© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9647 |
| Gene name | |
| Location | Contig_714:1998..2792 |
| Strand | + |
| Gene length (bp) | 794 |
| Transcript length (bp) | 630 |
| Coding sequence length (bp) | 630 |
| Protein length (aa) | 210 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.1086 | 0.0767 | 0.8722 | 0.4215 | 0.0501 | 0.0086 | 0.3439 | 0.1243 | 0.156 | 0.0017 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 25 | 0.979958 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4595 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9647 MFARKMAVVSTAFLAVGCFVSGVLSVAPYSNDASTETAAPQELGSMTIDGSLVYSVNMCTIVHSTNCQVSMSTGG AAPPAGPAEGSSGAAAPTVPGEAAPTVPGEGEYGSNVIPATLAYSAVDAASTGPEPASTELEASVPTSMARGNAS AYLSASEEAAATPTRSSHYLAATSTSSPTPPTSTGASNTVSVVRGVAIGAGAMAVALLF* |
| Coding | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC GGAGCCATGGCCGTCGCCTTGCTCTTCTGA |
| Transcript | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC GGAGCCATGGCCGTCGCCTTGCTCTTCTGA |
| Gene | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTGTACGTCGTTTCTTCTCATTTCCCCTTCCGAGAAAGACCGCAGCAGACCTGACTGACCTCTG TTCATCCTTCGCAGCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGG TAAGCTTCTCTCTTGTCTCTCTCTTCGCCCTCTGCTCGGGCTTTCCCCTCCACCAAGGACACTCCCGGCTGACCA GACATCCACCAGGCTCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCA TGTCCACCGGCGGCGCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCG GCGAGGCCGCCCCGACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTG CCGTCGACGCGGCCAGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCC GCGGCAACGCCTCGGCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGG CTGCCACCAGCACCAGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCG TCGCCATCGGTGCCGGAGCCATGGCCGTCGCCTTGCTCTTCTGA |