Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|960
Gene name
LocationContig_12:51198..52598
Strand+
Gene length (bp)1400
Transcript length (bp)1104
Coding sequence length (bp)1104
Protein length (aa) 368

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 1.5E-30 149 271

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 109 357 8.0E-43
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 134 357 4.0E-40
sp|Q06702|CDA1_YEAST Chitin deacetylase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA1 PE=1 SV=1 149 350 3.0E-17
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 149 254 5.0E-16
sp|P50325|CDA_AMYRO Chitin deacetylase OS=Amylomyces rouxii PE=1 SV=1 151 302 1.0E-15
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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 109 357 8.0E-43
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 134 357 4.0E-40
sp|Q06702|CDA1_YEAST Chitin deacetylase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA1 PE=1 SV=1 149 350 3.0E-17
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 149 254 5.0E-16
sp|P50325|CDA_AMYRO Chitin deacetylase OS=Amylomyces rouxii PE=1 SV=1 151 302 1.0E-15
sp|Q8DP63|PGDA_STRR6 Peptidoglycan-N-acetylglucosamine deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pgdA PE=1 SV=1 149 256 1.0E-15
sp|O34798|PDAC_BACSU Peptidoglycan-N-acetylmuramic acid deacetylase PdaC OS=Bacillus subtilis (strain 168) GN=pdaC PE=1 SV=1 149 347 3.0E-14
sp|Q06703|CDA2_YEAST Chitin deacetylase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDA2 PE=1 SV=1 140 349 3.0E-13
sp|P54865|XYND_CELFI Bifunctional xylanase/deacetylase OS=Cellulomonas fimi GN=xynD PE=1 SV=1 143 293 6.0E-13
sp|P50355|NODB_RHISN Chitooligosaccharide deacetylase OS=Rhizobium sp. (strain NGR234) GN=nodB PE=3 SV=2 148 239 1.0E-12
sp|P50354|NODB_RHIGA Chitooligosaccharide deacetylase OS=Rhizobium galegae GN=nodB PE=3 SV=1 149 278 2.0E-12
sp|Q04729|YFUM2_GEOSE Uncharacterized 30.6 kDa protein in fumA 3'region OS=Geobacillus stearothermophilus PE=3 SV=1 149 277 8.0E-12
sp|P02963|NODB_RHIME Chitooligosaccharide deacetylase OS=Rhizobium meliloti (strain 1021) GN=nodB PE=3 SV=3 148 254 1.0E-11
sp|Q52845|NODB_RHILO Chitooligosaccharide deacetylase OS=Rhizobium loti (strain MAFF303099) GN=nodB PE=3 SV=2 148 256 2.0E-10
sp|P04675|NODB_BRASP Chitooligosaccharide deacetylase OS=Bradyrhizobium sp. (strain ANU 289) GN=nodB PE=3 SV=2 148 278 3.0E-10
sp|P50352|NODB_BRAEL Chitooligosaccharide deacetylase OS=Bradyrhizobium elkanii GN=nodB PE=3 SV=1 148 278 5.0E-10
sp|O34928|PDAA_BACSU Peptidoglycan-N-acetylmuramic acid deacetylase PdaA OS=Bacillus subtilis (strain 168) GN=pdaA PE=1 SV=1 149 277 4.0E-09
sp|P82476|CDA_CRYNH Chitin deacetylase OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CNAG_01239 PE=1 SV=3 150 323 4.0E-09
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 148 239 5.0E-09
sp|Q07740|NODB_AZOC5 Chitooligosaccharide deacetylase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=nodB PE=3 SV=2 137 303 6.0E-09
sp|P0CP76|CDA_CRYNJ Chitin deacetylase OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=MP 84 PE=2 SV=1 150 261 1.0E-08
sp|P04339|NODB_RHILV Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. viciae GN=nodB PE=3 SV=1 149 232 1.0E-08
sp|P0CP77|CDA_CRYNB Chitin deacetylase OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=MP 84 PE=3 SV=1 150 261 2.0E-08
sp|P24150|NODB_RHILP Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. phaseoli GN=nodB PE=3 SV=1 151 327 7.0E-08
sp|P50850|YLXY_BACSU Uncharacterized protein YlxY OS=Bacillus subtilis (strain 168) GN=ylxY PE=3 SV=2 160 291 3.0E-07
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GO

GO Term Description Terminal node
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0005975 carbohydrate metabolic process Yes
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1129 0.0426 0.9655 0.1134 0.0891 0.0488 0.1976 0.1823 0.3307 0.0106

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category E-value Start End
CE4 5.1E-31 149 273

