Protein ID | Hirsu2|963 |
Gene name | |
Location | Contig_12:58947..59523 |
Strand | + |
Gene length (bp) | 576 |
Transcript length (bp) | 576 |
Coding sequence length (bp) | 576 |
Protein length (aa) | 192 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.0766 | 0.0574 | 0.8642 | 0.3231 | 0.0573 | 0.0044 | 0.1894 | 0.0432 | 0.1298 | 0.0015 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 23 | 0.999291 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 4587 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|963 MPSSSALAAVVALGLAAAPPAAAIDYSAAMPILERRADIVPRQTDGPSLGGLSVSGPCISVASSVFGSIPTPPPE IQPELVKAAGSDLCKFTPPASLTNQFSSYSSQLVSWISENESKLSPCSGALSQISAVAGSSCSSIPGAAATASGG SNSGNAANGEARSGSAAAPRQSGIAVAAAAVAAAGFVVMAL* |
Coding | >Hirsu2|963 ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA |
Transcript | >Hirsu2|963 ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA |
Gene | >Hirsu2|963 ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA |