Protein ID | Hirsu2|9552 |
Gene name | |
Location | Contig_70:8288..9515 |
Strand | + |
Gene length (bp) | 1227 |
Transcript length (bp) | 1227 |
Coding sequence length (bp) | 1227 |
Protein length (aa) | 409 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1628 | 0.0921 | 0.9461 | 0.1528 | 0.0625 | 0.0344 | 0.1077 | 0.2808 | 0.1979 | 0.0066 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999336 |
Orthofinder run ID | 4 |
Orthogroup | 95 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9552 MRLRAFTLVALTCSAWALDADLLRKKYTDSLQKQARIDWSNPPKYELKVTERTCMPFWSFYSIWTDFLTRQTLLR PSDGTNVSITVGCDIIPQLRFLNLNNKDTPIQAEEGTWITDGITEGWNAGAALNAKVVTVSGGYDRHWHKSTMKV KSLGISESCPPYHECRFETWSYNINYVGQCQREAIIHAFTELNICDQLSRLDDLPFGLWVATRHTTDQPSFEERL EACPQFTNWGRKQCQDPDGPQYGTKPQGECKLQLPIMDGASGERLYTLVFVKENYGSEDVADAPTNAEAPIATRA DDVHHCVFMLNTGQWYDSVSGGYFDKSTEDWESKPDAPTPIIPDELRPSDCPSSTDKTGGDRRRGSMSSNIKVAK KGIHASKTLGKRDSPQRRKGKVEIKVVAGFQGF* |
Coding | >Hirsu2|9552 ATGAGGCTCAGAGCATTCACCCTAGTTGCCTTGACCTGCAGCGCATGGGCGCTCGACGCCGACCTTCTTAGGAAG AAGTACACAGACTCGTTACAGAAACAGGCACGAATCGACTGGAGTAATCCTCCTAAATATGAGCTTAAAGTGACG GAGAGGACCTGTATGCCGTTTTGGAGTTTTTACAGCATCTGGACGGATTTCCTGACCCGCCAGACGCTACTGCGG CCGTCTGACGGCACCAATGTCAGCATCACCGTCGGTTGCGACATTATCCCCCAGTTGCGGTTTCTCAACCTCAAC AATAAAGACACCCCGATACAAGCGGAGGAGGGCACGTGGATTACAGACGGGATTACGGAGGGCTGGAATGCTGGA GCAGCGCTGAACGCCAAGGTGGTTACCGTCTCGGGTGGGTATGACCGACACTGGCACAAGTCGACTATGAAGGTA AAATCGCTGGGGATATCGGAATCTTGCCCGCCTTACCATGAGTGCCGATTTGAGACTTGGTCTTATAATATCAAC TACGTCGGACAATGCCAGCGCGAGGCAATCATCCACGCCTTTACGGAACTGAACATTTGCGACCAGCTCTCCCGT CTTGACGACCTTCCATTTGGGCTGTGGGTCGCAACAAGGCATACAACGGACCAACCGAGCTTTGAAGAACGGTTA GAAGCTTGTCCACAGTTCACGAATTGGGGTCGGAAACAGTGTCAGGATCCGGATGGACCTCAATATGGGACAAAG CCACAGGGAGAGTGCAAGCTACAACTCCCAATCATGGACGGGGCTTCTGGGGAGCGACTTTATACCCTTGTCTTT GTGAAGGAAAACTACGGCAGCGAAGATGTCGCGGACGCCCCGACAAACGCAGAAGCCCCGATTGCCACGAGGGCA GATGATGTCCACCACTGCGTCTTCATGCTCAACACAGGGCAGTGGTATGATTCAGTCTCTGGCGGATATTTTGAT AAAAGCACCGAGGACTGGGAATCCAAGCCAGATGCCCCCACGCCCATCATCCCCGACGAGCTGCGCCCTTCCGAC TGTCCGTCTAGCACGGACAAGACGGGAGGGGACAGAAGAAGGGGAAGTATGTCTTCAAACATAAAAGTAGCCAAG AAAGGTATACACGCGTCCAAGACTCTTGGAAAGAGAGACAGCCCCCAGCGACGCAAAGGCAAGGTTGAGATCAAG GTCGTCGCTGGTTTTCAAGGGTTTTGA |
Transcript | >Hirsu2|9552 ATGAGGCTCAGAGCATTCACCCTAGTTGCCTTGACCTGCAGCGCATGGGCGCTCGACGCCGACCTTCTTAGGAAG AAGTACACAGACTCGTTACAGAAACAGGCACGAATCGACTGGAGTAATCCTCCTAAATATGAGCTTAAAGTGACG GAGAGGACCTGTATGCCGTTTTGGAGTTTTTACAGCATCTGGACGGATTTCCTGACCCGCCAGACGCTACTGCGG CCGTCTGACGGCACCAATGTCAGCATCACCGTCGGTTGCGACATTATCCCCCAGTTGCGGTTTCTCAACCTCAAC AATAAAGACACCCCGATACAAGCGGAGGAGGGCACGTGGATTACAGACGGGATTACGGAGGGCTGGAATGCTGGA GCAGCGCTGAACGCCAAGGTGGTTACCGTCTCGGGTGGGTATGACCGACACTGGCACAAGTCGACTATGAAGGTA AAATCGCTGGGGATATCGGAATCTTGCCCGCCTTACCATGAGTGCCGATTTGAGACTTGGTCTTATAATATCAAC TACGTCGGACAATGCCAGCGCGAGGCAATCATCCACGCCTTTACGGAACTGAACATTTGCGACCAGCTCTCCCGT CTTGACGACCTTCCATTTGGGCTGTGGGTCGCAACAAGGCATACAACGGACCAACCGAGCTTTGAAGAACGGTTA GAAGCTTGTCCACAGTTCACGAATTGGGGTCGGAAACAGTGTCAGGATCCGGATGGACCTCAATATGGGACAAAG CCACAGGGAGAGTGCAAGCTACAACTCCCAATCATGGACGGGGCTTCTGGGGAGCGACTTTATACCCTTGTCTTT GTGAAGGAAAACTACGGCAGCGAAGATGTCGCGGACGCCCCGACAAACGCAGAAGCCCCGATTGCCACGAGGGCA GATGATGTCCACCACTGCGTCTTCATGCTCAACACAGGGCAGTGGTATGATTCAGTCTCTGGCGGATATTTTGAT AAAAGCACCGAGGACTGGGAATCCAAGCCAGATGCCCCCACGCCCATCATCCCCGACGAGCTGCGCCCTTCCGAC TGTCCGTCTAGCACGGACAAGACGGGAGGGGACAGAAGAAGGGGAAGTATGTCTTCAAACATAAAAGTAGCCAAG AAAGGTATACACGCGTCCAAGACTCTTGGAAAGAGAGACAGCCCCCAGCGACGCAAAGGCAAGGTTGAGATCAAG GTCGTCGCTGGTTTTCAAGGGTTTTGA |
Gene | >Hirsu2|9552 ATGAGGCTCAGAGCATTCACCCTAGTTGCCTTGACCTGCAGCGCATGGGCGCTCGACGCCGACCTTCTTAGGAAG AAGTACACAGACTCGTTACAGAAACAGGCACGAATCGACTGGAGTAATCCTCCTAAATATGAGCTTAAAGTGACG GAGAGGACCTGTATGCCGTTTTGGAGTTTTTACAGCATCTGGACGGATTTCCTGACCCGCCAGACGCTACTGCGG CCGTCTGACGGCACCAATGTCAGCATCACCGTCGGTTGCGACATTATCCCCCAGTTGCGGTTTCTCAACCTCAAC AATAAAGACACCCCGATACAAGCGGAGGAGGGCACGTGGATTACAGACGGGATTACGGAGGGCTGGAATGCTGGA GCAGCGCTGAACGCCAAGGTGGTTACCGTCTCGGGTGGGTATGACCGACACTGGCACAAGTCGACTATGAAGGTA AAATCGCTGGGGATATCGGAATCTTGCCCGCCTTACCATGAGTGCCGATTTGAGACTTGGTCTTATAATATCAAC TACGTCGGACAATGCCAGCGCGAGGCAATCATCCACGCCTTTACGGAACTGAACATTTGCGACCAGCTCTCCCGT CTTGACGACCTTCCATTTGGGCTGTGGGTCGCAACAAGGCATACAACGGACCAACCGAGCTTTGAAGAACGGTTA GAAGCTTGTCCACAGTTCACGAATTGGGGTCGGAAACAGTGTCAGGATCCGGATGGACCTCAATATGGGACAAAG CCACAGGGAGAGTGCAAGCTACAACTCCCAATCATGGACGGGGCTTCTGGGGAGCGACTTTATACCCTTGTCTTT GTGAAGGAAAACTACGGCAGCGAAGATGTCGCGGACGCCCCGACAAACGCAGAAGCCCCGATTGCCACGAGGGCA GATGATGTCCACCACTGCGTCTTCATGCTCAACACAGGGCAGTGGTATGATTCAGTCTCTGGCGGATATTTTGAT AAAAGCACCGAGGACTGGGAATCCAAGCCAGATGCCCCCACGCCCATCATCCCCGACGAGCTGCGCCCTTCCGAC TGTCCGTCTAGCACGGACAAGACGGGAGGGGACAGAAGAAGGGGAAGTATGTCTTCAAACATAAAAGTAGCCAAG AAAGGTATACACGCGTCCAAGACTCTTGGAAAGAGAGACAGCCCCCAGCGACGCAAAGGCAAGGTTGAGATCAAG GTCGTCGCTGGTTTTCAAGGGTTTTGA |