCTGGTACCTCGGCCTGATCGGCGAGGACGAGCGCGAC CCGCAGATGCACGACAAGGCGAGGCCGCACAAGCCGCAGCCGAGGCATCATCGTCAGCGGCACCGCCGCCGCCAC GGCAACCGCCACCGCCACCACCACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNACGACGATGGCGACGAGGACGACCAGCTCAAGTGGTCGTGGGTCGGGACCCGCAGCCCCCTGGTGGG CGGGCACGAGGAGGGCGAGTGGATCCTGGAGAGGCTGATGGACCGGCTCAAGGAGTCGCTGTGGACGGCGGCGCA CGAGGCCGACGACGGCTGA |