Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|950
Gene name
LocationContig_12:14702..15131
Strand-
Gene length (bp)429
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

(None)

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O59699|YN42_SCHPO Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 3 67 1.0E-14
sp|Q9Y7S4|YQO5_SCHPO Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 3 67 2.0E-14
sp|O74829|YN2F_SCHPO Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 3 67 3.0E-14
sp|O59700|YN43_SCHPO Uncharacterized transporter C36.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.03c PE=3 SV=1 3 67 1.0E-13
sp|O59698|YN41_SCHPO Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 3 69 1.0E-13
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O59699|YN42_SCHPO Uncharacterized transporter C36.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.02c PE=3 SV=1 3 67 1.0E-14
sp|Q9Y7S4|YQO5_SCHPO Uncharacterized transporter C569.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC569.05c PE=3 SV=1 3 67 2.0E-14
sp|O74829|YN2F_SCHPO Uncharacterized MFS-type transporter C530.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.15c PE=1 SV=2 3 67 3.0E-14
sp|O59700|YN43_SCHPO Uncharacterized transporter C36.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.03c PE=3 SV=1 3 67 1.0E-13
sp|O59698|YN41_SCHPO Uncharacterized transporter C36.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC36.01c PE=1 SV=1 3 69 1.0E-13
sp|P38776|YHK8_YEAST Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 2 69 9.0E-13
sp|O43081|YHS6_SCHPO Uncharacterized MFS-type transporter C947.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.06c PE=3 SV=1 2 68 1.0E-11
sp|Q07824|TPO1_YEAST Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 7 69 1.0E-10
sp|Q10487|MFS1_SCHPO Transporter mfs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs1 PE=3 SV=1 2 69 3.0E-09
sp|Q7Z9I0|YHA8_SCHPO Uncharacterized MFS-type transporter C409.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.08 PE=3 SV=1 2 67 9.0E-09
sp|Q12256|TPO4_YEAST Polyamine transporter 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO4 PE=1 SV=1 1 68 1.0E-08
sp|Q06451|TPO3_YEAST Polyamine transporter 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO3 PE=1 SV=1 2 65 1.0E-08
sp|O94528|CAF5_SCHPO Caffeine resistance protein 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=caf5 PE=3 SV=1 2 69 2.0E-08
sp|P53283|TPO2_YEAST Polyamine transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO2 PE=1 SV=1 2 65 2.0E-08
sp|P38124|FLR1_YEAST Fluconazole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLR1 PE=1 SV=1 2 69 2.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 33 55 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|950
MYAASAIAANTIARSACGAAAPLFTLQMFKAMGVGGGGSLIGGVAAVLAVIPFLFSKYGKQIRARSKFSPTKAKP
AAKEDEEELAVITAYAAYAQSMECLHVADMQATDSEEQEQWRNFSGEWPLRSGETGASGPVDSPAER*
Coding >Hirsu2|950
ATGTACGCAGCCTCCGCGATAGCCGCGAACACCATCGCCCGCTCAGCCTGTGGCGCTGCCGCGCCGCTCTTCACT
CTGCAGATGTTCAAGGCTATGGGTGTTGGCGGCGGCGGGAGCTTGATCGGTGGGGTCGCCGCCGTTCTAGCCGTC
ATTCCTTTTCTCTTTTCTAAATACGGCAAGCAAATCAGAGCGCGGAGCAAGTTTTCCCCCACGAAGGCGAAGCCG
GCCGCGAAAGAAGACGAGGAAGAGTTGGCTGTCATAACGGCATATGCGGCTTACGCGCAGTCCATGGAATGTCTT
CATGTTGCCGACATGCAAGCGACAGACTCTGAAGAGCAAGAGCAATGGCGAAACTTCAGTGGTGAATGGCCTTTG
AGGAGCGGAGAGACTGGCGCTTCAGGACCTGTGGACTCACCGGCGGAGAGGTGA
Transcript >Hirsu2|950
ATGTACGCAGCCTCCGCGATAGCCGCGAACACCATCGCCCGCTCAGCCTGTGGCGCTGCCGCGCCGCTCTTCACT
CTGCAGATGTTCAAGGCTATGGGTGTTGGCGGCGGCGGGAGCTTGATCGGTGGGGTCGCCGCCGTTCTAGCCGTC
ATTCCTTTTCTCTTTTCTAAATACGGCAAGCAAATCAGAGCGCGGAGCAAGTTTTCCCCCACGAAGGCGAAGCCG
GCCGCGAAAGAAGACGAGGAAGAGTTGGCTGTCATAACGGCATATGCGGCTTACGCGCAGTCCATGGAATGTCTT
CATGTTGCCGACATGCAAGCGACAGACTCTGAAGAGCAAGAGCAATGGCGAAACTTCAGTGGTGAATGGCCTTTG
AGGAGCGGAGAGACTGGCGCTTCAGGACCTGTGGACTCACCGGCGGAGAGGTGA
Gene >Hirsu2|950
ATGTACGCAGCCTCCGCGATAGCCGCGAACACCATCGCCCGCTCAGCCTGTGGCGCTGCCGCGCCGCTCTTCACT
CTGCAGATGTTCAAGGCTATGGGTGTTGGCGGCGGCGGGAGCTTGATCGGTGGGGTCGCCGCCGTTCTAGCCGTC
ATTCCTTTTCTCTTTTCTAAATACGGCAAGCAAATCAGAGCGCGGAGCAAGTTTTCCCCCACGAAGGCGAAGCCG
GCCGCGAAAGAAGACGAGGAAGAGTTGGCTGTCATAACGGCATATGCGGCTTACGCGCAGTCCATGGAATGTCTT
CATGTTGCCGACATGCAAGCGACAGACTCTGAAGAGCAAGAGCAATGGCGAAACTTCAGTGGTGAATGGCCTTTG
AGGAGCGGAGAGACTGGCGCTTCAGGACCTGTGGACTCACCGGCGGAGAGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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