Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|963
Gene name
LocationContig_12:58947..59523
Strand+
Gene length (bp)576
Transcript length (bp)576
Coding sequence length (bp)576
Protein length (aa) 192

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0766 0.0574 0.8642 0.3231 0.0573 0.0044 0.1894 0.0432 0.1298 0.0015

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.999291

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4587
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3198
Ophiocordyceps australis map64 (Brazil) OphauB2|546
Ophiocordyceps camponoti-floridani Ophcf2|06296
Ophiocordyceps camponoti-rufipedis Ophun1|2620
Ophiocordyceps kimflemingae Ophio5|7307
Ophiocordyceps subramaniannii Hirsu2|963 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|963
MPSSSALAAVVALGLAAAPPAAAIDYSAAMPILERRADIVPRQTDGPSLGGLSVSGPCISVASSVFGSIPTPPPE
IQPELVKAAGSDLCKFTPPASLTNQFSSYSSQLVSWISENESKLSPCSGALSQISAVAGSSCSSIPGAAATASGG
SNSGNAANGEARSGSAAAPRQSGIAVAAAAVAAAGFVVMAL*
Coding >Hirsu2|963
ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC
TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC
GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG
ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG
TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC
CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG
TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC
GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA
Transcript >Hirsu2|963
ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC
TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC
GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG
ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG
TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC
CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG
TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC
GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA
Gene >Hirsu2|963
ATGCCGTCGTCGTCCGCCCTCGCCGCCGTCGTGGCCCTCGGCCTCGCCGCCGCGCCGCCCGCCGCCGCCATCGAC
TACAGCGCCGCCATGCCCATCCTCGAGCGCCGCGCCGACATCGTCCCGCGCCAGACCGACGGCCCCTCCCTCGGC
GGCCTCTCCGTCTCGGGCCCCTGCATCAGCGTCGCCTCCTCCGTCTTCGGCTCCATCCCGACGCCGCCGCCCGAG
ATCCAGCCGGAGTTGGTCAAGGCGGCCGGGTCCGACCTGTGCAAGTTCACCCCGCCGGCCAGCCTGACCAACCAG
TTCTCCTCCTACAGCTCCCAGCTCGTCTCCTGGATCTCGGAGAACGAGAGCAAGCTCAGCCCCTGCTCCGGCGCC
CTGTCCCAGATCAGCGCCGTCGCCGGCAGCTCCTGCAGCAGCATCCCCGGCGCTGCCGCCACCGCCTCCGGCGGG
TCCAACTCCGGCAACGCCGCCAACGGCGAAGCCAGGTCCGGCAGCGCCGCCGCGCCGCGCCAGAGCGGCATCGCC
GTCGCCGCCGCCGCCGTCGCCGCTGCCGGCTTTGTCGTCATGGCCCTGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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