Protein ID | Hirsu2|9647 |
Gene name | |
Location | Contig_714:1998..2792 |
Strand | + |
Gene length (bp) | 794 |
Transcript length (bp) | 630 |
Coding sequence length (bp) | 630 |
Protein length (aa) | 210 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.1086 | 0.0767 | 0.8722 | 0.4215 | 0.0501 | 0.0086 | 0.3439 | 0.1243 | 0.156 | 0.0017 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.979958 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4595 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9647 MFARKMAVVSTAFLAVGCFVSGVLSVAPYSNDASTETAAPQELGSMTIDGSLVYSVNMCTIVHSTNCQVSMSTGG AAPPAGPAEGSSGAAAPTVPGEAAPTVPGEGEYGSNVIPATLAYSAVDAASTGPEPASTELEASVPTSMARGNAS AYLSASEEAAATPTRSSHYLAATSTSSPTPPTSTGASNTVSVVRGVAIGAGAMAVALLF* |
Coding | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC GGAGCCATGGCCGTCGCCTTGCTCTTCTGA |
Transcript | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGGC TCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCATGTCCACCGGCGGC GCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCGGCGAGGCCGCCCCG ACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTGCCGTCGACGCGGCC AGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCCGCGGCAACGCCTCG GCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGGCTGCCACCAGCACC AGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCGTCGCCATCGGTGCC GGAGCCATGGCCGTCGCCTTGCTCTTCTGA |
Gene | >Hirsu2|9647 ATGTTCGCCCGCAAGATGGCCGTCGTTTCCACCGCCTTCCTTGCCGTCGGCTGCTTCGTCTCCGGCGTCCTGTCC GTCGCTCCTTATTGTACGTCGTTTCTTCTCATTTCCCCTTCCGAGAAAGACCGCAGCAGACCTGACTGACCTCTG TTCATCCTTCGCAGCGAATGACGCGTCCACCGAGACTGCTGCTCCCCAGGAGCTTGGTTCCATGACCATCGATGG TAAGCTTCTCTCTTGTCTCTCTCTTCGCCCTCTGCTCGGGCTTTCCCCTCCACCAAGGACACTCCCGGCTGACCA GACATCCACCAGGCTCTCTCGTCTACTCGGTCAACATGTGCACCATCGTGCACTCGACCAACTGCCAGGTCTCCA TGTCCACCGGCGGCGCGGCTCCTCCCGCCGGCCCGGCTGAGGGAAGCTCCGGCGCGGCCGCCCCGACCGTCCCCG GCGAGGCCGCCCCGACCGTCCCCGGCGAGGGCGAGTACGGCTCCAACGTGATCCCGGCCACGCTCGCCTACTCTG CCGTCGACGCGGCCAGCACCGGGCCCGAGCCGGCCAGCACCGAGCTCGAGGCCAGCGTCCCGACCTCGATGGCCC GCGGCAACGCCTCGGCCTACCTCTCCGCCAGCGAGGAGGCGGCCGCGACGCCCACCCGCAGCAGCCACTACCTGG CTGCCACCAGCACCAGCTCGCCCACGCCGCCCACCTCGACGGGCGCTAGCAACACCGTCAGCGTCGTGCGCGGCG TCGCCATCGGTGCCGGAGCCATGGCCGTCGCCTTGCTCTTCTGA |