© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|96 |
| Gene name | |
| Location | Contig_1011:8713..9229 |
| Strand | + |
| Gene length (bp) | 516 |
| Transcript length (bp) | 444 |
| Coding sequence length (bp) | 444 |
| Protein length (aa) | 148 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion|Endoplasmic reticulum | Mitochondrial transit peptide | 0.1016 | 0.2373 | 0.1191 | 0.061 | 0.7485 | 0.2754 | 0.6883 | 0.2164 | 0.2461 | 0.3034 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 89 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 5777 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|96 MAPVDDEGAAAAPQDKSLTTRLHEWGSSSLPPCLLATLITALHARPLQPLPLVLFVPPLLSASYLNLAGYATGSA GLAAAWSGLYALLALRRRQPLRAKFSARGAVRAAAVGLGAANCAAGSWVYVRGDFDRDEEERRRRNRWGGAE* |
| Coding | >Hirsu2|96 ATGGCGCCTGTCGACGACGAGGGCGCGGCCGCCGCGCCGCAGGACAAGTCTCTCACCACGAGGCTGCACGAATGG GGCTCGTCGTCGCTGCCGCCGTGCCTGCTGGCGACGCTGATCACGGCGCTGCACGCGCGGCCGCTGCAGCCGCTG CCGCTTGTCCTCTTCGTGCCGCCGCTGCTGTCGGCCTCGTACCTCAACCTGGCCGGCTACGCGACCGGCAGCGCC GGCCTGGCCGCCGCCTGGTCCGGCCTGTACGCGCTGCTGGCCCTGCGCCGCCGCCAGCCGCTGCGCGCCAAGTTC TCGGCGCGCGGCGCCGTCCGCGCTGCTGCCGTCGGCCTCGGTGCTGCCAACTGCGCTGCCGGCTCCTGGGTCTAC GTCCGCGGCGACTTTGACCGGGACGAGGAGGAGCGCCGGCGGAGGAATCGCTGGGGGGGTGCTGAGTGA |
| Transcript | >Hirsu2|96 ATGGCGCCTGTCGACGACGAGGGCGCGGCCGCCGCGCCGCAGGACAAGTCTCTCACCACGAGGCTGCACGAATGG GGCTCGTCGTCGCTGCCGCCGTGCCTGCTGGCGACGCTGATCACGGCGCTGCACGCGCGGCCGCTGCAGCCGCTG CCGCTTGTCCTCTTCGTGCCGCCGCTGCTGTCGGCCTCGTACCTCAACCTGGCCGGCTACGCGACCGGCAGCGCC GGCCTGGCCGCCGCCTGGTCCGGCCTGTACGCGCTGCTGGCCCTGCGCCGCCGCCAGCCGCTGCGCGCCAAGTTC TCGGCGCGCGGCGCCGTCCGCGCTGCTGCCGTCGGCCTCGGTGCTGCCAACTGCGCTGCCGGCTCCTGGGTCTAC GTCCGCGGCGACTTTGACCGGGACGAGGAGGAGCGCCGGCGGAGGAATCGCTGGGGGGGTGCTGAGTGA |
| Gene | >Hirsu2|96 ATGGCGCCTGTCGACGACGAGGGCGCGGCCGCCGCGCCGCAGGACAAGTCTCTCACCACGAGGCTGCACGAATGG GGCTGTGAGTCCCTCCATCCAACTACCGCCCCCCTCACGGTCCGATCGCGACTGACGAAACCCGCTTCCCGGCCA GCGTCGTCGCTGCCGCCGTGCCTGCTGGCGACGCTGATCACGGCGCTGCACGCGCGGCCGCTGCAGCCGCTGCCG CTTGTCCTCTTCGTGCCGCCGCTGCTGTCGGCCTCGTACCTCAACCTGGCCGGCTACGCGACCGGCAGCGCCGGC CTGGCCGCCGCCTGGTCCGGCCTGTACGCGCTGCTGGCCCTGCGCCGCCGCCAGCCGCTGCGCGCCAAGTTCTCG GCGCGCGGCGCCGTCCGCGCTGCTGCCGTCGGCCTCGGTGCTGCCAACTGCGCTGCCGGCTCCTGGGTCTACGTC CGCGGCGACTTTGACCGGGACGAGGAGGAGCGCCGGCGGAGGAATCGCTGGGGGGGTGCTGAGTGA |