© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|9541 |
| Gene name | |
| Location | Contig_7:68287..68800 |
| Strand | + |
| Gene length (bp) | 513 |
| Transcript length (bp) | 270 |
| Coding sequence length (bp) | 270 |
| Protein length (aa) | 90 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08520 | DUF1748 | Fungal protein of unknown function (DUF1748) | 1.4E-31 | 15 | 87 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q2V2P4|YI156_YEAST | Uncharacterized protein YIL156W-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL156W-B PE=3 SV=1 | 15 | 87 | 6.0E-16 |
| sp|Q10167|YAUE_SCHPO | Uncharacterized protein C26A3.14c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26A3.14c PE=4 SV=1 | 15 | 87 | 2.0E-12 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.2721 | 0.2434 | 0.4105 | 0.1412 | 0.6466 | 0.3711 | 0.478 | 0.3918 | 0.3615 | 0.2115 |
| Orthofinder run ID | 4 |
| Orthogroup | 5775 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9541 MVLLNLLTLGLWSKVGRLTHYAFDAVLISAFLAGMKRSTGLTPSFKTDKVAGENKEVSRWIDKYLGVGEWVMDQS VAIAGSSGFFERTR* |
| Coding | >Hirsu2|9541 ATGGTGTTACTCAACCTGCTGACGCTGGGCCTTTGGTCAAAGGTTGGACGTCTTACGCACTACGCTTTCGATGCC GTCCTCATCTCTGCCTTTCTCGCTGGCATGAAGCGTTCGACCGGATTGACGCCTAGTTTCAAGACGGATAAGGTT GCCGGCGAGAACAAGGAGGTTTCGAGGTGGATCGACAAGTATCTCGGTGTCGGCGAGTGGGTCATGGATCAATCA GTCGCCATCGCGGGCTCCAGCGGCTTTTTCGAACGGACACGATAA |
| Transcript | >Hirsu2|9541 ATGGTGTTACTCAACCTGCTGACGCTGGGCCTTTGGTCAAAGGTTGGACGTCTTACGCACTACGCTTTCGATGCC GTCCTCATCTCTGCCTTTCTCGCTGGCATGAAGCGTTCGACCGGATTGACGCCTAGTTTCAAGACGGATAAGGTT GCCGGCGAGAACAAGGAGGTTTCGAGGTGGATCGACAAGTATCTCGGTGTCGGCGAGTGGGTCATGGATCAATCA GTCGCCATCGCGGGCTCCAGCGGCTTTTTCGAACGGACACGATAA |
| Gene | >Hirsu2|9541 ATGGTGGTAAGCATCTACGCCGCCCCAAACCGCTCATCGTCAGCCGCTCCGGCTCGTCGCGGCCCCTCTAAGAAA CCTCGCAGTTACTCAACCTGCTGACGCTGGGCCTTTGGTCAAAGGTTGGACGTCTTACGCACTACGCTTTCGATG CCGTCCTCAGTCCGTCTCCGTGCTTTCCCACTTGACTCCTCGTTCGCCGAATGTCTCGCTGACGCCGTGTGCCCC AATCCAGTCTCTGCCTTTCTCGCTGGCATGAAGCGTTCGACCGGATTGACGTGAGTCGCTCCCATCGTGCCTGCC CCTCTCCCGGTCGTCTTCACCCATGCGCAGACACGTCTCTAACTCGCGCCCTGCCACGGCATTCCTAGGCCTAGT TTCAAGACGGATAAGGTTGCCGGCGAGAACAAGGAGGTTTCGAGGTGGATCGACAAGTATCTCGGTGTCGGCGAG TGGGTCATGGATCAATCAGTCGCCATCGCGGGCTCCAGCGGCTTTTTCGAACGGACACGATAA |