Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9499
Gene name
LocationContig_697:82..594
Strand-
Gene length (bp)512
Transcript length (bp)381
Coding sequence length (bp)381
Protein length (aa) 127

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1324 0.1691 0.96 0.093 0.2296 0.0424 0.2059 0.1419 0.2522 0.0114

SignalP

SignalP signal predicted Location Score
Yes 1 - 18 0.999765

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4544
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4380
Ophiocordyceps australis map64 (Brazil) OphauB2|6384
Ophiocordyceps camponoti-floridani Ophcf2|01289
Ophiocordyceps camponoti-rufipedis Ophun1|2325
Ophiocordyceps kimflemingae Ophio5|1065
Ophiocordyceps subramaniannii Hirsu2|9499 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9499
MLTTALLLLASAVLPSVAAPADSCEAEPTAPSLPQTGTGHELPPPRPGLRLKHIALGFGIQNYTCARPGAEATST
GALAMLYDITHLGCRRGRWPATKCRSTCARGRAGTRRRAPMRTGPSRPMRR*
Coding >Hirsu2|9499
ATGTTGACGACAGCTCTCCTGCTCCTCGCCTCGGCGGTGCTGCCCTCCGTCGCCGCGCCGGCGGACAGCTGCGAA
GCCGAACCGACGGCGCCTTCGCTCCCCCAGACGGGCACCGGCCACGAGCTTCCCCCCCCGCGGCCGGGGCTGCGG
CTCAAGCACATCGCGCTCGGCTTCGGCATCCAGAACTACACGTGCGCGCGGCCCGGGGCGGAGGCGACGTCGACG
GGCGCGCTGGCCATGCTCTACGACATCACGCACCTCGGCTGCCGGCGTGGGCGCTGGCCCGCCACCAAGTGCCGC
TCAACCTGCGCCCGTGGTCGGGCTGGTACGCGTCGGCGGGCGCCGATGCGCACCGGCCCTTCCCGCCCGATGCGC
CGCTGA
Transcript >Hirsu2|9499
ATGTTGACGACAGCTCTCCTGCTCCTCGCCTCGGCGGTGCTGCCCTCCGTCGCCGCGCCGGCGGACAGCTGCGAA
GCCGAACCGACGGCGCCTTCGCTCCCCCAGACGGGCACCGGCCACGAGCTTCCCCCCCCGCGGCCGGGGCTGCGG
CTCAAGCACATCGCGCTCGGCTTCGGCATCCAGAACTACACGTGCGCGCGGCCCGGGGCGGAGGCGACGTCGACG
GGCGCGCTGGCCATGCTCTACGACATCACGCACCTCGGCTGCCGGCGTGGGCGCTGGCCCGCCACCAAGTGCCGC
TCAACCTGCGCCCGTGGTCGGGCTGGTACGCGTCGGCGGGCGCCGATGCGCACCGGCCCTTCCCGCCCGATGCGC
CGCTGA
Gene >Hirsu2|9499
ATGTTGACGACAGCTCTCCTGCTCCTCGCCTCGGCGGTGCTGCCCTCCGTCGCCGCGCCGGCGGACAGCTGCGAA
GCCGAACCGACGGCGCCTTCGCTCCCCCAGACGGGCACCGGTGAGTCTCGAAAACCCCCCCCCCCTTTCGTCGGC
AAGGGGCGGGAAGAGGGGGGAACGGCAAAAGACTGACAGGGCGGTCGCAGGCCACGAGCTTCCCCCCCCGCGGCC
GGGGCTGCGGCTCAAGCACATCGCGCTCGGCTTCGGCATCCAGAACTACACGTGCGCGCGGCCCGGGGCGGAGGC
GACGTCGACGGGCGCGCTGGCCATGCTCTACGACATCACGCACCTGTACCCGGGCCAGGGGCCCAGGGCGCTGTC
GGCCGACGACTTCGAGCGGCTGCCGGCGTGGGCGCTGGCCCGCCACCAAGTGCCGCTCAACCTGCGCCCGTGGTC
GGGCTGGTACGCGTCGGCGGGCGCCGATGCGCACCGGCCCTTCCCGCCCGATGCGCCGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail