© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9582 |
| Gene name | |
| Location | Contig_704:7725..9294 |
| Strand | + |
| Gene length (bp) | 1569 |
| Transcript length (bp) | 1455 |
| Coding sequence length (bp) | 1455 |
| Protein length (aa) | 485 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.1E-16 | 198 | 301 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 5.6E-11 | 204 | 292 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.9E-10 | 201 | 304 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 6.8E-08 | 205 | 294 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.9E-05 | 205 | 294 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.7271 | 0.4055 | 0.0323 | 0.1273 | 0.154 | 0.0134 | 0.3314 | 0.2034 | 0.2122 | 0.0114 |
| Orthofinder run ID | 4 |
| Orthogroup | 4573 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9582 MAKKRRFKHQGPFASATKTVAMSAHDPPFANPLRSARLSSDGTPSEGAASEGALTAMTSVIDTDDDFEPSSLSAP DHHYHHHHHRHNDHVRLDARHDARPLYRDASDDYDDYDYDDDDDELETESLYPVSHYPRSTSPHGTVMQFYLDDP RNAYSDNAASTRSLEYYMPNDEIEQLRLSLQHQVFLHLLKGDVTCVPLEDPKYILDVGTGTGEWPIRMAELFPHC EVVGTDISAIAETQSVPMNVFFEIEDAEEWDRPSDHYDLIHFRCMEGAFRDWRYIYDSVYDSLKPGGYIELIDFD SLESVKIWFTAFSEGSPIFDMARDLEIAAEKIGRKRGIAHMDPQLLVESGFVDVEVTEHAIPMLVGEKSAGKLWL ISCLDALEANCLRLLTQQMGWDPEKCKVACEQAARELANLAKDPEKAKGLLVKARTIAARKPLEARSRSASQSPS RSPSAELDGSRHVTVVSAGPDDPLRYLSGRDQPR* |
| Coding | >Hirsu2|9582 ATGGCCAAAAAGCGTCGCTTCAAACACCAAGGCCCGTTCGCCTCCGCCACCAAGACCGTCGCCATGTCGGCCCAC GACCCCCCCTTCGCCAACCCCCTGCGCAGCGCCAGGCTCTCGAGCGACGGCACCCCCAGCGAGGGCGCCGCCAGC GAGGGCGCCCTGACGGCCATGACGAGCGTCATCGACACCGACGACGACTTCGAACCCAGCAGCCTGTCCGCACCA GACCACCACTATCACCACCACCACCATCGCCACAATGACCACGTCCGCCTCGACGCCCGCCACGACGCCCGCCCC CTCTACCGCGATGCCAGCGACGACTACGACGACTACGACTACGACGACGACGACGACGAGCTAGAGACCGAGTCC CTGTATCCAGTCAGCCACTATCCTCGGTCCACCAGCCCTCACGGAACCGTCATGCAGTTCTACCTTGACGACCCC AGGAATGCCTATTCTGACAACGCCGCCTCGACCCGATCACTGGAGTACTACATGCCCAACGATGAGATCGAGCAG CTGCGCCTCTCGCTGCAGCACCAGGTCTTCCTGCACCTGCTCAAGGGCGACGTGACGTGCGTCCCGCTCGAGGAT