Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9786
Gene name
LocationContig_738:12563..12892
Strand+
Gene length (bp)329
Transcript length (bp)246
Coding sequence length (bp)246
Protein length (aa) 82

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14737 DUF4470 Domain of unknown function (DUF4470) 2.7E-13 16 74

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9786
MLTPTVANRLSWLYAVGNTPATNLARSVPHGQDADLLALGCGDLRNVLFTAYVNDGLPARKLDITCCDYDERVIG
EPCPAS*
Coding >Hirsu2|9786
ATGCTGACGCCCACCGTCGCCAACCGCCTCTCCTGGCTCTACGCCGTGGGCAACACGCCGGCCACCAACCTCGCC
CGCAGCGTGCCGCACGGCCAGGACGCCGACCTCCTGGCGCTGGGCTGCGGCGACCTGCGCAACGTCCTCTTCACG
GCCTACGTGAATGACGGCCTGCCGGCCAGGAAGCTTGACATCACCTGCTGCGACTATGACGAGCGGGTCATCGGT
GAGCCTTGTCCTGCTTCCTGA
Transcript >Hirsu2|9786
ATGCTGACGCCCACCGTCGCCAACCGCCTCTCCTGGCTCTACGCCGTGGGCAACACGCCGGCCACCAACCTCGCC
CGCAGCGTGCCGCACGGCCAGGACGCCGACCTCCTGGCGCTGGGCTGCGGCGACCTGCGCAACGTCCTCTTCACG
GCCTACGTGAATGACGGCCTGCCGGCCAGGAAGCTTGACATCACCTGCTGCGACTATGACGAGCGGGTCATCGGT
GAGCCTTGTCCTGCTTCCTGA
Gene >Hirsu2|9786
ATGCTGACGCCCACCGTCGCCAACCGCCTCTCCTGGCTCTACGCCGTGGGCAACACGCCGGCCACCAACCTCGCC
CGCAGCGTGCCGCACGGCCAGGACGCCGACCTCCTGGCGCTGGGCTGCGGCGACCTGCGCAACGTCCTCTTCACG
GCCTACGTGAATGACGGCCTGCGTGCGTTTCCCCTCTTGCTCTCTCATGCCCTTGGCCATGGCGGCCTGGCCTGG
CTTCGACTCAACCTAACCCGGGCATGTCAGCGGCCAGGAAGCTTGACATCACCTGCTGCGACTATGACGAGCGGG
TCATCGGTGAGCCTTGTCCTGCTTCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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