Protein ID | Hirsu2|9727 |
Gene name | |
Location | Contig_73:296..2304 |
Strand | - |
Gene length (bp) | 2008 |
Transcript length (bp) | 1686 |
Coding sequence length (bp) | 1686 |
Protein length (aa) | 562 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07217 | Het-C | Heterokaryon incompatibility protein Het-C | 5.0E-273 | 14 | 558 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular|Endoplasmic reticulum | Signal peptide | 0.0917 | 0.1133 | 0.7756 | 0.2089 | 0.0455 | 0.0277 | 0.676 | 0.3743 | 0.355 | 0.0208 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 29 | 0.999682 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 35 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 195 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9727 MSSFHQPSRGTWLLVLGVFLVLLPGKAAAFGAGNIPSIAQVEGHNWRHGDIEDMLKSIAFLHGKKWTSMLVKRTY FGNWLRDYSQAVDVGSLKGVNAATIRILVWVLSFMSFGYATEEFEVTEERLGCYRPEEHIDNPKGYADGLDARTF DPRLRGPVDPREIDVDSRTGMKNYIANETGQWATSAGYLRYSFARSIHFGRLYTSGSHGKGKDENLCEALRCLGQ ALHCMEDFSAHSNYCELALRELGFHNVFPHCGTQAEIHVQGRRMYPIVTGTFGAVDFLHSVIGEANDHFTQSEVD EVDVALKNAEAARSGGGDGTRGLFDGSGSTDFISLLSKLPDVGNGFADQARSLKAASEAQERANEAHQPRSRAGE NVNVVPGMSPNFDPVKVSGQIYPILQFRDKIVKAISMGIAKIPGLEKLIEHISETLTAFVLGLLAPFIRPIINQV SKVLKDGSSGVITASSNSQLEPWENAQCSDPTHSMLSKDHFTNILNSCAGRVAATILQYTVPRVLFAWENTNVPV DEVVNDVLRAFHHPVLRNERIDIQRDMFLTVKKTTS* |
Coding | >Hirsu2|9727 ATGTCGTCATTTCATCAGCCATCGCGGGGCACCTGGCTGCTGGTGCTCGGCGTCTTTCTCGTCTTGCTGCCGGGC AAAGCAGCCGCCTTTGGTGCCGGAAACATCCCGTCCATCGCACAGGTCGAGGGCCACAATTGGCGCCATGGAGAC ATCGAGGACATGCTCAAGAGCATTGCCTTTCTGCATGGAAAGAAATGGACATCGATGCTCGTCAAGAGGACCTAC TTCGGCAACTGGCTTCGCGACTATTCCCAGGCTGTCGACGTCGGCAGCTTGAAGGGTGTCAATGCCGCCACAATT CGCATCCTGGTTTGGGTTCTCTCCTTCATGTCTTTCGGCTACGCCACCGAGGAATTCGAGGTCACCGAGGAGCGC CTCGGCTGCTACAGGCCCGAGGAGCACATCGACAACCCCAAGGGCTATGCCGATGGCCTGGACGCCCGTACCTTT GACCCTCGCCTGCGCGGCCCGGTCGACCCTCGGGAGATCGACGTCGACAGCAGGACCGGCATGAAGAACTACATC GCCAACGAGACGGGGCAATGGGCCACCAGCGCCGGCTATCTCCGGTACAGCTTCGCCAGGAGTATCCACTTTGGC CGTCTGTACACCAGCGGATCCCACGGCAAGGGCAAGGACGAGAACCTCTGCGAAGCACTCAGGTGCCTGGGCCAG GCCCTGCATTGCATGGAGGACTTCAGCGCCCATAGCAACTATTGCGAGCTGGCCCTCCGCGAGCTCGGCTTCCAC AACGTGTTCCCGCATTGCGGGACGCAGGCCGAGATCCACGTCCAGGGCAGGAGGATGTATCCGATCGTGACGGGC ACCTTTGGGGCCGTCGACTTTTTGCACTCCGTCATCGGCGAAGCCAACGACCACTTCACCCAGTCCGAGGTCGAC GAGGTCGACGTCGCGCTCAAGAATGCAGAGGCTGCCAGAAGCGGCGGCGGCGACGGCACGAGGGGCCTCTTCGAT GGATCCGGCTCGACCGACTTCATCTCTCTCCTCTCCAAGCTGCCCGACGTGGGCAACGGCTTTGCCGATCAGGCG AGGAGTTTAAAGGCCGCGTCCGAGGCCCAGGAGCGGGCGAACGAAGCCCATCAGCCCCGCAGCCGAGCTGGCGAA AACGTCAACGTCGTCCCCGGCATGAGCCCCAACTTTGACCCGGTCAAGGTGTCCGGCCAGATCTATCCGATCCTG CAGTTCCGCGACAAGATCGTCAAGGCCATCAGCATGGGCATCGCCAAGATCCCAGGCCTGGAGAAGCTGATCGAG CACATCAGCGAGACGCTGACGGCCTTCGTCCTCGGCCTCCTCGCTCCGTTCATCCGGCCCATCATCAACCAGGTG TCGAAGGTGTTGAAGGACGGCTCATCCGGCGTCATCACTGCCAGCTCCAACTCGCAGCTGGAGCCCTGGGAGAAC GCCCAGTGCTCTGATCCGACGCACTCGATGCTGTCCAAGGACCACTTCACCAACATCCTCAACTCGTGCGCCGGT CGCGTTGCCGCGACGATCCTCCAGTACACCGTCCCCCGGGTCCTGTTCGCGTGGGAGAACACCAACGTGCCGGTG GACGAGGTGGTCAACGACGTGCTCCGGGCCTTCCACCACCCCGTCCTCCGCAACGAGAGGATCGACATCCAGCGC GACATGTTCCTGACGGTCAAGAAAACCACATCCTGA |
Transcript | >Hirsu2|9727 ATGTCGTCATTTCATCAGCCATCGCGGGGCACCTGGCTGCTGGTGCTCGGCGTCTTTCTCGTCTTGCTGCCGGGC AAAGCAGCCGCCTTTGGTGCCGGAAACATCCCGTCCATCGCACAGGTCGAGGGCCACAATTGGCGCCATGGAGAC ATCGAGGACATGCTCAAGAGCATTGCCTTTCTGCATGGAAAGAAATGGACATCGATGCTCGTCAAGAGGACCTAC TTCGGCAACTGGCTTCGCGACTATTCCCAGGCTGTCGACGTCGGCAGCTTGAAGGGTGTCAATGCCGCCACAATT CGCATCCTGGTTTGGGTTCTCTCCTTCATGTCTTTCGGCTACGCCACCGAGGAATTCGAGGTCACCGAGGAGCGC CTCGGCTGCTACAGGCCCGAGGAGCACATCGACAACCCCAAGGGCTATGCCGATGGCCTGGACGCCCGTACCTTT GACCCTCGCCTGCGCGGCCCGGTCGACCCTCGGGAGATCGACGTCGACAGCAGGACCGGCATGAAGAACTACATC GCCAACGAGACGGGGCAATGGGCCACCAGCGCCGGCTATCTCCGGTACAGCTTCGCCAGGAGTATCCACTTTGGC CGTCTGTACACCAGCGGATCCCACGGCAAGGGCAAGGACGAGAACCTCTGCGAAGCACTCAGGTGCCTGGGCCAG GCCCTGCATTGCATGGAGGACTTCAGCGCCCATAGCAACTATTGCGAGCTGGCCCTCCGCGAGCTCGGCTTCCAC AACGTGTTCCCGCATTGCGGGACGCAGGCCGAGATCCACGTCCAGGGCAGGAGGATGTATCCGATCGTGACGGGC ACCTTTGGGGCCGTCGACTTTTTGCACTCCGTCATCGGCGAAGCCAACGACCACTTCACCCAGTCCGAGGTCGAC GAGGTCGACGTCGCGCTCAAGAATGCAGAGGCTGCCAGAAGCGGCGGCGGCGACGGCACGAGGGGCCTCTTCGAT GGATCCGGCTCGACCGACTTCATCTCTCTCCTCTCCAAGCTGCCCGACGTGGGCAACGGCTTTGCCGATCAGGCG AGGAGTTTAAAGGCCGCGTCCGAGGCCCAGGAGCGGGCGAACGAAGCCCATCAGCCCCGCAGCCGAGCTGGCGAA AACGTCAACGTCGTCCCCGGCATGAGCCCCAACTTTGACCCGGTCAAGGTGTCCGGCCAGATCTATCCGATCCTG CAGTTCCGCGACAAGATCGTCAAGGCCATCAGCATGGGCATCGCCAAGATCCCAGGCCTGGAGAAGCTGATCGAG CACATCAGCGAGACGCTGACGGCCTTCGTCCTCGGCCTCCTCGCTCCGTTCATCCGGCCCATCATCAACCAGGTG TCGAAGGTGTTGAAGGACGGCTCATCCGGCGTCATCACTGCCAGCTCCAACTCGCAGCTGGAGCCCTGGGAGAAC GCCCAGTGCTCTGATCCGACGCACTCGATGCTGTCCAAGGACCACTTCACCAACATCCTCAACTCGTGCGCCGGT CGCGTTGCCGCGACGATCCTCCAGTACACCGTCCCCCGGGTCCTGTTCGCGTGGGAGAACACCAACGTGCCGGTG GACGAGGTGGTCAACGACGTGCTCCGGGCCTTCCACCACCCCGTCCTCCGCAACGAGAGGATCGACATCCAGCGC GACATGTTCCTGACGGTCAAGAAAACCACATCCTGA |