CCCAAGTACATACTCGACGTCGGTACCGGCACCGGCGAGTGGCCCATCCGCATGGCCGAGCTCTTCCCCCATTGC GAGGTGGTTGGCACCGACATCTCCGCCATCGCCGAGACCCAGAGCGTGCCCATGAACGTCTTCTTCGAGATCGAA GACGCCGAGGAGTGGGACCGGCCCTCGGACCACTACGATCTCATCCACTTCCGCTGCATGGAGGGCGCCTTCCGC GACTGGCGCTACATCTACGACAGCGTCTACGACTCGCTCAAGCCGGGCGGCTACATCGAGCTCATCGACTTCGAC AGCCTCGAGTCGGTCAAGATCTGGTTCACCGCCTTCTCCGAGGGCTCCCCCATCTTCGACATGGCCCGGGACCTC GAGATTGCGGCCGAGAAGATTGGCAGGAAGCGCGGCATAGCGCACATGGATCCGCAGCTCCTCGTCGAGTCGGGC TTCGTCGACGTCGAGGTGACGGAGCACGCCATCCCCATGTTGGTCGGCGAGAAGTCGGCCGGCAAGCTCTGGCTG ATATCGTGCCTCGACGCCCTCGAGGCCAACTGCCTCCGCCTCCTCACGCAACAGATGGGGTGGGACCCGGAAAAG TGCAAGGTGGCCTGCGAGCAGGCGGCGCGCGAGCTGGCCAACCTGGCCAAGGATCCGGAAAAGGCAAAGGGTCTC CTGGTCAAGGCACGGACCATCGCGGCCAGGAAGCCGCTCGAGGCCCGCTCCCGCTCCGCCTCGCAAAGCCCGTCG AGATCGCCCAGCGCCGAGCTGGACGGGTCCCGCCACGTCACCGTCGTCTCCGCCGGACCCGACGACCCCCTGAGA TACCTGTCGGGCCGGGACCAGCCAAGGTAG |
| Transcript | >Hirsu2|9582 ATGGCCAAAAAGCGTCGCTTCAAACACCAAGGCCCGTTCGCCTCCGCCACCAAGACCGTCGCCATGTCGGCCCAC GACCCCCCCTTCGCCAACCCCCTGCGCAGCGCCAGGCTCTCGAGCGACGGCACCCCCAGCGAGGGCGCCGCCAGC GAGGGCGCCCTGACGGCCATGACGAGCGTCATCGACACCGACGACGACTTCGAACCCAGCAGCCTGTCCGCACCA GACCACCACTATCACCACCACCACCATCGCCACAATGACCACGTCCGCCTCGACGCCCGCCACGACGCCCGCCCC CTCTACCGCGATGCCAGCGACGACTACGACGACTACGACTACGACGACGACGACGACGAGCTAGAGACCGAGTCC CTGTATCCAGTCAGCCACTATCCTCGGTCCACCAGCCCTCACGGAACCGTCATGCAGTTCTACCTTGACGACCCC AGGAATGCCTATTCTGACAACGCCGCCTCGACCCGATCACTGGAGTACTACATGCCCAACGATGAGATCGAGCAG CTGCGCCTCTCGCTGCAGCACCAGGTCTTCCTGCACCTGCTCAAGGGCGACGTGACGTGCGTCCCGCTCGAGGAT CCCAAGTACATACTCGACGTCGGTACCGGCACCGGCGAGTGGCCCATCCGCATGGCCGAGCTCTTCCCCCATTGC GAGGTGGTTGGCACCGACATCTCCGCCATCGCCGAGACCCAGAGCGTGCCCATGAACGTCTTCTTCGAGATCGAA GACGCCGAGGAGTGGGACCGGCCCTCGGACCACTACGATCTCATCCACTTCCGCTGCATGGAGGGCGCCTTCCGC GACTGGCGCTACATCTACGACAGCGTCTACGACTCGCTCAAGCCGGGCGGCTACATCGAGCTCATCGACTTCGAC AGCCTCGAGTCGGTCAAGATCTGGTTCACCGCCTTCTCCGAGGGCTCCCCCATCTTCGACATGGCCCGGGACCTC GAGATTGCGGCCGAGAAGATTGGCAGGAAGCGCGGCATAGCGCACATGGATCCGCAGCTCCTCGTCGAGTCGGGC