© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9570 |
| Gene name | |
| Location | Contig_701:11205..13599 |
| Strand | + |
| Gene length (bp) | 2394 |
| Transcript length (bp) | 1746 |
| Coding sequence length (bp) | 1746 |
| Protein length (aa) | 582 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 2.0E-06 | 25 | 64 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P08638|LEUR_YEAST | Regulatory protein LEU3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEU3 PE=1 SV=1 | 21 | 576 | 3.0E-24 |
| sp|Q59UY7|SEF1_CANAL | Transcriptional regulatory protein SEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEF1 PE=1 SV=1 | 24 | 361 | 7.0E-21 |
| sp|Q74Z37|SEF1_ASHGO | Putative transcription factor SEF1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEF1 PE=3 SV=1 | 182 | 507 | 3.0E-13 |
| sp|P87164|SEF1_KLULA | Putative transcription factor SEF1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEF1 PE=3 SV=3 | 24 | 356 | 4.0E-13 |
| sp|P34228|SEF1_YEAST | Putative transcription factor SEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEF1 PE=1 SV=4 | 182 | 368 | 7.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0008150 | biological_process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0005488 | binding | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0043169 | cation binding | No |
| GO:0065007 | biological regulation | No |
| GO:0043167 | ion binding | No |
| GO:0046872 | metal ion binding | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0080090 | regulation of primary metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 31 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9570 MESSPQLADAAAAPGNDDRTRRNVACVNCRNSKVRCKASRISGQPCQRCAKLLISCVVDKSHKRVTKRSKLEQLE RELQSIKQAFKPSTDGSSIRTPPSPRANYAALPELAPAPTPTPSSAPAPAPAPAPAPAAAPASVPAAGLPPPPQV PTPRPDPPAIGLGLSDQSTRQDVRKRPTESRMLGNLAVSGADVDWYFHKFLQCYHPFVPILRKKDPNECYESNPT LFWVILYVACRRYPRDGIIFSALIEHVGRDIWPMMSAPAISLESIHALLLLCTWPLPSIRFVTDPSSTLAGIAMN SAKMLGCHVGRGSHPHFAVGVRQHLVSSDEEASSTWLACCMLAQRTASCIGISPPSIQLSDEGPKKALQSQEFQD LLAMYEIQRFLNRFHAAMAVQIGAAGGVSDTVVAMWEADLESLAPLLVRHDSDLARFGQLAARLEVQTHYMIAPP GAAGSVRRHAVRAFNTSRALIGLSTELEPHTGFLTHAPQWMLRSNVDAAAVIVATLHSSAAPELGAAEADGLVQR ACTAMLRCSVRDADLPHRASVMMETFWSVRHLVPSLGAAPSAWPERLGAGGPGHHS* |
