Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9666
Gene name
LocationContig_718:8594..9715
Strand+
Gene length (bp)1121
Transcript length (bp)1044
Coding sequence length (bp)1044
Protein length (aa) 348

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08213 COX24_C Mitochondrial mRNA-processing protein COX24, C-terminal 2.0E-10 314 345

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.1071 0.1405 0.0448 0.0756 0.9491 0.0097 0.0324 0.0124 0.0307 0.0084

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4608
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2460
Ophiocordyceps australis map64 (Brazil) OphauB2|4463
Ophiocordyceps camponoti-floridani Ophcf2|03344
Ophiocordyceps camponoti-rufipedis Ophun1|6807
Ophiocordyceps kimflemingae Ophio5|62
Ophiocordyceps subramaniannii Hirsu2|9666 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9666
MLPSSVRRVVAAAPQAAGLVSSLGPSAPKPTSAPAVATTPILVNRHQRRYSSSKPSRPPSDPSDISAGQSVAASS
ASTRGDGKAGGDKRKRKNKDATDRSASFKKLPSVPTTHHMSQEALGLSSFFSLHRPISITQTMPRTVTEEHFASI
FAPQSKAKKVSETMSTLSDTIDQLDGSMAQITIESQSAEQGAGDGMHRVDVRNPDGSESGISLQVDAMSGDFLPY
RPPPLPQPQSDAAAAAAAAESEAIEQAPHHRVYKAMFTIEESTEPDGQIRILAHSPRIIRAQQPRTFLERMARRQ
LDFEEAQARRDMQAISVKRQRKLKMKKKKYKKLMKRTRNLRRKLDRT*
Coding >Hirsu2|9666
ATGCTACCCTCGTCGGTCCGGCGTGTCGTCGCGGCCGCCCCCCAGGCCGCCGGCTTGGTCTCTTCCCTGGGCCCC
TCGGCACCCAAGCCGACTTCCGCCCCTGCCGTCGCCACGACTCCCATCCTCGTCAACCGCCACCAGCGGAGATAC
TCATCCTCCAAGCCCTCAAGACCGCCCAGCGATCCGAGCGACATTTCCGCTGGCCAATCCGTTGCCGCCTCGTCG
GCCTCGACGCGTGGCGATGGCAAGGCAGGCGGCGACAAGAGGAAGCGGAAAAACAAGGACGCCACCGACAGAAGC
GCTTCCTTCAAGAAGCTGCCCAGCGTGCCCACCACCCACCACATGTCGCAAGAAGCTCTCGGCCTCTCCAGCTTC
TTCTCTCTCCACCGGCCCATCTCCATCACGCAGACGATGCCGAGAACCGTTACCGAGGAACATTTCGCCTCCATC
TTCGCCCCGCAGAGTAAAGCCAAAAAAGTGTCCGAAACCATGTCGACCTTGTCCGACACCATCGACCAGCTCGAC
GGCTCCATGGCCCAGATCACGATAGAGAGCCAGAGCGCGGAGCAGGGCGCGGGTGACGGCATGCATAGGGTCGAC
GTCCGCAACCCGGACGGCAGCGAGTCGGGCATCTCTCTCCAAGTCGACGCCATGTCCGGTGACTTCCTGCCCTAC
CGGCCCCCGCCCCTTCCACAGCCGCAGTCGGACGCCGCCGCCGCCGCCGCCGCCGCCGAATCCGAGGCCATCGAA
CAAGCGCCGCACCACCGTGTCTACAAGGCCATGTTCACCATCGAGGAGTCGACGGAACCGGACGGCCAGATCCGA
ATCCTCGCTCACAGCCCCCGCATCATCCGCGCCCAACAACCTCGCACTTTTCTCGAACGGATGGCACGCCGACAG
CTCGACTTCGAAGAGGCCCAGGCTCGTCGCGATATGCAGGCCATCAGCGTCAAGAGGCAAAGGAAACTCAAGATG
AAGAAGAAGAAGTACAAGAAGCTGATGAAGCGCACGCGCAATCTGCGTCGGAAGCTGGACCGGACGTGA
Transcript >Hirsu2|9666
