Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9813
Gene name
LocationContig_740:6667..7426
Strand-
Gene length (bp)759
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08787 Alginate_lyase2 Alginate lyase 6.5E-37 34 251

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9813
MLLSRCSALLTLAAAVARPAAARLDPDCAPGGNFDLRHWYLQLPTGLPGRIDTVPSKGLQGCHGYNDSSFYTDRA
TGEMVLKAPGHPSLTGCATTGGSKHCRTELREVDKRSGRNTVWSPGSVNILGVTIKVVRADDGRHGTAIGQVFAL
GFGPLAEMYYSRSGRIVVGVKPKPGAKQRMTSVGQVPPGTSFHYEMSYSRHVLSVSIDGTQTLLDVSAWASPSCY
FKSGNYNQARTKAGSEVRIAAVNVTHA*
Coding >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG
Transcript >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG
Gene >Hirsu2|9813
ATGCTCCTCTCCCGATGCTCGGCCCTCCTGACCCTGGCCGCCGCCGTGGCCCGACCGGCGGCGGCAAGGCTCGAT
CCGGATTGTGCTCCGGGAGGCAACTTCGACCTCAGACACTGGTATCTCCAACTGCCGACCGGGCTTCCCGGACGG
ATCGACACGGTTCCGAGCAAGGGCCTGCAGGGCTGCCACGGCTACAACGACAGCAGCTTCTACACGGACAGGGCG
ACGGGCGAGATGGTGCTCAAGGCCCCGGGCCATCCGTCCTTGACGGGATGCGCCACGACGGGCGGCAGCAAGCAC
TGCCGGACGGAGCTGCGCGAGGTCGACAAGCGCAGCGGGCGCAACACGGTCTGGAGCCCCGGGAGCGTCAACATT
CTCGGGGTGACGATCAAGGTGGTCAGGGCCGACGACGGCCGGCACGGGACGGCCATCGGCCAAGTCTTTGCCCTG
GGCTTCGGGCCCCTGGCCGAGATGTACTACAGCCGAAGCGGGCGGATCGTGGTCGGGGTGAAGCCGAAGCCCGGC
GCAAAGCAGCGGATGACGAGCGTGGGCCAGGTGCCGCCCGGGACGTCGTTCCACTACGAGATGTCCTATTCCAGA
CACGTCCTGTCAGTGTCCATCGACGGCACGCAAACGCTCCTCGACGTGAGCGCCTGGGCCTCGCCGAGCTGCTAC
TTCAAGTCGGGCAACTATAATCAGGCAAGGACGAAGGCCGGGTCCGAGGTGCGGATCGCGGCAGTCAACGTGACA
CATGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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