Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9647
Gene name
LocationContig_714:1998..2792
Strand+
Gene length (bp)794
Transcript length (bp)630
Coding sequence length (bp)630
Protein length (aa) 210

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9647
MFARKMAVVSTAFLAVGCFVSGVLSVAPYSNDASTETAAPQELGSMTIDGSLVYSVNMCTIVHSTNCQVSMSTGG
AAPPAGPAEGSSGAAAPTVPGEAAPTVPGEGEYGSNVIPATLAYSAVDAASTGPEPASTELEASVPTSMARGNAS
AYLSASEEAAATPTRSSHYLAATSTSSPTPPTSTGASNTVSVVRGVAIGAGAMAVALLF*
Coding >Hirsu2|9647
ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC
GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC
TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC
GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG
ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC
AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG
GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC
AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC
GGAGCCATGGCCGTCGCCTTGCTCTTCTGA
Transcript >Hirsu2|9647
ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC
GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC
TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC
GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG
ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC
AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG
GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC
AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC
GGAGCCATGGCCGTCGCCTTGCTCTTCTGA
Gene >Hirsu2|9647
ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC
GTCGCTCCTTATTGTACGTCGTTTCTTCTCATTTCCCCTTCCGAGAAAGACCGCAGCAGACCTGACTGACCTCTG
TTCATCCTTCGCAGCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGG
TAAGCTTCTCTCTTGTCTCTCTCTTCGCCCTCTGCTCGGGCTTTCCCCTCCACCAAGGACACTCCCGGCTGACCA
GACATCCACCAGGCTCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCA
TGTCCACCGGCGGCGCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCG
GCGAGGCCGCCCCGACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTG
CCGTCGACGCGGCCAGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCC
GCGGCAACGCCTCGGCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGG
CTGCCACCAGCACCAGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCG
TCGCCATCGGTGCCGGAGCCATGGCCGTCGCCTTGCTCTTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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