| Coding | >Hirsu2|9570 ATGGAGTCGTCACCTCAGTTGGCGGACGCCGCGGCGGCGCCCGGGAACGACGATCGGACCAGACGCAACGTAGCA TGCGTCAACTGCCGCAACTCCAAAGTGCGGTGCAAGGCGAGCCGGATCTCTGGACAGCCGTGCCAACGCTGCGCC AAGCTGCTCATCTCCTGTGTCGTTGACAAGTCTCACAAGAGAGTGACGAAGCGAAGCAAATTGGAGCAGCTCGAG CGGGAACTGCAGAGCATTAAACAAGCTTTCAAGCCATCAACGGACGGTTCGTCCATCAGGACGCCTCCAAGCCCC CGTGCCAACTACGCCGCTCTCCCCGAGCTGGCTCCGGCCCCGACCCCGACTCCAAGCTCGGCTCCGGCTCCGGCC CCGGCTCCGGCCCCGGCCCCGGCTGCGGCTCCGGCTTCGGTTCCGGCCGCCGGACTGCCGCCTCCACCTCAGGTG CCAACACCCCGTCCGGATCCGCCCGCGATTGGCCTCGGACTCTCCGACCAGAGCACCCGTCAGGATGTCAGGAAG AGGCCGACCGAGTCGCGAATGCTGGGCAATCTTGCCGTGTCCGGTGCAGACGTCGACTGGTACTTCCACAAATTT CTGCAGTGCTATCACCCCTTTGTGCCGATTCTCCGCAAAAAGGACCCCAATGAATGCTACGAGTCGAACCCTACC CTGTTCTGGGTCATACTCTACGTCGCCTGCCGTCGATATCCCCGAGACGGCATCATCTTCTCCGCGCTTATCGAA CACGTCGGCAGGGACATATGGCCCATGATGTCGGCCCCTGCCATAAGCCTCGAGAGCATCCATGCGCTGCTGCTC CTCTGCACGTGGCCTCTGCCGAGCATCCGCTTTGTGACCGACCCGTCCTCGACGCTTGCTGGCATCGCCATGAAC TCGGCCAAGATGCTGGGCTGCCATGTCGGCCGCGGATCGCATCCCCACTTCGCCGTGGGTGTACGCCAGCATCTC GTCTCGTCGGACGAGGAAGCTTCCTCCACCTGGTTGGCATGCTGCATGCTCGCACAGCGGACGGCGTCGTGCATA GGGATCTCGCCCCCGTCGATACAGCTGAGCGACGAAGGCCCCAAGAAGGCCCTGCAGTCTCAGGAGTTCCAAGAT TTGCTCGCCATGTACGAGATACAGCGGTTCCTCAACCGCTTCCACGCCGCAATGGCCGTGCAGATCGGGGCAGCC GGCGGCGTCTCGGATACCGTCGTCGCCATGTGGGAGGCTGATCTCGAGTCCCTCGCACCGCTCCTCGTCCGCCAC GACTCGGATCTAGCGCGCTTCGGGCAGCTGGCGGCGCGGCTCGAGGTGCAGACGCACTACATGATCGCGCCGCCG GGGGCCGCGGGCTCGGTGCGGCGGCACGCCGTGCGCGCCTTCAACACGTCCCGCGCCCTCATCGGCCTCTCGACC GAGCTCGAGCCGCACACGGGCTTCCTGACACACGCGCCGCAGTGGATGCTCCGCAGCAACGTCGACGCGGCGGCC GTCATCGTGGCGACACTGCACTCGTCGGCGGCGCCGGAGCTCGGGGCGGCCGAGGCCGACGGCCTCGTCCAGCGG GCCTGCACCGCCATGCTGCGCTGCTCCGTCCGCGACGCGGACCTGCCGCACCGCGCCAGCGTCATGATGGAGACG TTCTGGTCGGTGCGCCACCTCGTCCCGTCCCTGGGCGCGGCCCCGTCGGCGTGGCCGGAACGGCTGGGCGCCGGC GGCCCTGGACATCATTCGTGA |
