Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9606
Gene name
LocationContig_709:5998..6518
Strand-
Gene length (bp)520
Transcript length (bp)378
Coding sequence length (bp)378
Protein length (aa) 126

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 1.5E-06 54 105

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1155 0.0381 0.9769 0.066 0.0704 0.0593 0.1387 0.1696 0.1392 0.0046

SignalP

SignalP signal predicted Location Score
Yes 1 - 25 0.999746

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7153
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1534
Ophiocordyceps australis map64 (Brazil) OphauB2|4012
Ophiocordyceps subramaniannii Hirsu2|9606 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9606
MISSSRNSMSVALVFAALGVARVAAQAMHCVDGFTYVGCSAINLSCFGSPIVLPGGRLTPQACQEACQGHQWAAL
LPGACHCGEDARAVRAVAESECNYLCQDDPALGSNVIHDGGDLVLRGAFD*
Coding >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC
TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC
TGA
Transcript >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC
TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC
TGA
Gene >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGGTTCGTGCATCTCCTCGAGCAGCTTGTAGCTTGTTATTGTCTTTCTGACCGCCCTCCAGCGCCTGCC
ACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTCTGCCAGGACGACCCGG
CCCTTGGGGTCTGTGGAGGTGTTGGCCAAGTCGACGGCGTAGGCATCGCCAACGTCTATGGACACTCGGACTCGA
CGCCGCAGGAGCCTAGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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