Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9615
Gene name
LocationContig_71:12235..12586
Strand-
Gene length (bp)351
Transcript length (bp)351
Coding sequence length (bp)351
Protein length (aa) 117

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1355 0.0633 0.9373 0.1055 0.1267 0.0337 0.1441 0.1139 0.1124 0.0009

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999706

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup10972
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|9615 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9615
MMVKRTVLAVLAAVAVAAALPTDSFIPFADPTIGAAEDIFIPSGRQPPLVSKEDAALAARFRAAMADSARSARHI
FQGKQDTGPDSPPPAPPPPLRPDGIAVTGWVPPGRAHARTT*
Coding >Hirsu2|9615
ATGATGGTGAAGAGAACGGTGCTGGCGGTGCTGGCGGCCGTGGCCGTCGCGGCCGCGCTGCCGACGGACAGCTTC
ATCCCGTTCGCCGACCCGACCATCGGCGCGGCCGAGGACATCTTCATCCCGTCCGGACGGCAGCCGCCGCTGGTG
AGCAAGGAGGATGCCGCGCTGGCGGCCAGGTTCAGGGCGGCCATGGCGGACTCGGCCCGGTCTGCGCGGCACATC
TTCCAAGGCAAGCAAGACACGGGGCCAGACAGTCCGCCGCCGGCGCCGCCGCCCCCGCTAAGACCGGACGGCATC
GCAGTGACCGGCTGGGTCCCGCCGGGGAGGGCACATGCTCGGACCACATAG
Transcript >Hirsu2|9615
ATGATGGTGAAGAGAACGGTGCTGGCGGTGCTGGCGGCCGTGGCCGTCGCGGCCGCGCTGCCGACGGACAGCTTC
ATCCCGTTCGCCGACCCGACCATCGGCGCGGCCGAGGACATCTTCATCCCGTCCGGACGGCAGCCGCCGCTGGTG
AGCAAGGAGGATGCCGCGCTGGCGGCCAGGTTCAGGGCGGCCATGGCGGACTCGGCCCGGTCTGCGCGGCACATC
TTCCAAGGCAAGCAAGACACGGGGCCAGACAGTCCGCCGCCGGCGCCGCCGCCCCCGCTAAGACCGGACGGCATC
GCAGTGACCGGCTGGGTCCCGCCGGGGAGGGCACATGCTCGGACCACATAG
Gene >Hirsu2|9615
ATGATGGTGAAGAGAACGGTGCTGGCGGTGCTGGCGGCCGTGGCCGTCGCGGCCGCGCTGCCGACGGACAGCTTC
ATCCCGTTCGCCGACCCGACCATCGGCGCGGCCGAGGACATCTTCATCCCGTCCGGACGGCAGCCGCCGCTGGTG
AGCAAGGAGGATGCCGCGCTGGCGGCCAGGTTCAGGGCGGCCATGGCGGACTCGGCCCGGTCTGCGCGGCACATC
TTCCAAGGCAAGCAAGACACGGGGCCAGACAGTCCGCCGCCGGCGCCGCCGCCCCCGCTAAGACCGGACGGCATC
GCAGTGACCGGCTGGGTCCCGCCGGGGAGGGCACATGCTCGGACCACATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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