© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9673 |
| Gene name | |
| Location | Contig_719:11395..12816 |
| Strand | - |
| Gene length (bp) | 1421 |
| Transcript length (bp) | 1359 |
| Coding sequence length (bp) | 1359 |
| Protein length (aa) | 453 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13813 | MBOAT_2 | Membrane bound O-acyl transferase family | 6.5E-16 | 283 | 368 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 45 | 64 | 19 |
| 3 | 68 | 90 | 22 |
| 4 | 334 | 355 | 21 |
| 5 | 365 | 382 | 17 |
| 6 | 395 | 417 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9673 MPARLAAGRLEGLSVALLVAGSLLVPVVWLAVPHARRPWLYRARWPVVALVVALQLHLFRHASIENPGAAYVVGV MLPCAALTTANLVLWRRPQAEAARAVSRPTPTGRVWVWQTFPADESFAARLCWASDLFVSIRGGGWNWAISSIPR PRAPAHVKSGGRIDLSSIPLETACGCKRPLTARGFLRERLTKILATYLLLDLVTVWHQKDPYYLRGPDYISSQQL PEHLRHVPAWCLLLYRETLSLAGIVSAFTLYSSLTDLVSFWLLKHLAPARVGVWQHASLFGSFSCVLDRGLSGWW GGWWHQILRIAFLAPTRHLSRQGYLANGSRRFKAVALLTAFALSGLVHAAGSIMTAAPTKPWRPLVFFLAQAGGI IVQRGLSRAAKTAWPRPPRALARAANLVFTAAFMYATGPYILDDLASTGIFGLETLPVSPMRALGFGRPGDHWWR VK* |
| Coding | >Hirsu2|9673 ATGCCCGCTCGCCTCGCCGCCGGCCGACTGGAGGGACTGTCGGTGGCGCTGCTCGTCGCCGGCTCGCTGCTCGTG CCCGTCGTCTGGCTCGCCGTCCCCCACGCGCGGCGGCCGTGGCTGTACCGGGCGCGGTGGCCGGTCGTCGCGCTC GTCGTCGCCCTGCAACTCCACCTCTTCCGCCACGCGTCCATCGAGAACCCGGGCGCGGCCTACGTCGTCGGCGTG ATGCTGCCCTGCGCCGCCCTCACGACCGCCAACCTCGTCCTCTGGCGCAGGCCGCAGGCCGAGGCCGCCCGGGCG GTGTCGAGGCCGACGCCGACCGGCCGCGTCTGGGTCTGGCAGACGTTCCCGGCGGACGAGTCGTTTGCCGCCCGT CTTTGCTGGGCTTCGGACCTGTTCGTCAGTATCCGGGGCGGCGGGTGGAACTGGGCCATATCTTCGATTCCACGG CCTCGCGCCCCTGCCCACGTCAAGTCTGGCGGGCGCATTGACCTGAGCAGCATTCCGCTGGAGACAGCTTGCGGC TGCAAGAGGCCCCTCACGGCGCGAGGATTCCTGCGCGAGCGCCTGACCAAGATTCTGGCGACGTACCTCCTCCTG GACCTGGTGACCGTCTGGCACCAAAAGGACCCCTACTACCTTCGGGGGCCGGACTACATTTCCTCTCAGCAGCTC CCAGAGCATCTGCGGCACGTCCCCGCCTGGTGCCTACTCCTTTACCGCGAGACGTTGAGTCTGGCGGGGATCGTG AGCGCCTTCACGCTCTACTCTAGTCTCACCGATCTCGTCTCCTTCTGGCTCCTCAAGCACCTCGCCCCCGCGCGC GTAGGCGTCTGGCAGCACGCCTCCCTTTTCGGCTCCTTCTCCTGCGTCCTCGACCGAGGCCTTTCTGGCTGGTGG GGGGGCTGGTGGCACCAGATCTTGCGCATCGCGTTCCTCGCCCCGACGCGCCACCTGTCCCGGCAGGGCTACCTT GCGAACGGCTCCCGGCGCTTCAAAGCGGTGGCCCTGCTCACGGCCTTCGCCCTGTCCGGGCTGGTCCACGCGGCG GGGAGCATCATGACGGCGGCTCCGACAAAGCCCTGGCGGCCGCTCGTCTTCTTCCTCGCCCAGGCCGGCGGCATC ATCGTGCAGCGAGGCCTCTCCAGGGCGGCCAAGACGGCCTGGCCCCGCCCGCCGAGAGCCCTGGCCAGGGCAGCG AACCTGGTCTTCACGGCGGCCTTTATGTATGCCACTGGGCCCTACATCCTCGACGACCTCGCATCGACTGGAATC TTTGGGCTGGAGACGCTTCCCGTCTCGCCCATGCGCGCGCTGGGCTTTGGCCGTCCCGGGGACCACTGGTGGCGG GTGAAGTAG |
