© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9509 |
| Gene name | |
| Location | Contig_698:8485..8908 |
| Strand | - |
| Gene length (bp) | 423 |
| Transcript length (bp) | 423 |
| Coding sequence length (bp) | 423 |
| Protein length (aa) | 141 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular|Cell membrane | 0.1335 | 0.0616 | 0.6954 | 0.5258 | 0.0662 | 0.0155 | 0.3282 | 0.2169 | 0.3285 | 0.0057 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 27 | 0.999723 |
| Orthofinder run ID | 4 |
| Orthogroup | 10936 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|9509 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9509 MGLSPVASPPARAALLLLLLLATLVRSAADDAAGLVRRAETEGAACSPEGQWNCMTDSWQRCAAGRWSSVVKCAP GTICTPSGLIADLGVEHGGGGAPGGNDGRTGGNGRGPVSLGRPARGSASAGLLALAVLSCLAALL* |
| Coding | >Hirsu2|9509 ATGGGCTTAAGCCCCGTGGCTTCGCCGCCCGCGCGCGCGGCGCTGCTCCTCCTGCTGCTGCTCGCGACGCTCGTC CGGTCCGCCGCCGACGACGCGGCCGGCTTGGTGCGCCGGGCCGAGACCGAGGGGGCGGCCTGCTCCCCCGAGGGC CAGTGGAACTGCATGACGGACTCGTGGCAGCGGTGCGCGGCTGGCCGCTGGAGCAGCGTCGTCAAGTGCGCCCCC GGCACCATCTGCACCCCGTCCGGCCTCATCGCCGACCTCGGCGTCGAGCACGGCGGGGGCGGCGCCCCGGGGGGC AACGACGGTCGCACGGGCGGTAACGGCAGAGGCCCCGTCAGCCTTGGTCGGCCGGCTCGGGGTTCCGCAAGCGCC GGCCTGCTCGCGCTGGCCGTTCTGTCATGCCTGGCCGCCCTGCTCTGA |
| Transcript | >Hirsu2|9509 ATGGGCTTAAGCCCCGTGGCTTCGCCGCCCGCGCGCGCGGCGCTGCTCCTCCTGCTGCTGCTCGCGACGCTCGTC CGGTCCGCCGCCGACGACGCGGCCGGCTTGGTGCGCCGGGCCGAGACCGAGGGGGCGGCCTGCTCCCCCGAGGGC CAGTGGAACTGCATGACGGACTCGTGGCAGCGGTGCGCGGCTGGCCGCTGGAGCAGCGTCGTCAAGTGCGCCCCC GGCACCATCTGCACCCCGTCCGGCCTCATCGCCGACCTCGGCGTCGAGCACGGCGGGGGCGGCGCCCCGGGGGGC AACGACGGTCGCACGGGCGGTAACGGCAGAGGCCCCGTCAGCCTTGGTCGGCCGGCTCGGGGTTCCGCAAGCGCC GGCCTGCTCGCGCTGGCCGTTCTGTCATGCCTGGCCGCCCTGCTCTGA |
| Gene | >Hirsu2|9509 ATGGGCTTAAGCCCCGTGGCTTCGCCGCCCGCGCGCGCGGCGCTGCTCCTCCTGCTGCTGCTCGCGACGCTCGTC CGGTCCGCCGCCGACGACGCGGCCGGCTTGGTGCGCCGGGCCGAGACCGAGGGGGCGGCCTGCTCCCCCGAGGGC CAGTGGAACTGCATGACGGACTCGTGGCAGCGGTGCGCGGCTGGCCGCTGGAGCAGCGTCGTCAAGTGCGCCCCC GGCACCATCTGCACCCCGTCCGGCCTCATCGCCGACCTCGGCGTCGAGCACGGCGGGGGCGGCGCCCCGGGGGGC AACGACGGTCGCACGGGCGGTAACGGCAGAGGCCCCGTCAGCCTTGGTCGGCCGGCTCGGGGTTCCGCAAGCGCC GGCCTGCTCGCGCTGGCCGTTCTGTCATGCCTGGCCGCCCTGCTCTGA |