Protein ID | Hirsu2|9606 |
Gene name | |
Location | Contig_709:5998..6518 |
Strand | - |
Gene length (bp) | 520 |
Transcript length (bp) | 378 |
Coding sequence length (bp) | 378 |
Protein length (aa) | 126 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01822 | WSC | WSC domain | 1.5E-06 | 54 | 105 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1155 | 0.0381 | 0.9769 | 0.066 | 0.0704 | 0.0593 | 0.1387 | 0.1696 | 0.1392 | 0.0046 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 25 | 0.999746 |
Orthofinder run ID | 4 |
Orthogroup | 7153 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|1534 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|4012 |
Ophiocordyceps subramaniannii | Hirsu2|9606 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9606 MISSSRNSMSVALVFAALGVARVAAQAMHCVDGFTYVGCSAINLSCFGSPIVLPGGRLTPQACQEACQGHQWAAL LPGACHCGEDARAVRAVAESECNYLCQDDPALGSNVIHDGGDLVLRGAFD* |
Coding | >Hirsu2|9606 ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC TGA |
Transcript | >Hirsu2|9606 ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC TGA |
Gene | >Hirsu2|9606 ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT CTGCCTGGGTTCGTGCATCTCCTCGAGCAGCTTGTAGCTTGTTATTGTCTTTCTGACCGCCCTCCAGCGCCTGCC ACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTCTGCCAGGACGACCCGG CCCTTGGGGTCTGTGGAGGTGTTGGCCAAGTCGACGGCGTAGGCATCGCCAACGTCTATGGACACTCGGACTCGA CGCCGCAGGAGCCTAGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGACTGA |