Protein ID | Hirsu2|9620 |
Gene name | |
Location | Contig_71:25114..25846 |
Strand | + |
Gene length (bp) | 732 |
Transcript length (bp) | 732 |
Coding sequence length (bp) | 732 |
Protein length (aa) | 244 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13649 | Methyltransf_25 | Methyltransferase domain | 4.6E-12 | 20 | 123 |
PF08241 | Methyltransf_11 | Methyltransferase domain | 1.7E-08 | 21 | 126 |
PF13847 | Methyltransf_31 | Methyltransferase domain | 2.1E-07 | 16 | 131 |
PF13489 | Methyltransf_23 | Methyltransferase domain | 1.3E-06 | 14 | 162 |
PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 2.1E-04 | 17 | 128 |
GO Term | Description | Terminal node |
---|---|---|
GO:0008168 | methyltransferase activity | Yes |
GO:0016740 | transferase activity | No |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016741 | transferase activity, transferring one-carbon groups | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.7047 | 0.7085 | 0.1803 | 0.0238 | 0.073 | 0.0387 | 0.0348 | 0.0762 | 0.0972 | 0.0029 |
Orthofinder run ID | 4 |
Orthogroup | 1039 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9620 MELRNVQMVLRNLLSPNSAVLEFACGTGFYTTHLLDWGAKSLTAMDNSPTMLGSASARLLNHGLSGCARLVQGDG TTPQSLAPDGKLECFDLAFGAWFLNYARSKAELTAMFKTISLNLKPGGVFVGIVPHPTDDLKLRAAAYRNPRFRN TFPRNEYTEELESGDGWGLQVSLDDDGVRFMTWHMKQRVYEEAARLGGMKGRLEWRREQLFKEEWGERFGLSREE LQAREENPHHGILVAYKD* |
Coding | >Hirsu2|9620 ATGGAGTTGCGCAACGTTCAAATGGTCCTGAGGAATCTACTTTCTCCTAACTCCGCCGTCCTCGAGTTCGCCTGC GGGACGGGCTTCTACACCACGCACCTTCTAGACTGGGGCGCCAAGTCTCTCACAGCCATGGATAACTCCCCTACC ATGCTCGGGAGTGCCTCGGCTCGACTGCTGAATCATGGGCTTTCTGGCTGTGCACGACTGGTCCAGGGCGACGGC ACCACACCGCAGTCGTTGGCCCCCGATGGAAAGCTGGAATGTTTCGACCTCGCCTTTGGCGCCTGGTTCCTCAAC TACGCGCGGAGCAAAGCCGAGCTGACAGCCATGTTCAAGACAATCTCGCTGAACCTCAAACCGGGCGGCGTCTTC GTCGGCATAGTGCCGCATCCGACAGACGATCTGAAGCTCCGCGCGGCGGCGTACCGTAACCCGCGCTTCAGGAAT ACCTTTCCGCGGAACGAGTATACCGAAGAGCTCGAGTCGGGTGACGGATGGGGCCTGCAGGTCTCTCTGGACGAC GACGGCGTGCGCTTCATGACGTGGCACATGAAGCAGCGCGTCTACGAGGAGGCGGCCCGGCTCGGGGGCATGAAA GGGAGGCTGGAGTGGAGGCGCGAGCAGTTGTTCAAGGAGGAATGGGGGGAGAGATTCGGTCTAAGTCGCGAAGAG CTGCAGGCGCGGGAAGAAAACCCCCATCATGGCATACTCGTTGCATATAAAGATTAG |
Transcript | >Hirsu2|9620 ATGGAGTTGCGCAACGTTCAAATGGTCCTGAGGAATCTACTTTCTCCTAACTCCGCCGTCCTCGAGTTCGCCTGC GGGACGGGCTTCTACACCACGCACCTTCTAGACTGGGGCGCCAAGTCTCTCACAGCCATGGATAACTCCCCTACC ATGCTCGGGAGTGCCTCGGCTCGACTGCTGAATCATGGGCTTTCTGGCTGTGCACGACTGGTCCAGGGCGACGGC ACCACACCGCAGTCGTTGGCCCCCGATGGAAAGCTGGAATGTTTCGACCTCGCCTTTGGCGCCTGGTTCCTCAAC TACGCGCGGAGCAAAGCCGAGCTGACAGCCATGTTCAAGACAATCTCGCTGAACCTCAAACCGGGCGGCGTCTTC GTCGGCATAGTGCCGCATCCGACAGACGATCTGAAGCTCCGCGCGGCGGCGTACCGTAACCCGCGCTTCAGGAAT ACCTTTCCGCGGAACGAGTATACCGAAGAGCTCGAGTCGGGTGACGGATGGGGCCTGCAGGTCTCTCTGGACGAC GACGGCGTGCGCTTCATGACGTGGCACATGAAGCAGCGCGTCTACGAGGAGGCGGCCCGGCTCGGGGGCATGAAA GGGAGGCTGGAGTGGAGGCGCGAGCAGTTGTTCAAGGAGGAATGGGGGGAGAGATTCGGTCTAAGTCGCGAAGAG CTGCAGGCGCGGGAAGAAAACCCCCATCATGGCATACTCGTTGCATATAAAGATTAG |
Gene | >Hirsu2|9620 ATGGAGTTGCGCAACGTTCAAATGGTCCTGAGGAATCTACTTTCTCCTAACTCCGCCGTCCTCGAGTTCGCCTGC GGGACGGGCTTCTACACCACGCACCTTCTAGACTGGGGCGCCAAGTCTCTCACAGCCATGGATAACTCCCCTACC ATGCTCGGGAGTGCCTCGGCTCGACTGCTGAATCATGGGCTTTCTGGCTGTGCACGACTGGTCCAGGGCGACGGC ACCACACCGCAGTCGTTGGCCCCCGATGGAAAGCTGGAATGTTTCGACCTCGCCTTTGGCGCCTGGTTCCTCAAC TACGCGCGGAGCAAAGCCGAGCTGACAGCCATGTTCAAGACAATCTCGCTGAACCTCAAACCGGGCGGCGTCTTC GTCGGCATAGTGCCGCATCCGACAGACGATCTGAAGCTCCGCGCGGCGGCGTACCGTAACCCGCGCTTCAGGAAT ACCTTTCCGCGGAACGAGTATACCGAAGAGCTCGAGTCGGGTGACGGATGGGGCCTGCAGGTCTCTCTGGACGAC GACGGCGTGCGCTTCATGACGTGGCACATGAAGCAGCGCGTCTACGAGGAGGCGGCCCGGCTCGGGGGCATGAAA GGGAGGCTGGAGTGGAGGCGCGAGCAGTTGTTCAAGGAGGAATGGGGGGAGAGATTCGGTCTAAGTCGCGAAGAG CTGCAGGCGCGGGAAGAAAACCCCCATCATGGCATACTCGTTGCATATAAAGATTAG |