| Transcript | >Hirsu2|9570 ATGGAGTCGTCACCTCAGTTGGCGGACGCCGCGGCGGCGCCCGGGAACGACGATCGGACCAGACGCAACGTAGCA TGCGTCAACTGCCGCAACTCCAAAGTGCGGTGCAAGGCGAGCCGGATCTCTGGACAGCCGTGCCAACGCTGCGCC AAGCTGCTCATCTCCTGTGTCGTTGACAAGTCTCACAAGAGAGTGACGAAGCGAAGCAAATTGGAGCAGCTCGAG CGGGAACTGCAGAGCATTAAACAAGCTTTCAAGCCATCAACGGACGGTTCGTCCATCAGGACGCCTCCAAGCCCC CGTGCCAACTACGCCGCTCTCCCCGAGCTGGCTCCGGCCCCGACCCCGACTCCAAGCTCGGCTCCGGCTCCGGCC CCGGCTCCGGCCCCGGCCCCGGCTGCGGCTCCGGCTTCGGTTCCGGCCGCCGGACTGCCGCCTCCACCTCAGGTG CCAACACCCCGTCCGGATCCGCCCGCGATTGGCCTCGGACTCTCCGACCAGAGCACCCGTCAGGATGTCAGGAAG AGGCCGACCGAGTCGCGAATGCTGGGCAATCTTGCCGTGTCCGGTGCAGACGTCGACTGGTACTTCCACAAATTT CTGCAGTGCTATCACCCCTTTGTGCCGATTCTCCGCAAAAAGGACCCCAATGAATGCTACGAGTCGAACCCTACC CTGTTCTGGGTCATACTCTACGTCGCCTGCCGTCGATATCCCCGAGACGGCATCATCTTCTCCGCGCTTATCGAA CACGTCGGCAGGGACATATGGCCCATGATGTCGGCCCCTGCCATAAGCCTCGAGAGCATCCATGCGCTGCTGCTC CTCTGCACGTGGCCTCTGCCGAGCATCCGCTTTGTGACCGACCCGTCCTCGACGCTTGCTGGCATCGCCATGAAC TCGGCCAAGATGCTGGGCTGCCATGTCGGCCGCGGATCGCATCCCCACTTCGCCGTGGGTGTACGCCAGCATCTC GTCTCGTCGGACGAGGAAGCTTCCTCCACCTGGTTGGCATGCTGCATGCTCGCACAGCGGACGGCGTCGTGCATA GGGATCTCGCCCCCGTCGATACAGCTGAGCGACGAAGGCCCCAAGAAGGCCCTGCAGTCTCAGGAGTTCCAAGAT TTGCTCGCCATGTACGAGATACAGCGGTTCCTCAACCGCTTCCACGCCGCAATGGCCGTGCAGATCGGGGCAGCC GGCGGCGTCTCGGATACCGTCGTCGCCATGTGGGAGGCTGATCTCGAGTCCCTCGCACCGCTCCTCGTCCGCCAC GACTCGGATCTAGCGCGCTTCGGGCAGCTGGCGGCGCGGCTCGAGGTGCAGACGCACTACATGATCGCGCCGCCG GGGGCCGCGGGCTCGGTGCGGCGGCACGCCGTGCGCGCCTTCAACACGTCCCGCGCCCTCATCGGCCTCTCGACC GAGCTCGAGCCGCACACGGGCTTCCTGACACACGCGCCGCAGTGGATGCTCCGCAGCAACGTCGACGCGGCGGCC GTCATCGTGGCGACACTGCACTCGTCGGCGGCGCCGGAGCTCGGGGCGGCCGAGGCCGACGGCCTCGTCCAGCGG GCCTGCACCGCCATGCTGCGCTGCTCCGTCCGCGACGCGGACCTGCCGCACCGCGCCAGCGTCATGATGGAGACG TTCTGGTCGGTGCGCCACCTCGTCCCGTCCCTGGGCGCGGCCCCGTCGGCGTGGCCGGAACGGCTGGGCGCCGGC GGCCCTGGACATCATTCGTGA |
| Gene | >Hirsu2|9570 ATGGAGTCGTCACCTCAGTTGGCGGACGCCGCGGCGGCGCCCGGGAACGACGATCGGACCAGACGCAACGTAGCA TGCGTCAACTGCCGCAACTCCAAAGTGAGAAAGGATGCCCACTGAGCGAGAGCGGGAGGCCGTCACGGCGTCGCT GAACAACCGTTGACGGACGTACGAGCAGGTGCGGTGCAAGGCGAGCCGGATCTCTGGACAGCCGTGCCAACGCTG CGCCAAGCTGCTCATCTCCTGTGTCGTTGACAAGTCTCACAAGAGAGTGACGAAGCGAAGGTGGGCGAAATGGTT TCCCTCGACCTCCCCCAGCACTTACATCTCTCCTTGCCCCCATTTCCGGTCCATCCGCACCCGCCCCCCTTGCTA