Gene | >Hirsu2|9727 ATGTCGTCATTTCATCAGCCATCGCGGGGCACCTGGCTGCTGGTGCTCGGCGTCTTTCTCGTCTTGCTGCCGGGC AAAGCAGCCGCCTTTGGTGCCGGAAACATCCCGTCCATCGCACAGGTGCGTGAATGCGATGCACGCCCGCTCGCT GGTGCCATGCAGACTGATGAGCGTGCTAGGTCGAGGGCCACAATTGGCGCCATGGAGGTGAGCCGGAACCCCACG TGCTGCTGGCAAAGGACGGCTCCCTGATGCTCCTGTCCCGGCAGACATCGAGGACATGCTCAAGAGCATTGCCTT TCTGCATGGAAAGAAATGGACATCGATGCTCGTCAAGAGGACCTACTTCGGCAACTGGCTTCGCGACTATTCCCA GGCTGTCGACGTCGGCAGCTTGAAGGGTGTCAATGCCGCCACAATTCGCATCCTGGTCAGTAGCCCCGGCCCTCT GAGGCCCCCAGCCGCCCTCGTCTGATCAGCTTCAAGGTTTGGGTTCTCTCCTTCATGTCTTTCGGCTACGCCACC GAGGAATTCGAGGTCACCGAGGAGCGCCTCGGCTGCTACAGGCCCGAGGAGCACATCGACAACCCCAAGGGCTAT GCCGATGGCCTGGACGCCCGTACCTTTGACCCTCGCCTGCGCGGCCCGGTCGACCCTCGGGAGATCGACGTCGAC AGCAGGACCGGCATGAAGAACTACATCGCCAACGAGACGGGGCAATGGGCCACCAGCGCCGGCTATCTCCGGTAC AGCTTCGCCAGGAGTATCCACTTTGGCCGTCTGTACACCAGCGGATCCCACGGCAAGGGCAAGGACGAGAACCTC TGCGAAGCACTCAGGTGCCTGGGCCAGGCCCTGCATTGCATGGAGGACTTCAGCGCCCATAGCAACTATTGCGAG CTGGCCCTCCGCGAGCTCGGCTTCCACAACGTGTTCCCGCATTGCGGGACGCAGGCCGAGATCCACGTCCAGGGC AGGAGGATGTATCCGATCGTGACGGGCACCTTTGGGGCCGTCGACTTTTTGCACTCCGTCATCGGCGAAGCCAAC GACCACTTCACCCAGTCCGAGGTCGACGAGGTCGACGTCGCGCTCAAGAATGCAGAGGCTGCCAGAAGCGGCGGC GGCGACGGCACGAGGGGCCTCTTCGATGGATCCGGCTCGACCGACTTCATCTCTCTCCTCTCCAAGCTGCCCGAC GTGGGCAACGGCTTTGCCGATCAGGCGAGGAGTTTAAAGGCCGCGTCCGAGGCCCAGGAGCGGGCGAACGAAGCC CATCAGCCCCGCAGCCGAGCTGGCGAAAACGTCAACGTCGTCCCCGGCATGAGCCCCAACTTTGACCCGGTCAAG GTGTCCGGCCAGATCTATCCGATCCTGCAGTTCCGCGACAAGATCGTCAAGGCCATCAGCATGGGCATCGCCAAG ATCCCAGGCCTGGAGAAGCTGATCGAGCACATCAGCGAGACGCTGACGGCCTTCGTCCTCGGCCTCCTCGCTCCG TTCATCCGGCCCATCATCAACCAGGTGTCGAAGGTGTTGAAGGACGGCTCATCCGGCGTCATCACTGCCAGCTCC AACTCGCAGCTGGAGCCCTGGGAGAACGCCCAGTGCTCTGATCCGACGCACTCGATGCTGTCCAAGGACCACTTC ACCAACATCCTCAACTCGTGCGCCGGTCGCGTTGCCGCGACGATCCTCCAGTACACCGTCCCGTGAGTTTCCCCG CCCCCTTCCCCCGTCCCTCGGCAGCCCCGTGCCCAAGGCGACTGACTGACGTCTTGCAGCCGGGTCCTGTTCGCG TGGGAGAACACCAACGTGCCGGTGGACGAGGTGGTCAACGACGTGCTCCGGGCCTTCCACCACCCCGTCCTCCGC AACGAGAGGATCGACATCCAGCGCGACATGTTCCTGACGGTCAAGAAGTGGGCGGACGAGCACCCGCGCCGCCAC CTGCTCGACCAGCTGCTCTCGTCCGACTCGGTCAGGAAGGGCAAGAACCACATCCTGA |