Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9578
Gene name
Location	Contig_703:37..430
Strand	+
Gene length (bp)	393
Transcript length (bp)	393
Coding sequence length (bp)	393
Protein length (aa)	131

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04479	RTA1	RTA1 like protein	2.0E-18	4	72

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0016021	integral component of membrane	Yes
GO:0005575	cellular_component	No
GO:0110165	cellular anatomical entity	No
GO:0031224	intrinsic component of membrane	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	27	20
2	47	69	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9578 LRASARFRGFLAALALSTVCILWRSAFRLAELREGWRGPVLARQGLFIGFEGVLVLVAVVALNVFHPVLCAPELF RPGAAFACCGRRRRAAADEDKASSVVDVPSVSKTHAVQEHGKELPSVSAPARPSL*
Coding	>Hirsu2\|9578 CTGCGCGCCTCGGCCCGCTTCCGGGGCTTCCTCGCCGCCCTCGCGCTCTCGACCGTCTGCATCCTGTGGCGCAGC GCCTTCCGCCTCGCCGAGCTCCGCGAGGGCTGGCGCGGCCCCGTCCTCGCCCGCCAGGGCCTCTTCATCGGCTTC GAGGGCGTCCTCGTCCTCGTTGCCGTCGTCGCCCTCAACGTCTTCCATCCCGTCCTCTGCGCACCCGAGCTCTTC CGCCCCGGCGCCGCCTTCGCCTGCTGCGGTCGCCGCCGCCGCGCCGCCGCCGACGAGGACAAGGCCTCGTCCGTC GTCGACGTCCCTTCCGTCAGCAAGACGCATGCTGTTCAGGAGCACGGAAAGGAGTTGCCCTCCGTCTCCGCTCCG GCCCGTCCATCGCTCTGA
Transcript	>Hirsu2\|9578 CTGCGCGCCTCGGCCCGCTTCCGGGGCTTCCTCGCCGCCCTCGCGCTCTCGACCGTCTGCATCCTGTGGCGCAGC GCCTTCCGCCTCGCCGAGCTCCGCGAGGGCTGGCGCGGCCCCGTCCTCGCCCGCCAGGGCCTCTTCATCGGCTTC GAGGGCGTCCTCGTCCTCGTTGCCGTCGTCGCCCTCAACGTCTTCCATCCCGTCCTCTGCGCACCCGAGCTCTTC CGCCCCGGCGCCGCCTTCGCCTGCTGCGGTCGCCGCCGCCGCGCCGCCGCCGACGAGGACAAGGCCTCGTCCGTC GTCGACGTCCCTTCCGTCAGCAAGACGCATGCTGTTCAGGAGCACGGAAAGGAGTTGCCCTCCGTCTCCGCTCCG GCCCGTCCATCGCTCTGA
Gene	>Hirsu2\|9578 CTGCGCGCCTCGGCCCGCTTCCGGGGCTTCCTCGCCGCCCTCGCGCTCTCGACCGTCTGCATCCTGTGGCGCAGC GCCTTCCGCCTCGCCGAGCTCCGCGAGGGCTGGCGCGGCCCCGTCCTCGCCCGCCAGGGCCTCTTCATCGGCTTC GAGGGCGTCCTCGTCCTCGTTGCCGTCGTCGCCCTCAACGTCTTCCATCCCGTCCTCTGCGCACCCGAGCTCTTC CGCCCCGGCGCCGCCTTCGCCTGCTGCGGTCGCCGCCGCCGCGCCGCCGCCGACGAGGACAAGGCCTCGTCCGTC GTCGACGTCCCTTCCGTCAGCAAGACGCATGCTGTTCAGGAGCACGGAAAGGAGTTGCCCTCCGTCTCCGCTCCG GCCCGTCCATCGCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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