© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9571 |
| Gene name | |
| Location | Contig_702:560..2214 |
| Strand | + |
| Gene length (bp) | 1654 |
| Transcript length (bp) | 1587 |
| Coding sequence length (bp) | 1587 |
| Protein length (aa) | 529 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01757 | Acyl_transf_3 | Acyltransferase family | 1.8E-38 | 105 | 507 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016746 | acyltransferase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum|Golgi apparatus | Signal peptide|Transmembrane domain | 0.1073 | 0.1904 | 0.0361 | 0.2068 | 0.1835 | 0.0287 | 0.7222 | 0.4313 | 0.6809 | 0.0551 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 153 | 172 | 19 |
| 2 | 199 | 221 | 22 |
| 3 | 279 | 301 | 22 |
| 4 | 480 | 502 | 22 |
| Orthofinder run ID | 4 |
| Orthogroup | 4567 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9571 MSGLPPSRTSFSEKMGLLNERAVSSDTESEADVAEVEQVADRWGLLSAKLYLAHFSSSLAALWDYLFSTSWRLWF LRLANFLVPSFLQGRHAREQICPAKLSPTAYLDGMRGLAALFVYFCHYSYQGFTIAKSWGCADSNYEVFKLPFLR LWYQGPQAVCVFFVISGYALSYRPLKLIRSRSISEFSTTMSSLVFRRGLRLYLPTAVSTLLIVCLLRVGAYEWTR DFANDRTYMRNIIEPHPLRMDNTYHQFRDWALHMYKFVHVFGWERFGGTTSYDVHLWTIPVEFRCSLYLFLVILG TARLQAKLRVLTVGGVMWFAYRHSRWDFLLFLGGMVLAEWDLARDAHASPPALPQDEKTVERPAQPLWKRLFWIS VSILGLYLLCQPDDGGDVTPGWRFLTSMIPSWWAEESYRYWQSAGAVVFVAAVGHTGGWQHFFNLPAIQYLGKIS YALYLMHGPAMHTVGYHFEKWAYSLTGVDGYWYNAGFALGACFCVPITIWWADVFWRAVDVPSVKFAKWVERRCV GKN* |
| Coding | >Hirsu2|9571 ATGAGCGGACTCCCCCCCTCGCGGACCTCCTTCTCGGAGAAGATGGGCCTCCTCAACGAGCGTGCCGTCTCCTCC GACACGGAGAGCGAGGCCGACGTCGCCGAGGTTGAACAGGTCGCCGACCGATGGGGCCTGCTCTCCGCCAAGCTG TATCTCGCCCACTTCTCGTCCTCGCTCGCCGCCCTCTGGGACTACCTCTTCTCGACCTCGTGGCGCCTCTGGTTC CTCCGCCTCGCCAACTTCCTCGTCCCCAGCTTCCTGCAGGGCCGCCACGCCCGCGAGCAGATATGCCCGGCCAAG CTGTCGCCCACGGCCTACCTCGACGGCATGCGCGGCCTGGCCGCCCTCTTCGTCTACTTCTGCCACTACTCGTAC CAGGGCTTCACCATCGCCAAGAGCTGGGGCTGCGCCGACTCCAACTACGAGGTCTTCAAGCTGCCCTTCCTCCGC CTGTGGTATCAGGGCCCCCAGGCCGTCTGCGTCTTCTTCGTCATCTCCGGCTACGCCCTGTCGTATCGTCCCCTG AAACTCATCCGCAGCCGCTCCATCTCCGAGTTCTCCACCACCATGAGCTCCCTCGTCTTCCGCCGCGGCCTCCGC CTGTACCTGCCCACGGCCGTCTCGACCCTGCTCATCGTCTGCCTCCTGCGCGTCGGCGCCTACGAGTGGACCCGC