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup88
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3130
Ophiocordyceps australis 1348a (Ghana) OphauG2|438
Ophiocordyceps australis map64 (Brazil) OphauB2|1465
Ophiocordyceps australis map64 (Brazil) OphauB2|230
Ophiocordyceps camponoti-floridani Ophcf2|03614
Ophiocordyceps camponoti-floridani Ophcf2|06957
Ophiocordyceps camponoti-floridani Ophcf2|05927
Ophiocordyceps camponoti-rufipedis Ophun1|481
Ophiocordyceps camponoti-rufipedis Ophun1|6139
Ophiocordyceps camponoti-rufipedis Ophun1|5221
Ophiocordyceps kimflemingae Ophio5|24
Ophiocordyceps kimflemingae Ophio5|7553
Ophiocordyceps kimflemingae Ophio5|7800
Ophiocordyceps subramaniannii Hirsu2|960 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5438
Ophiocordyceps subramaniannii Hirsu2|3901
Ophiocordyceps subramaniannii Hirsu2|3201

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|960
MLIQRHLRLVGLAAVAECVAAGARLRPERWYPAEVGRRPELSAAPVLRGGASDADAGFSSVAKRQPAPAARCGVK
FGAACQKGECCSKEGWCGQGYLYCSSPACQLDYSDSCDGNIRPQGRDTTNVPRPHRGSVPYGQAIYHCEALGGVA
LTFDDGPFVYTEYLLDLLASYHVKATFFITGRNLGKGAINDPAKPWPGLIRRMARDGHQVASHTWSHQRLTLLGR
DQVRNQVIYNEVALADILGFFPTYIRPPYSASDGRVDGWLAELGYHVTYFNLDTEGYLHDSPALIQQSKQIWDDA
VAGRDPGASRWLQIEHDIVYQSVYNLTEHVLRSLARTGLRAVTVGECLGDPPENWYRRLGPPTPGPP*
Coding >Hirsu2|960
ATGTTGATTCAGCGGCATCTGCGCCTCGTGGGGCTGGCTGCCGTCGCGGAGTGCGTGGCCGCCGGGGCACGACTG
CGTCCCGAGAGGTGGTACCCCGCCGAGGTCGGCCGCCGGCCGGAGCTTTCTGCCGCGCCGGTGCTTCGGGGTGGG
GCCTCCGATGCCGATGCGGGTTTTTCGTCCGTGGCAAAGCGGCAACCTGCCCCGGCGGCCCGGTGTGGAGTTAAG
TTTGGGGCTGCGTGCCAGAAGGGAGAGTGTTGCTCCAAAGAAGGGTGGTGCGGCCAAGGATATCTGTACTGCTCC
TCTCCAGCCTGTCAGCTCGACTACAGCGACAGCTGCGATGGCAACATCCGTCCCCAGGGACGAGACACTACAAAC
GTGCCGCGTCCGCACCGGGGCTCCGTCCCGTACGGCCAGGCCATCTATCACTGCGAGGCCCTCGGCGGCGTCGCC
CTCACGTTCGATGACGGGCCCTTCGTCTATACGGAATACCTCCTCGACTTGCTTGCTTCGTACCACGTCAAGGCG
ACCTTCTTCATCACCGGCCGAAACCTGGGCAAGGGCGCCATCAACGACCCGGCCAAGCCGTGGCCGGGCCTGATC
CGGCGCATGGCCCGGGACGGCCACCAGGTGGCGAGCCACACGTGGTCGCACCAGCGGCTGACGCTGCTCGGGCGC
GACCAGGTCCGCAACCAGGTCATCTACAACGAGGTGGCCCTGGCCGACATCCTCGGCTTCTTCCCGACCTACATC
CGGCCGCCCTACTCGGCCAGCGACGGCCGAGTGGACGGCTGGCTGGCCGAGCTGGGCTACCACGTCACCTACTTC
AACCTCGACACCGAGGGCTACCTGCACGACAGCCCGGCCCTGATCCAGCAGTCGAAGCAGATCTGGGACGACGCG
GTCGCCGGCCGCGACCCCGGGGCCAGCCGGTGGCTGCAGATCGAGCACGACATCGTCTATCAGTCCGTCTACAAC
CTGACCGAGCACGTGCTGCGCTCGCTCGCCCGGACCGGCCTCCGCGCCGTCACGGTGGGCGAGTGTCTCGGCGAC
CCGCCCGAAAACTGGTATCGCCGGCTCGGACCTCCAACGCCGGGGCCCCCCTGA
Transcript >Hirsu2|960
ATGTTGATTCAGCGGCATCTGCGCCTCGTGGGGCTGGCTGCCGTCGCGGAGTGCGTGGCCGCCGGGGCACGACTG
