Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9523
Gene name
Location	Contig_7:16056..16868
Strand	+
Gene length (bp)	812
Transcript length (bp)	714
Coding sequence length (bp)	714
Protein length (aa)	238

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00383	dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	5.6E-09	44	162

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O34598\|GUAD_BACSU	Guanine deaminase OS=Bacillus subtilis (strain 168) GN=guaD PE=1 SV=1	68	154	1.0E-06

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Extracellular	Signal peptide	0.2637	0.1379	0.6089	0.0566	0.1761	0.1311	0.3873	0.273	0.1188	0.0985

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 20	0.924771

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	10941
Change Orthofinder run

Species	Protein ID
Ophiocordyceps subramaniannii	Hirsu2\|9523 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9523 MEPRSMLWGLVGTALAAAAGQPDGQQAGLGAAETTANGVPLSTRAYWMRRANQALAEVLGTPCPFEAFGAVIVNH SAGGLGEAVCIGANMRSLTGDHTMHGEVAAMRNCSAILTDPAGAHRLTPAAALAAFSDLSLYTTGESCPMCASAV AWARFGEYVYGTSVAAMVRLGWRHVRMSSRDVLRLAFDFDGAPPVGAIVPDVLANETDPFLAWQYDRAAPCPGGC VRAGGSCAVPVG*
Coding	>Hirsu2\|9523 ATGGAGCCGCGCAGCATGCTCTGGGGCCTGGTCGGGACGGCACTCGCTGCGGCAGCCGGGCAGCCCGACGGGCAG CAGGCCGGGCTCGGGGCGGCGGAGACGACGGCGAACGGGGTGCCGCTCAGCACGCGGGCGTACTGGATGCGCAGG GCGAACCAGGCCTTGGCCGAGGTGCTGGGGACGCCGTGCCCGTTCGAGGCGTTTGGGGCCGTCATCGTCAACCAC TCGGCGGGCGGGCTGGGCGAGGCCGTGTGCATCGGGGCCAACATGCGGTCTCTGACGGGAGACCACACGATGCAC GGCGAGGTGGCGGCGATGCGCAACTGCAGCGCCATCCTGACAGACCCGGCGGGCGCGCACCGGCTGACGCCGGCG GCGGCGCTGGCGGCCTTTTCGGACCTGTCGCTCTACACCACCGGTGAGAGCTGCCCGATGTGCGCGTCGGCCGTG GCGTGGGCGCGCTTCGGTGAGTACGTGTACGGGACGAGCGTGGCGGCCATGGTGCGCCTGGGCTGGCGCCACGTG CGCATGTCGTCGCGCGACGTGCTCCGCCTCGCCTTCGACTTCGACGGCGCGCCACCCGTCGGTGCCATCGTGCCC GACGTGCTGGCCAACGAGACGGACCCGTTCCTCGCGTGGCAGTACGACCGGGCCGCGCCGTGCCCCGGCGGCTGC GTCCGCGCGGGGGGGTCCTGCGCCGTGCCGGTCGGCTGA
Transcript	>Hirsu2\|9523 ATGGAGCCGCGCAGCATGCTCTGGGGCCTGGTCGGGACGGCACTCGCTGCGGCAGCCGGGCAGCCCGACGGGCAG CAGGCCGGGCTCGGGGCGGCGGAGACGACGGCGAACGGGGTGCCGCTCAGCACGCGGGCGTACTGGATGCGCAGG GCGAACCAGGCCTTGGCCGAGGTGCTGGGGACGCCGTGCCCGTTCGAGGCGTTTGGGGCCGTCATCGTCAACCAC TCGGCGGGCGGGCTGGGCGAGGCCGTGTGCATCGGGGCCAACATGCGGTCTCTGACGGGAGACCACACGATGCAC GGCGAGGTGGCGGCGATGCGCAACTGCAGCGCCATCCTGACAGACCCGGCGGGCGCGCACCGGCTGACGCCGGCG GCGGCGCTGGCGGCCTTTTCGGACCTGTCGCTCTACACCACCGGTGAGAGCTGCCCGATGTGCGCGTCGGCCGTG GCGTGGGCGCGCTTCGGTGAGTACGTGTACGGGACGAGCGTGGCGGCCATGGTGCGCCTGGGCTGGCGCCACGTG CGCATGTCGTCGCGCGACGTGCTCCGCCTCGCCTTCGACTTCGACGGCGCGCCACCCGTCGGTGCCATCGTGCCC GACGTGCTGGCCAACGAGACGGACCCGTTCCTCGCGTGGCAGTACGACCGGGCCGCGCCGTGCCCCGGCGGCTGC GTCCGCGCGGGGGGGTCCTGCGCCGTGCCGGTCGGCTGA
Gene	>Hirsu2\|9523 ATGGAGCCGCGCAGCATGCTCTGGGGCCTGGTCGGGACGGCACTCGCTGCGGCAGCCGGGCAGCCCGACGGGCAG CAGGCCGGGCTCGGGGCGGCGGAGACGACGGCGAACGGGGTGCCGCTCAGCACGCGGGCGTACTGGATGCGCAGG GCGAACCAGGCCTTGGCCGAGGTGCTGGGGACGCCGTGCCCGTTCGAGGCGTTTGGGGCCGTCATCGTCAACCAC TCGGCGGGCGGGCTGGGCGAGGCCGTGTGCATCGGGGCCAACATGCGGTCTCTGACGGGAGACCACACGATGCAC GGTTCGTGTCCTTTTCTTTTTTTTTCTCTTTTTTTTGTTCCCCTCCCTCATGGAGGATGCCGTGTCCGATATGGC ATTATTCTCACCCGCAGAGGGCAGGCGAGGTGGCGGCGATGCGCAACTGCAGCGCCATCCTGACAGACCCGGCGG GCGCGCACCGGCTGACGCCGGCGGCGGCGCTGGCGGCCTTTTCGGACCTGTCGCTCTACACCACCGGTGAGAGCT GCCCGATGTGCGCGTCGGCCGTGGCGTGGGCGCGCTTCGGTGAGTACGTGTACGGGACGAGCGTGGCGGCCATGG TGCGCCTGGGCTGGCGCCACGTGCGCATGTCGTCGCGCGACGTGCTCCGCCTCGCCTTCGACTTCGACGGCGCGC CACCCGTCGGTGCCATCGTGCCCGACGTGCTGGCCAACGAGACGGACCCGTTCCTCGCGTGGCAGTACGACCGGG CCGCGCCGTGCCCCGGCGGCTGCGTCCGCGCGGGGGGGTCCTGCGCCGTGCCGGTCGGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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