GACTTCGCCAATGACCGGACCTACATGCGCAACATCATCGAGCCGCACCCTCTTCGCATGGACAACACCTACCAC CAGTTCCGCGACTGGGCTCTGCACATGTACAAGTTCGTCCACGTCTTCGGCTGGGAGAGGTTTGGCGGAACCACT TCTTACGACGTGCACCTGTGGACCATTCCCGTCGAGTTCCGGTGCTCCCTCTACCTGTTCCTCGTCATCCTCGGC ACCGCCCGCCTGCAGGCCAAGCTCCGCGTCCTCACCGTCGGCGGTGTCATGTGGTTCGCCTACCGCCACTCCCGC TGGGACTTCCTCCTCTTCCTCGGCGGCATGGTCCTTGCCGAGTGGGATCTCGCCCGGGACGCCCACGCCAGCCCT CCCGCCTTGCCCCAGGACGAGAAGACGGTCGAGAGGCCGGCCCAGCCGCTGTGGAAGAGGCTTTTCTGGATCTCG GTCAGCATCCTCGGCCTCTACCTCCTCTGCCAGCCCGACGACGGGGGCGACGTGACGCCCGGGTGGCGCTTCCTG ACGTCGATGATCCCGTCGTGGTGGGCTGAGGAGTCGTACCGATACTGGCAGTCGGCCGGCGCCGTCGTCTTCGTG GCCGCCGTCGGGCACACGGGCGGCTGGCAGCACTTCTTCAACCTGCCCGCGATACAATACCTCGGCAAGATCTCG TACGCCCTGTACCTCATGCACGGGCCTGCCATGCACACGGTCGGCTATCACTTCGAGAAGTGGGCGTACAGCCTG ACGGGTGTGGACGGCTACTGGTACAATGCGGGCTTCGCGCTGGGCGCTTGCTTCTGCGTGCCCATCACCATCTGG TGGGCCGACGTGTTCTGGAGGGCCGTCGACGTGCCGTCGGTCAAGTTTGCCAAGTGGGTGGAGCGGAGGTGTGTG GGCAAGAACTGA |
| Transcript | >Hirsu2|9571 ATGAGCGGACTCCCCCCCTCGCGGACCTCCTTCTCGGAGAAGATGGGCCTCCTCAACGAGCGTGCCGTCTCCTCC GACACGGAGAGCGAGGCCGACGTCGCCGAGGTTGAACAGGTCGCCGACCGATGGGGCCTGCTCTCCGCCAAGCTG TATCTCGCCCACTTCTCGTCCTCGCTCGCCGCCCTCTGGGACTACCTCTTCTCGACCTCGTGGCGCCTCTGGTTC CTCCGCCTCGCCAACTTCCTCGTCCCCAGCTTCCTGCAGGGCCGCCACGCCCGCGAGCAGATATGCCCGGCCAAG CTGTCGCCCACGGCCTACCTCGACGGCATGCGCGGCCTGGCCGCCCTCTTCGTCTACTTCTGCCACTACTCGTAC CAGGGCTTCACCATCGCCAAGAGCTGGGGCTGCGCCGACTCCAACTACGAGGTCTTCAAGCTGCCCTTCCTCCGC CTGTGGTATCAGGGCCCCCAGGCCGTCTGCGTCTTCTTCGTCATCTCCGGCTACGCCCTGTCGTATCGTCCCCTG AAACTCATCCGCAGCCGCTCCATCTCCGAGTTCTCCACCACCATGAGCTCCCTCGTCTTCCGCCGCGGCCTCCGC CTGTACCTGCCCACGGCCGTCTCGACCCTGCTCATCGTCTGCCTCCTGCGCGTCGGCGCCTACGAGTGGACCCGC GACTTCGCCAATGACCGGACCTACATGCGCAACATCATCGAGCCGCACCCTCTTCGCATGGACAACACCTACCAC CAGTTCCGCGACTGGGCTCTGCACATGTACAAGTTCGTCCACGTCTTCGGCTGGGAGAGGTTTGGCGGAACCACT TCTTACGACGTGCACCTGTGGACCATTCCCGTCGAGTTCCGGTGCTCCCTCTACCTGTTCCTCGTCATCCTCGGC ACCGCCCGCCTGCAGGCCAAGCTCCGCGTCCTCACCGTCGGCGGTGTCATGTGGTTCGCCTACCGCCACTCCCGC TGGGACTTCCTCCTCTTCCTCGGCGGCATGGTCCTTGCCGAGTGGGATCTCGCCCGGGACGCCCACGCCAGCCCT CCCGCCTTGCCCCAGGACGAGAAGACGGTCGAGAGGCCGGCCCAGCCGCTGTGGAAGAGGCTTTTCTGGATCTCG