ATGCTACCCTCGTCGGTCCGGCGTGTCGTCGCGGCCGCCCCCCAGGCCGCCGGCTTGGTCTCTTCCCTGGGCCCC
TCGGCACCCAAGCCGACTTCCGCCCCTGCCGTCGCCACGACTCCCATCCTCGTCAACCGCCACCAGCGGAGATAC
TCATCCTCCAAGCCCTCAAGACCGCCCAGCGATCCGAGCGACATTTCCGCTGGCCAATCCGTTGCCGCCTCGTCG
GCCTCGACGCGTGGCGATGGCAAGGCAGGCGGCGACAAGAGGAAGCGGAAAAACAAGGACGCCACCGACAGAAGC
GCTTCCTTCAAGAAGCTGCCCAGCGTGCCCACCACCCACCACATGTCGCAAGAAGCTCTCGGCCTCTCCAGCTTC
TTCTCTCTCCACCGGCCCATCTCCATCACGCAGACGATGCCGAGAACCGTTACCGAGGAACATTTCGCCTCCATC
TTCGCCCCGCAGAGTAAAGCCAAAAAAGTGTCCGAAACCATGTCGACCTTGTCCGACACCATCGACCAGCTCGAC
GGCTCCATGGCCCAGATCACGATAGAGAGCCAGAGCGCGGAGCAGGGCGCGGGTGACGGCATGCATAGGGTCGAC
GTCCGCAACCCGGACGGCAGCGAGTCGGGCATCTCTCTCCAAGTCGACGCCATGTCCGGTGACTTCCTGCCCTAC
CGGCCCCCGCCCCTTCCACAGCCGCAGTCGGACGCCGCCGCCGCCGCCGCCGCCGCCGAATCCGAGGCCATCGAA
CAAGCGCCGCACCACCGTGTCTACAAGGCCATGTTCACCATCGAGGAGTCGACGGAACCGGACGGCCAGATCCGA
ATCCTCGCTCACAGCCCCCGCATCATCCGCGCCCAACAACCTCGCACTTTTCTCGAACGGATGGCACGCCGACAG
CTCGACTTCGAAGAGGCCCAGGCTCGTCGCGATATGCAGGCCATCAGCGTCAAGAGGCAAAGGAAACTCAAGATG
AAGAAGAAGAAGTACAAGAAGCTGATGAAGCGCACGCGCAATCTGCGTCGGAAGCTGGACCGGACGTGA
Gene >Hirsu2|9666
ATGCTACCCTCGTCGGTCCGGCGTGTCGTCGCGGCCGCCCCCCAGGCCGCCGGCTTGGTCTCTTCCCTGGGCCCC
TCGGCACCCAAGCCGACTTCCGCCCCTGCCGTCGCCACGACTCCCATCCTCGTCAACCGCCACCAGCGGAGATAC
TCATCCTCCAAGCCCTCAAGACCGCCCAGCGATCCGAGCGACATTTCCGCTGGCCAATCCGTTGCCGCCTCGTCG
GCCTCGACGCGTGGCGATGGCAAGGCAGGCGGCGACAAGAGGAAGCGGAAAAACAAGGACGCCACCGACAGAAGC
GCTTCCTTCAAGAAGCTGCCCAGCGTGCCCACCACCCACCACATGTCGCAAGAAGGTGAGCCGTGCGTCTCGCGG
GGGGACCTTGTTGCCTTTACGTCGATGGCCATAGAACCAGTCTGACCGCCGTCGCAGCTCTCGGCCTCTCCAGCT
TCTTCTCTCTCCACCGGCCCATCTCCATCACGCAGACGATGCCGAGAACCGTTACCGAGGAACATTTCGCCTCCA
TCTTCGCCCCGCAGAGTAAAGCCAAAAAAGTGTCCGAAACCATGTCGACCTTGTCCGACACCATCGACCAGCTCG
ACGGCTCCATGGCCCAGATCACGATAGAGAGCCAGAGCGCGGAGCAGGGCGCGGGTGACGGCATGCATAGGGTCG
ACGTCCGCAACCCGGACGGCAGCGAGTCGGGCATCTCTCTCCAAGTCGACGCCATGTCCGGTGACTTCCTGCCCT
ACCGGCCCCCGCCCCTTCCACAGCCGCAGTCGGACGCCGCCGCCGCCGCCGCCGCCGCCGAATCCGAGGCCATCG
AACAAGCGCCGCACCACCGTGTCTACAAGGCCATGTTCACCATCGAGGAGTCGACGGAACCGGACGGCCAGATCC
GAATCCTCGCTCACAGCCCCCGCATCATCCGCGCCCAACAACCTCGCACTTTTCTCGAACGGATGGCACGCCGAC
AGCTCGACTTCGAAGAGGCCCAGGCTCGTCGCGATATGCAGGCCATCAGCGTCAAGAGGCAAAGGAAACTCAAGA
TGAAGAAGAAGAAGTACAAGAAGCTGATGAAGCGCACGCGCAATCTGCGTCGGAAGCTGGACCGGACGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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