Protein ID | Hirsu2|9518 |
Gene name | |
Location | Contig_7:3726..4430 |
Strand | - |
Gene length (bp) | 704 |
Transcript length (bp) | 564 |
Coding sequence length (bp) | 564 |
Protein length (aa) | 188 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Endoplasmic reticulum | 0.418 | 0.1933 | 0.4014 | 0.2489 | 0.5088 | 0.25 | 0.6545 | 0.1892 | 0.3077 | 0.3141 |
Orthofinder run ID | 4 |
Orthogroup | 296 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|9518 MWFMLPLRLLWSFGKRSPPQDGEYDVYPVYKLDDNMLCRNLSVSYTMRFNDVLDPYLLLDSLTRLLEIGDWRKLG GRLVWKEDGGLEIHVPKPFTADRPGVAFTHEDLGSVSIEQHHLGRQFPKPTDGPSTHPDGELFRSFAARRDLPST VSGLAERRTPQLSLHITSFADATLVAVCWPHTLMDGT* |
Coding | >Hirsu2|9518 ATGTGGTTCATGCTCCCGTTGCGTCTGCTCTGGTCGTTTGGCAAGCGAAGCCCACCTCAGGATGGGGAGTACGAT GTCTACCCCGTGTATAAGCTGGATGACAACATGCTGTGTCGCAACCTCTCCGTGTCGTATACGATGCGCTTCAAC GATGTTCTTGACCCGTACCTGCTGCTCGACAGTCTCACGAGGCTCCTCGAGATTGGGGACTGGAGGAAGCTTGGA GGCCGGCTCGTGTGGAAGGAAGACGGCGGCTTGGAGATCCACGTCCCGAAACCGTTCACGGCGGACCGGCCGGGG GTTGCGTTTACGCACGAGGACCTGGGCTCGGTGAGCATCGAGCAGCATCATCTGGGCAGGCAGTTTCCCAAGCCA ACGGACGGGCCGTCGACGCACCCTGACGGGGAACTCTTCCGATCGTTCGCCGCAAGGCGAGACCTGCCTAGCACG GTGAGCGGGCTTGCCGAGCGGAGAACGCCGCAGTTGTCGCTGCACATCACGTCGTTCGCCGACGCGACGCTCGTG GCCGTCTGCTGGCCTCACACCTTGATGGACGGCACGTGA |
Transcript | >Hirsu2|9518 ATGTGGTTCATGCTCCCGTTGCGTCTGCTCTGGTCGTTTGGCAAGCGAAGCCCACCTCAGGATGGGGAGTACGAT GTCTACCCCGTGTATAAGCTGGATGACAACATGCTGTGTCGCAACCTCTCCGTGTCGTATACGATGCGCTTCAAC GATGTTCTTGACCCGTACCTGCTGCTCGACAGTCTCACGAGGCTCCTCGAGATTGGGGACTGGAGGAAGCTTGGA GGCCGGCTCGTGTGGAAGGAAGACGGCGGCTTGGAGATCCACGTCCCGAAACCGTTCACGGCGGACCGGCCGGGG GTTGCGTTTACGCACGAGGACCTGGGCTCGGTGAGCATCGAGCAGCATCATCTGGGCAGGCAGTTTCCCAAGCCA ACGGACGGGCCGTCGACGCACCCTGACGGGGAACTCTTCCGATCGTTCGCCGCAAGGCGAGACCTGCCTAGCACG GTGAGCGGGCTTGCCGAGCGGAGAACGCCGCAGTTGTCGCTGCACATCACGTCGTTCGCCGACGCGACGCTCGTG GCCGTCTGCTGGCCTCACACCTTGATGGACGGCACGTGA |
Gene | >Hirsu2|9518 ATGTGGTTCATGCTCCCGTTGCGTCTGCTCTGGTCGTTTGGCAAGCGAAGCCCACCTCAGGATGGGGAGTACGAT GTCTACCCCGTGTATAAGCTGGATGACAACATGCTGTGTCGCAACCTCTCCGTGTCGTATACGATGCGCTTCAAC GATGTTCTTGACCCGTACCTGCTGCTCGACAGTCTCACGAGGCTCCTCGAGATTGGGGACTGGAGGAAGCTTGGA GGCCGGCTCGTGTGGAAGGTAAAGGACGTTGTAGAATGGTGAGAGACCCGGGGGGGCTAACGTCTGACAGGAAGA CGGCGGCTTGGAGATCCACGTCCCGAAACCGTTCACGGCGGACCGGCCGGGGGTTGCGTTTACGCACGAGGACCT GGGCTCGGTGAGCATCGAGCAGCATCATCTGGGCAGGCAGTTTCCCAAGCCAACGGACGGGCCGTCGACGCACCC TGACGGGGAACTCTTCCGATCGTTCGCCGCAAGGCGAGACCTGCCTAGCACGGTGAGCGGGCTTGCCGAGCGGAG AACGCCGCAGTTGTCGCTGCACATCACGTCGTTCGCCGACGCGACGCTCGTGGCCGTCTGCTGGCCTCACACCTT GATGGACGGCGTGAGCGCGGATATCATGTTGCGCAGCTGGTCGCTCGTCCTGGCCGGTCGGGAAGCCGAAGTTCC GCCCGTGCTGGGCGGGCGAACAGACGTGA |