CGTCCCGAGAGGTGGTACCCCGCCGAGGTCGGCCGCCGGCCGGAGCTTTCTGCCGCGCCGGTGCTTCGGGGTGGG
GCCTCCGATGCCGATGCGGGTTTTTCGTCCGTGGCAAAGCGGCAACCTGCCCCGGCGGCCCGGTGTGGAGTTAAG
TTTGGGGCTGCGTGCCAGAAGGGAGAGTGTTGCTCCAAAGAAGGGTGGTGCGGCCAAGGATATCTGTACTGCTCC
TCTCCAGCCTGTCAGCTCGACTACAGCGACAGCTGCGATGGCAACATCCGTCCCCAGGGACGAGACACTACAAAC
GTGCCGCGTCCGCACCGGGGCTCCGTCCCGTACGGCCAGGCCATCTATCACTGCGAGGCCCTCGGCGGCGTCGCC
CTCACGTTCGATGACGGGCCCTTCGTCTATACGGAATACCTCCTCGACTTGCTTGCTTCGTACCACGTCAAGGCG
ACCTTCTTCATCACCGGCCGAAACCTGGGCAAGGGCGCCATCAACGACCCGGCCAAGCCGTGGCCGGGCCTGATC
CGGCGCATGGCCCGGGACGGCCACCAGGTGGCGAGCCACACGTGGTCGCACCAGCGGCTGACGCTGCTCGGGCGC
GACCAGGTCCGCAACCAGGTCATCTACAACGAGGTGGCCCTGGCCGACATCCTCGGCTTCTTCCCGACCTACATC
CGGCCGCCCTACTCGGCCAGCGACGGCCGAGTGGACGGCTGGCTGGCCGAGCTGGGCTACCACGTCACCTACTTC
AACCTCGACACCGAGGGCTACCTGCACGACAGCCCGGCCCTGATCCAGCAGTCGAAGCAGATCTGGGACGACGCG
GTCGCCGGCCGCGACCCCGGGGCCAGCCGGTGGCTGCAGATCGAGCACGACATCGTCTATCAGTCCGTCTACAAC
CTGACCGAGCACGTGCTGCGCTCGCTCGCCCGGACCGGCCTCCGCGCCGTCACGGTGGGCGAGTGTCTCGGCGAC
CCGCCCGAAAACTGGTATCGCCGGCTCGGACCTCCAACGCCGGGGCCCCCCTGA
Gene >Hirsu2|960
ATGTTGATTCAGCGGCATCTGCGCCTCGTGGGGCTGGCTGCCGTCGCGGAGTGCGTGGCCGCCGGGGCACGACTG
CGTCCCGAGAGGTGGTACCCCGCCGAGGTCGGCCGCCGGCCGGAGCTTTCTGCCGCGCCGGTGCTTCGGGGTGGG
GCCTCCGATGCCGATGCGGGTTTTTCGTCCGTGGCAAAGCGGCAACCTGCCCCGGCGGCCCGGTGTGGAGTTAAG
TTTGGGGCTGCGTGCCAGAAGGGAGAGTGTTGCTCCAAAGAAGGGTGAGACTTTGCTCCCCCTATTCTGTGTTTT
TCGCTTTCTGTTTTTCTCCGGCTTTTTGGTGAATGGCAATGTAACGACGTGGCACACACAGGTGGTGCGGCCAAG
GATATCTGTACTGCTCCTCTCCAGCCTGTCAGCTCGACTACAGCGACAGCTGCGATGGCAACATCCGTCCCCAGG
GACGAGACACTACAAACGTGCCGCGTCCGCACCGGGGCTCCGTCCCGTACGGCCAGGCCATCTATCACTGCGAGG
CCCTCGGCGGCGTCGCCCTCACGTTCGATGACGGGCCCTTCGTCTATACGGAATACCTCCTCGACTTGCTTGCTG
TACGTCACTCCCCCCTCCCAGACACGTCTGCGATTCGGTGTCTCCCGGGCCGTCTGCGCTCTTGAGGATAAGCCG
AGATAGCGCCGGCTCGTCCGTCAAGACGATGGAGAGAGCAGAGCCAAGATGGAGGAGAAGAGAATGTTGACAAAG
GAGCACGAAAACAACCCCCGCCCCCTTTTCTCTCTCCCGCGCCGAGCCCACAGTCGTACCACGTCAAGGCGACCT
TCTTCATCACCGGCCGAAACCTGGGCAAGGGCGCCATCAACGACCCGGCCAAGCCGTGGCCGGGCCTGATCCGGC
GCATGGCCCGGGACGGCCACCAGGTGGCGAGCCACACGTGGTCGCACCAGCGGCTGACGCTGCTCGGGCGCGACC
AGGTCCGCAACCAGGTCATCTACAACGAGGTGGCCCTGGCCGACATCCTCGGCTTCTTCCCGACCTACATCCGGC
CGCCCTACTCGGCCAGCGACGGCCGAGTGGACGGCTGGCTGGCCGAGCTGGGCTACCACGTCACCTACTTCAACC
TCGACACCGAGGGCTACCTGCACGACAGCCCGGCCCTGATCCAGCAGTCGAAGCAGATCTGGGACGACGCGGTCG
CCGGCCGCGACCCCGGGGCCAGCCGGTGGCTGCAGATCGAGCACGACATCGTCTATCAGTCCGTCTACAACCTGA
CCGAGCACGTGCTGCGCTCGCTCGCCCGGACCGGCCTCCGCGCCGTCACGGTGGGCGAGTGTCTCGGCGACCCGC
CCGAAAACTGGTATCGCCGGCTCGGACCTCCAACGCCGGGGCCCCCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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