GTCAGCATCCTCGGCCTCTACCTCCTCTGCCAGCCCGACGACGGGGGCGACGTGACGCCCGGGTGGCGCTTCCTG ACGTCGATGATCCCGTCGTGGTGGGCTGAGGAGTCGTACCGATACTGGCAGTCGGCCGGCGCCGTCGTCTTCGTG GCCGCCGTCGGGCACACGGGCGGCTGGCAGCACTTCTTCAACCTGCCCGCGATACAATACCTCGGCAAGATCTCG TACGCCCTGTACCTCATGCACGGGCCTGCCATGCACACGGTCGGCTATCACTTCGAGAAGTGGGCGTACAGCCTG ACGGGTGTGGACGGCTACTGGTACAATGCGGGCTTCGCGCTGGGCGCTTGCTTCTGCGTGCCCATCACCATCTGG TGGGCCGACGTGTTCTGGAGGGCCGTCGACGTGCCGTCGGTCAAGTTTGCCAAGTGGGTGGAGCGGAGGTGTGTG GGCAAGAACTGA |
| Gene | >Hirsu2|9571 ATGAGCGGACTCCCCCCCTCGCGGACCTCCTTCTCGGAGAAGATGGGCCTCCTCAACGAGCGTGCCGTCTCCTCC GACACGGAGAGCGAGGCCGACGTCGCCGAGGTTGAACAGGTCGCCGACCGATGGGGCCTGCTCTCCGCCAAGCTG TATCTCGCCCACTTCTCGTCCTCGCTCGCCGCCCTCTGGGACTACCTCTTCTCGACCTCGTGGCGCCTCTGGTTC CTCCGCCTCGCCAACTTCCTCGTCCCCAGCTTCCTGCAGGGCCGCCACGCCCGCGAGCAGATATGCCCGGCCAAG CTGTCGCCCACGGCCTACCTCGACGGCATGCGCGGCCTGGCCGCCCTCTTCGTCTACTTCTGCCACTACTCGTAC CAGGGCTTCACCATCGCCAAGAGCTGGGGCTGCGCCGACTCCAACTACGAGGTCTTCAAGCTGCCCTTCCTCCGC CTGTGGTATCAGGGCCCCCAGGCCGTCTGCGTCTTCTTCGTCATCTCCGGCTACGCCCTGTCGTATCGTCCCCTG AAACTCATCCGCAGCCGCTCCATCTCCGAGTTCTCCACCACCATGAGCTCCCTCGTCTTCCGCCGCGGCCTCCGC CTGTACCTGCCCACGGCCGTCTCGACCCTGCTCATCGTCTGCCTCCTGCGCGTCGGCGCCTACGAGTGGACCCGC GACTTCGCCAATGACCGGACCTACATGCGCAACATCATCGAGCCGCACCCTCTTCGCATGGACAACACCTACCAC CAGTTCCGCGACTGGGCTCTGCACATGTACAAGTTCGTCCACGTCTTCGGCTGGGAGAGGTTTGGCGGAACCACT TGTAAGAGCCCCACCCCTGCCTCTGGGCTGCCGTCTCGCCCCTGTCCTCGCTAACGCCCCTCGTACAGCTTACGA CGTGCACCTGTGGACCATTCCCGTCGAGTTCCGGTGCTCCCTCTACCTGTTCCTCGTCATCCTCGGCACCGCCCG CCTGCAGGCCAAGCTCCGCGTCCTCACCGTCGGCGGTGTCATGTGGTTCGCCTACCGCCACTCCCGCTGGGACTT CCTCCTCTTCCTCGGCGGCATGGTCCTTGCCGAGTGGGATCTCGCCCGGGACGCCCACGCCAGCCCTCCCGCCTT GCCCCAGGACGAGAAGACGGTCGAGAGGCCGGCCCAGCCGCTGTGGAAGAGGCTTTTCTGGATCTCGGTCAGCAT CCTCGGCCTCTACCTCCTCTGCCAGCCCGACGACGGGGGCGACGTGACGCCCGGGTGGCGCTTCCTGACGTCGAT GATCCCGTCGTGGTGGGCTGAGGAGTCGTACCGATACTGGCAGTCGGCCGGCGCCGTCGTCTTCGTGGCCGCCGT CGGGCACACGGGCGGCTGGCAGCACTTCTTCAACCTGCCCGCGATACAATACCTCGGCAAGATCTCGTACGCCCT GTACCTCATGCACGGGCCTGCCATGCACACGGTCGGCTATCACTTCGAGAAGTGGGCGTACAGCCTGACGGGTGT GGACGGCTACTGGTACAATGCGGGCTTCGCGCTGGGCGCTTGCTTCTGCGTGCCCATCACCATCTGGTGGGCCGA CGTGTTCTGGAGGGCCGTCGACGTGCCGTCGGTCAAGTTTGCCAAGTGGGTGGAGCGGAGGTGTGTGGGCAAGAA CTGA |