Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9751
Gene name
LocationContig_731:6241..6766
Strand-
Gene length (bp)525
Transcript length (bp)525
Coding sequence length (bp)525
Protein length (aa) 175

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2002 0.0958 0.9642 0.0845 0.1262 0.0485 0.2088 0.3505 0.2006 0.0093

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.998669

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup11010
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9751 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9751
MKGLFALCICISCLIGQSVSSPDQHKEVTPTTSVEQSLNSSSAGVAGNTDPVERCKVELLGGSASEPNYARRVCE
NSDIVPGYYKKDFETACGKKSNPAFASACQIVSKELVQRCKAELSEPEASDEYYNYPKSVCEKPGSVPGWYREEK
FDYACGDTVAFASACQSLGYVYGG*
Coding >Hirsu2|9751
ATGAAAGGTCTTTTCGCCCTCTGCATCTGCATATCATGCTTGATCGGCCAAAGCGTTTCTTCGCCAGATCAACAC
AAAGAGGTTACGCCTACTACCTCAGTCGAACAAAGCCTTAACTCCAGCTCCGCGGGTGTAGCTGGTAACACCGAT
CCAGTGGAGCGATGCAAGGTTGAATTACTAGGCGGCTCGGCATCAGAACCGAATTATGCTCGCCGAGTTTGCGAG
AACTCTGATATTGTTCCAGGGTATTACAAGAAAGATTTCGAGACAGCCTGTGGAAAGAAATCGAATCCTGCGTTT
GCCTCGGCCTGCCAAATTGTTAGCAAAGAACTGGTACAGCGATGCAAGGCTGAACTATCGGAGCCCGAGGCAAGC
GATGAATATTATAATTATCCTAAATCGGTCTGCGAGAAGCCTGGAAGCGTCCCAGGGTGGTATAGGGAAGAAAAG
TTCGATTACGCGTGCGGAGATACGGTCGCCTTTGCCTCGGCCTGCCAAAGCCTCGGCTATGTCTATGGAGGATAA
Transcript >Hirsu2|9751
ATGAAAGGTCTTTTCGCCCTCTGCATCTGCATATCATGCTTGATCGGCCAAAGCGTTTCTTCGCCAGATCAACAC
AAAGAGGTTACGCCTACTACCTCAGTCGAACAAAGCCTTAACTCCAGCTCCGCGGGTGTAGCTGGTAACACCGAT
CCAGTGGAGCGATGCAAGGTTGAATTACTAGGCGGCTCGGCATCAGAACCGAATTATGCTCGCCGAGTTTGCGAG
AACTCTGATATTGTTCCAGGGTATTACAAGAAAGATTTCGAGACAGCCTGTGGAAAGAAATCGAATCCTGCGTTT
GCCTCGGCCTGCCAAATTGTTAGCAAAGAACTGGTACAGCGATGCAAGGCTGAACTATCGGAGCCCGAGGCAAGC
GATGAATATTATAATTATCCTAAATCGGTCTGCGAGAAGCCTGGAAGCGTCCCAGGGTGGTATAGGGAAGAAAAG
TTCGATTACGCGTGCGGAGATACGGTCGCCTTTGCCTCGGCCTGCCAAAGCCTCGGCTATGTCTATGGAGGATAA
Gene >Hirsu2|9751
ATGAAAGGTCTTTTCGCCCTCTGCATCTGCATATCATGCTTGATCGGCCAAAGCGTTTCTTCGCCAGATCAACAC
AAAGAGGTTACGCCTACTACCTCAGTCGAACAAAGCCTTAACTCCAGCTCCGCGGGTGTAGCTGGTAACACCGAT
CCAGTGGAGCGATGCAAGGTTGAATTACTAGGCGGCTCGGCATCAGAACCGAATTATGCTCGCCGAGTTTGCGAG
AACTCTGATATTGTTCCAGGGTATTACAAGAAAGATTTCGAGACAGCCTGTGGAAAGAAATCGAATCCTGCGTTT
GCCTCGGCCTGCCAAATTGTTAGCAAAGAACTGGTACAGCGATGCAAGGCTGAACTATCGGAGCCCGAGGCAAGC
GATGAATATTATAATTATCCTAAATCGGTCTGCGAGAAGCCTGGAAGCGTCCCAGGGTGGTATAGGGAAGAAAAG
TTCGATTACGCGTGCGGAGATACGGTCGCCTTTGCCTCGGCCTGCCAAAGCCTCGGCTATGTCTATGGAGGATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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