Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9813
Gene name
LocationContig_740:6667..7426
Strand-
Gene length (bp)759
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08787 Alginate_lyase2 Alginate lyase 5.5E-37 34 251

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1245 0.0616 0.9473 0.1136 0.1677 0.0885 0.1564 0.1269 0.1452 0.0247

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999642

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
PL7_4 1.4E-54 34 251

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5179
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|05775
Ophiocordyceps camponoti-rufipedis Ophun1|1149
Ophiocordyceps kimflemingae Ophio5|5241
Ophiocordyceps subramaniannii Hirsu2|3899
Ophiocordyceps subramaniannii Hirsu2|9813 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9813
MLLSRCSALLTLAAAVARPAAARLDPDCAPGGNFDLRHWYLQLPTGLPGRIDTVPSKGLQGCHGYNDSSFYTDRA
TGEMVLKAPGHPSLTGCATTGGSKHCRTELREVDKRSGRNTVWSPGSVNILGVTIKVVRADDGRHGTAIGQVFAL
GFGPLAEMYYSRSGRIVVGVKPKPGAKQRMTSVGQVPPGTSFHYEMSYSRHVLSVSIDGTQTLLDVSAWASPSCY
FKSGNYNQARTKAGSEVRIAAVNVTHA*
Coding >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG
Transcript >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG
Gene >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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