GGCGTCCACAAGAGAGTGCACGTCATTGCCCGCTTCAGCCTTTCCATGCCGTTTGCTTGACCAGATGATCGCCCT GGCCCGTCAGAACTGAGCTCGCTCTGACACGTTTCTTTGTCCTGTCTCTTCAGCAAATTGGAGCAGCTCGAGCGG GAACTGCAGAGCATTAAACAAGCTTTCAAGCCATCAACGGACGGTTCGTCCATCAGGACGCCTCCAAGCCCCCGT GCCAACTACGCCGCTCTCCCCGAGCTGGCTCCGGCCCCGACCCCGACTCCAAGCTCGGCTCCGGCTCCGGCCCCG GCTCCGGCCCCGGCCCCGGCTGCGGCTCCGGCTTCGGTTCCGGCCGCCGGACTGCCGCCTCCACCTCAGGTGCCA ACACCCCGTCCGGATCCGCCCGCGATTGGCCTCGGACTCTCCGACCAGAGCACCCGTCAGGATGTCAGGAAGAGG CCGACCGAGTCGCGAATGCTGGGCAATCTTGCCGTGTCCGGTGCAGACGTCGACTGGTACTTCCACAAGTCTGTC GCCTTTCTTGTCTCCTCGCATTCCGGACGTTGCTTTCCGCCTTGACGCTGACCTCGACCCTCCCCCCCTTCCTTC TCCTGCACTCTCCCGACATCACAGATTTCTGCAGTGCTATCACCCCTTTGTGCCGATTCTCCGCAAAAAGGACCC CAATGAATGCTACGAGTCGAACCCTACCCTGTTCTGGGTCATACTCTACGTCGCCTGCCGTCGATATCCCCGAGA CGGCATCATCTTCTCCGCGCTTATCGAACACGTCGGCAGGGACATATGGCCCATGATGTCGGCCCCTGCCATAAG CCTCGAGAGCATCCATGCGCTGCTGCTCCTCTGCACGTGGCCTCTGCCGAGCATCCGCTTTGTGACCGACCCGTC CTCGACGCTTGCTGGCATCGCCATGAACTCGGCCAAGATGCTGGGCTGCCATGTCGGCCGCGGATCGCATCCCCA CTTCGCCGTGGGTGTACGCCAGCATCTCGTCTCGTCGGACGAGGAAGCTTCCTCCACCTGGTTGGCATGCTGCAT GCTCGCACAGCGGTGAGTGGGCAAACAGCCAGAGCTGGCCCGGCTCGGATGCCGCCGGGAACTGAACACGCCACA GGACGGCGTCGTGCATAGGGATCTCGCCCCCGTCGATACAGCTGAGCGACGAAGGCCCCAAGAAGGCCCTGCAGT CTCAGGAGTTCCAAGATTTGCTCGCCATGTACGAGATACAGCGGTTCCTCAACCGCTTCCACGCCGCAATGGCCG TGCAGATCGGGGCAGCCGGCGGCGTCTCGGATACCGTCGTCGCCATGTGGGAGGCTGATCTCGAGTCCCTCGCAC CGCTCCTCGTCCGCCACGACTCGGGTACGCCGCGCGTGAGCCCTCACCTCGGGTCGCAAGACCGCTCTGCGGATG GCTCTTCGGAAGTGCTCTCTCGGCTGACTGGCGCAACCGGCGTGCGGAACAAGCAGATCTAGCGCGCTTCGGGCA GCTGGCGGCGCGGCTCGAGGTGCAGACGCACTACATGATCGCGCCGCCGGGGGCCGCGGGCTCGGTGCGGCGGCA CGCCGTGCGCGCCTTCAACACGTCCCGCGCCCTCATCGGCCTCTCGACCGAGCTCGAGCCGCACACGGGCTTCCT GACACACGCGCCGCAGTGGATGCTCCGCAGCAACGTCGACGCGGCGGCCGTCATCGTGGCGACACTGCACTCGTC GGCGGCGCCGGAGCTCGGGGCGGCCGAGGCCGACGGCCTCGTCCAGCGGGCCTGCACCGCCATGCTGCGCTGCTC CGTCCGCGACGCGGACCTGCCGCACCGCGCCAGCGTCATGATGGAGACGTTCTGGTCGGTGCGCCACCTCGTCCC GTCCCTGGGCGCGGCCCCGTCGGCGTGGCCGGAACGGCTGGGCGCCGGCGTCACCTACTGGTGCCTCGAGAGGTT CCGCAACGGGCTCAAGGCGGCGCAGGGGAGCACCGAAAGGGTCGACAGGGCCCTGGACATCATTCGTGA |