| Transcript | >Hirsu2|9673 ATGCCCGCTCGCCTCGCCGCCGGCCGACTGGAGGGACTGTCGGTGGCGCTGCTCGTCGCCGGCTCGCTGCTCGTG CCCGTCGTCTGGCTCGCCGTCCCCCACGCGCGGCGGCCGTGGCTGTACCGGGCGCGGTGGCCGGTCGTCGCGCTC GTCGTCGCCCTGCAACTCCACCTCTTCCGCCACGCGTCCATCGAGAACCCGGGCGCGGCCTACGTCGTCGGCGTG ATGCTGCCCTGCGCCGCCCTCACGACCGCCAACCTCGTCCTCTGGCGCAGGCCGCAGGCCGAGGCCGCCCGGGCG GTGTCGAGGCCGACGCCGACCGGCCGCGTCTGGGTCTGGCAGACGTTCCCGGCGGACGAGTCGTTTGCCGCCCGT CTTTGCTGGGCTTCGGACCTGTTCGTCAGTATCCGGGGCGGCGGGTGGAACTGGGCCATATCTTCGATTCCACGG CCTCGCGCCCCTGCCCACGTCAAGTCTGGCGGGCGCATTGACCTGAGCAGCATTCCGCTGGAGACAGCTTGCGGC TGCAAGAGGCCCCTCACGGCGCGAGGATTCCTGCGCGAGCGCCTGACCAAGATTCTGGCGACGTACCTCCTCCTG GACCTGGTGACCGTCTGGCACCAAAAGGACCCCTACTACCTTCGGGGGCCGGACTACATTTCCTCTCAGCAGCTC CCAGAGCATCTGCGGCACGTCCCCGCCTGGTGCCTACTCCTTTACCGCGAGACGTTGAGTCTGGCGGGGATCGTG AGCGCCTTCACGCTCTACTCTAGTCTCACCGATCTCGTCTCCTTCTGGCTCCTCAAGCACCTCGCCCCCGCGCGC GTAGGCGTCTGGCAGCACGCCTCCCTTTTCGGCTCCTTCTCCTGCGTCCTCGACCGAGGCCTTTCTGGCTGGTGG GGGGGCTGGTGGCACCAGATCTTGCGCATCGCGTTCCTCGCCCCGACGCGCCACCTGTCCCGGCAGGGCTACCTT GCGAACGGCTCCCGGCGCTTCAAAGCGGTGGCCCTGCTCACGGCCTTCGCCCTGTCCGGGCTGGTCCACGCGGCG GGGAGCATCATGACGGCGGCTCCGACAAAGCCCTGGCGGCCGCTCGTCTTCTTCCTCGCCCAGGCCGGCGGCATC ATCGTGCAGCGAGGCCTCTCCAGGGCGGCCAAGACGGCCTGGCCCCGCCCGCCGAGAGCCCTGGCCAGGGCAGCG AACCTGGTCTTCACGGCGGCCTTTATGTATGCCACTGGGCCCTACATCCTCGACGACCTCGCATCGACTGGAATC TTTGGGCTGGAGACGCTTCCCGTCTCGCCCATGCGCGCGCTGGGCTTTGGCCGTCCCGGGGACCACTGGTGGCGG GTGAAGTAG |
| Gene | >Hirsu2|9673 ATGCCCGCTCGCCTCGCCGCCGGCCGACTGGAGGGACTGTCGGTGGCGCTGCTCGTCGCCGGCTCGCTGCTCGTG CCCGTCGTCTGGCTCGCCGTCCCCCACGCGCGGCGGCCGTGGCTGTACCGGGCGCGGTGGCCGGTCGTCGCGCTC GTCGTCGCCCTGCAACTCCACCTCTTCCGCCACGCGTCCATCGAGAACCCGGGCGCGGCCTACGTCGTCGGCGTG ATGCTGCCCTGCGCCGCCCTCACGACCGCCAACCTCGTCCTCTGGCGCAGGCCGCAGGCCGAGGCCGCCCGGGCG GTGTCGAGGCCGACGCCGACCGGCCGCGTCTGGGTCTGGCAGACGTTCCCGGCGGACGAGTCGTTTGCCGCCCGT CTTTGCTGGGCTTCGGACCTGTTCGTCAGTATCCGGGGCGGCGGTGAGGCCCAAGCCCTCTTCGCCACTGGCCTG TTTTCTTTTTTCTGACCGTCCGGCTGATAGGGTGGAACTGGGCCATATCTTCGATTCCACGGCCTCGCGCCCCTG CCCACGTCAAGTCTGGCGGGCGCATTGACCTGAGCAGCATTCCGCTGGAGACAGCTTGCGGCTGCAAGAGGCCCC TCACGGCGCGAGGATTCCTGCGCGAGCGCCTGACCAAGATTCTGGCGACGTACCTCCTCCTGGACCTGGTGACCG TCTGGCACCAAAAGGACCCCTACTACCTTCGGGGGCCGGACTACATTTCCTCTCAGCAGCTCCCAGAGCATCTGC GGCACGTCCCCGCCTGGTGCCTACTCCTTTACCGCGAGACGTTGAGTCTGGCGGGGATCGTGAGCGCCTTCACGC TCTACTCTAGTCTCACCGATCTCGTCTCCTTCTGGCTCCTCAAGCACCTCGCCCCCGCGCGCGTAGGCGTCTGGC AGCACGCCTCCCTTTTCGGCTCCTTCTCCTGCGTCCTCGACCGAGGCCTTTCTGGCTGGTGGGGGGGCTGGTGGC ACCAGATCTTGCGCATCGCGTTCCTCGCCCCGACGCGCCACCTGTCCCGGCAGGGCTACCTTGCGAACGGCTCCC GGCGCTTCAAAGCGGTGGCCCTGCTCACGGCCTTCGCCCTGTCCGGGCTGGTCCACGCGGCGGGGAGCATCATGA CGGCGGCTCCGACAAAGCCCTGGCGGCCGCTCGTCTTCTTCCTCGCCCAGGCCGGCGGCATCATCGTGCAGCGAG GCCTCTCCAGGGCGGCCAAGACGGCCTGGCCCCGCCCGCCGAGAGCCCTGGCCAGGGCAGCGAACCTGGTCTTCA CGGCGGCCTTTATGTATGCCACTGGGCCCTACATCCTCGACGACCTCGCATCGACTGGAATCTTTGGGCTGGAGA CGCTTCCCGTCTCGCCCATGCGCGCGCTGGGCTTTGGCCGTCCCGGGGACCACTGGTGGCGGGTGAAGTAG |