Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9606
Gene name
LocationContig_709:5998..6518
Strand-
Gene length (bp)520
Transcript length (bp)378
Coding sequence length (bp)378
Protein length (aa) 126

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01822 WSC WSC domain 1.5E-06 54 105

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9606
MISSSRNSMSVALVFAALGVARVAAQAMHCVDGFTYVGCSAINLSCFGSPIVLPGGRLTPQACQEACQGHQWAAL
LPGACHCGEDARAVRAVAESECNYLCQDDPALGSNVIHDGGDLVLRGAFD*
Coding >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC
TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC
TGA
Transcript >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGCGCCTGCCACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTC
TGCCAGGACGACCCGGCCCTTGGGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGAC
TGA
Gene >Hirsu2|9606
ATGATATCCAGCAGCCGAAACAGCATGAGCGTCGCCCTCGTCTTTGCCGCCTTGGGCGTCGCCCGCGTTGCCGCT
CAGGCGATGCACTGCGTCGACGGCTTCACGTACGTGGGCTGTTCGGCCATCAATCTGTCGTGTTTCGGCAGCCCC
ATCGTCCTTCCTGGCGGACGCTTGACGCCCCAGGCTTGCCAGGAGGCCTGCCAAGGCCACCAGTGGGCCGCTCTT
CTGCCTGGGTTCGTGCATCTCCTCGAGCAGCTTGTAGCTTGTTATTGTCTTTCTGACCGCCCTCCAGCGCCTGCC
ACTGCGGTGAGGATGCGAGGGCTGTCAGGGCCGTGGCGGAGAGCGAGTGCAACTACCTCTGCCAGGACGACCCGG
CCCTTGGGGTCTGTGGAGGTGTTGGCCAAGTCGACGGCGTAGGCATCGCCAACGTCTATGGACACTCGGACTCGA
CGCCGCAGGAGCCTAGTCCAATGTCATTCACGACGGTGGCGACCTTGTCCTTCGCGGCGCCTTCGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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