TTCGTCGACGTCGAGGTGACGGAGCACGCCATCCCCATGTTGGTCGGCGAGAAGTCGGCCGGCAAGCTCTGGCTG ATATCGTGCCTCGACGCCCTCGAGGCCAACTGCCTCCGCCTCCTCACGCAACAGATGGGGTGGGACCCGGAAAAG TGCAAGGTGGCCTGCGAGCAGGCGGCGCGCGAGCTGGCCAACCTGGCCAAGGATCCGGAAAAGGCAAAGGGTCTC CTGGTCAAGGCACGGACCATCGCGGCCAGGAAGCCGCTCGAGGCCCGCTCCCGCTCCGCCTCGCAAAGCCCGTCG AGATCGCCCAGCGCCGAGCTGGACGGGTCCCGCCACGTCACCGTCGTCTCCGCCGGACCCGACGACCCCCTGAGA TACCTGTCGGGCCGGGACCAGCCAAGGTAG |
| Gene | >Hirsu2|9582 ATGGCCAAAAAGCGTCGCTTCAAACACCAAGGCCCGTTCGCCTCCGCCACCAAGACCGTCGCCATGTCGGCCCAC GACCCCCCCTTCGCCAACCCCCTGCGCAGCGCCAGGCTCTCGAGCGACGGCACCCCCAGCGAGGGCGCCGCCAGC GAGGGCGCCCTGACGGCCATGACGAGCGTCATCGACACCGACGACGACTTCGAACCCAGCAGCCTGTCCGCACCA GACCACCACTATCACCACCACCACCATCGCCACAATGACCACGTCCGCCTCGACGCCCGCCACGACGCCCGCCCC CTCTACCGCGATGCCAGCGACGACTACGACGACTACGACTACGACGACGACGACGACGAGCTAGAGACCGAGTCC CTGTATCCAGTCAGCCACTATCCTCGGTCCACCAGCCCTCACGGAACCGTCATGCAGTTCTACCTTGACGACCCC AGGAATGCCTATTCTGACAAGTGAGTGGTATCGCCCTGCTCTGCCTGACCCACCGCTGACCCGGCACCCCTCTTC CCTCGCAGCGCCGCCTCGACCCGATCACTGTGGGTTCCAGACCTCGACTATCGCGAGATCCACGGCCGACGGTAC TGCAGGGAGTACTACATGCCCAACGATGAGATCGAGCAGCTGCGCCTCTCGCTGCAGCACCAGGTCTTCCTGCAC CTGCTCAAGGGCGACGTGACGTGCGTCCCGCTCGAGGATCCCAAGTACATACTCGACGTCGGTACCGGCACCGGC GAGTGGCCCATCCGCATGGCCGAGCTCTTCCCCCATTGCGAGGTGGTTGGCACCGACATCTCCGCCATCGCCGAG ACCCAGAGCGTGCCCATGAACGTCTTCTTCGAGATCGAAGACGCCGAGGAGTGGGACCGGCCCTCGGACCACTAC GATCTCATCCACTTCCGCTGCATGGAGGGCGCCTTCCGCGACTGGCGCTACATCTACGACAGCGTCTACGACTCG CTCAAGCCGGGCGGCTACATCGAGCTCATCGACTTCGACAGCCTCGAGTCGGTCAAGATCTGGTTCACCGCCTTC TCCGAGGGCTCCCCCATCTTCGACATGGCCCGGGACCTCGAGATTGCGGCCGAGAAGATTGGCAGGAAGCGCGGC ATAGCGCACATGGATCCGCAGCTCCTCGTCGAGTCGGGCTTCGTCGACGTCGAGGTGACGGAGCACGCCATCCCC ATGTTGGTCGGCGAGAAGTCGGCCGGCAAGCTCTGGCTGATATCGTGCCTCGACGCCCTCGAGGCCAACTGCCTC CGCCTCCTCACGCAACAGATGGGGTGGGACCCGGAAAAGTGCAAGGTGGCCTGCGAGCAGGCGGCGCGCGAGCTG GCCAACCTGGCCAAGGATCCGGAAAAGGCAAAGGGTCTCCTGGTCAAGGCACGGACCATCGCGGCCAGGAAGCCG CTCGAGGCCCGCTCCCGCTCCGCCTCGCAAAGCCCGTCGAGATCGCCCAGCGCCGAGCTGGACGGGTCCCGCCAC GTCACCGTCGTCTCCGCCGGACCCGACGACCCCCTGAGATACCTGTCGGGCCGGGACCAGCCAAGGTAG |