Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|949
Gene name
LocationContig_12:12586..13586
Strand-
Gene length (bp)1000
Transcript length (bp)939
Coding sequence length (bp)939
Protein length (aa) 313

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.45

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 76 98 22
3 118 140 22
4 168 185 17
5 189 211 22
6 224 246 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|949
MSISESISSLAGNRYIQELAFYGSLYALVLGTYSRKSAPVYNQKFKKTSGYHLPLHIVTGLTEITRYQLRAAKYD
GQVLPNTFDIGLCFIWAWFGLLLTRSLRRGDPSTTRPTYQAAAIFRPVATVLAYFLQSVPLYRAGAKLINSFIYA
RSGVFIVHQSGIMRKHSYASVYALCIPISAVVAIYEADVTGAVAVYVALVMAVAQLNHHVSLRLRGCLSRPNDMI
TSCSVSDLFLLMMLVLGFADLDIMKEMQKRTSLIGDISDDYVSSRGSSMSSSSSSFPGKSQVHWGEPAPPSSSAQ
QQPQQPAMAMAS*
Coding >Hirsu2|949
ATGTCCATCTCGGAATCCATCAGCAGCCTGGCTGGGAACAGGTATATACAGGAATTGGCATTCTATGGCTCGCTC
TACGCTCTAGTTCTGGGCACGTACTCGCGGAAAAGTGCGCCCGTGTACAACCAAAAGTTCAAGAAGACGTCAGGC
TACCATCTCCCGCTTCACATCGTGACGGGTCTTACGGAGATTACGAGATACCAGCTGCGGGCGGCCAAGTATGAC
GGTCAGGTGCTACCCAATACCTTCGACATTGGCCTGTGCTTCATCTGGGCCTGGTTTGGTCTGCTGCTCACTCGC
TCTCTGCGACGAGGCGACCCGTCGACGACGCGACCGACGTACCAGGCCGCGGCCATCTTCCGTCCCGTGGCTACC
GTACTCGCATACTTCCTGCAGAGCGTCCCGCTCTACCGGGCCGGGGCGAAGCTCATCAACAGTTTCATCTACGCT
CGATCGGGTGTCTTCATCGTCCACCAGTCTGGGATCATGCGAAAGCACTCGTACGCCTCTGTCTACGCCCTGTGC
ATCCCAATTTCGGCCGTGGTCGCCATCTATGAAGCCGATGTCACGGGTGCTGTTGCTGTCTACGTCGCGCTGGTC
ATGGCTGTGGCCCAGCTTAACCACCACGTCTCGCTGCGTCTGAGGGGATGTCTGAGCCGTCCGAACGACATGATC
ACGAGCTGCTCGGTCTCTGATCTCTTCCTGCTTATGATGCTGGTGCTTGGGTTCGCCGATTTGGACATCATGAAG
GAGATGCAAAAGCGCACTTCTCTCATTGGTGACATCAGCGACGACTACGTCTCCAGCCGGGGTTCGAGCATGAGC
TCGAGCAGCAGCAGCTTCCCGGGCAAGAGTCAGGTCCACTGGGGAGAGCCAGCTCCTCCGTCGTCGTCGGCGCAA
CAGCAGCCCCAGCAGCCCGCCATGGCAATGGCCTCATAG
Transcript >Hirsu2|949
ATGTCCATCTCGGAATCCATCAGCAGCCTGGCTGGGAACAGGTATATACAGGAATTGGCATTCTATGGCTCGCTC
TACGCTCTAGTTCTGGGCACGTACTCGCGGAAAAGTGCGCCCGTGTACAACCAAAAGTTCAAGAAGACGTCAGGC
TACCATCTCCCGCTTCACATCGTGACGGGTCTTACGGAGATTACGAGATACCAGCTGCGGGCGGCCAAGTATGAC
GGTCAGGTGCTACCCAATACCTTCGACATTGGCCTGTGCTTCATCTGGGCCTGGTTTGGTCTGCTGCTCACTCGC
TCTCTGCGACGAGGCGACCCGTCGACGACGCGACCGACGTACCAGGCCGCGGCCATCTTCCGTCCCGTGGCTACC
GTACTCGCATACTTCCTGCAGAGCGTCCCGCTCTACCGGGCCGGGGCGAAGCTCATCAACAGTTTCATCTACGCT
CGATCGGGTGTCTTCATCGTCCACCAGTCTGGGATCATGCGAAAGCACTCGTACGCCTCTGTCTACGCCCTGTGC
ATCCCAATTTCGGCCGTGGTCGCCATCTATGAAGCCGATGTCACGGGTGCTGTTGCTGTCTACGTCGCGCTGGTC
ATGGCTGTGGCCCAGCTTAACCACCACGTCTCGCTGCGTCTGAGGGGATGTCTGAGCCGTCCGAACGACATGATC
ACGAGCTGCTCGGTCTCTGATCTCTTCCTGCTTATGATGCTGGTGCTTGGGTTCGCCGATTTGGACATCATGAAG
GAGATGCAAAAGCGCACTTCTCTCATTGGTGACATCAGCGACGACTACGTCTCCAGCCGGGGTTCGAGCATGAGC
TCGAGCAGCAGCAGCTTCCCGGGCAAGAGTCAGGTCCACTGGGGAGAGCCAGCTCCTCCGTCGTCGTCGGCGCAA
CAGCAGCCCCAGCAGCCCGCCATGGCAATGGCCTCATAG
Gene >Hirsu2|949
ATGTCCATCTCGGAATCCATCAGCAGCCTGGCTGGGAACAGGTATATACAGGAATTGGCATTCTATGGCTCGCTC
TACGCTCTAGTTCTGGGCACGTACTCGCGGAAAAGTGCGCCCGTGTACAACCAAAAGTTCAAGAAGACGTCAGGC
TACCATCTCCCGCTTCACATCGTGACGGGTCTTACGGAGATTACGAGATACCAGCTGCGGGCGGCCAAGTATGAC
GGTCAGGTGCTACCCAATACCTTCGACATTGGCCTGTGCTTCATCTGGGCCTGGTTTGGTCTGCTGCTCACTCGC
TCTCTGCGACGAGGCGACCCGTCGACGACGCGACCGACGTACCAGGCCGCGGCCATCTTCCGTCCCGTGGCTACC
GTACTCGCATACTTCCTGCAGAGCGTCCCGCTCTACCGGGCCGGGGCGAAGCTCATCAACAGTTTCATCTACGCT
CGATCGGGTGTCTTCATCGTCCACCAGTCTGGGATCATGCGAAAGCACTCGTACGCCTCTGTCTACGCCCTGTGC
ATCCCAATTTCGGCCGTGGTCGCCATCTATGAAGCCGATGTCACGGGTGCTGTTGCTGTCTACGTCGCGCTGGTC
ATGGCTGTGGCCCAGCTTAACCACCACGTCTCGCTGCGTCTGAGGGGATGTCTGAGCCGGTACGTTGACCCTCGC
CGTCCGGCCGCAACTGCAAACTCGTTACTGATGTCTCCATCCTAGTCCGAACGACATGATCACGAGCTGCTCGGT
CTCTGATCTCTTCCTGCTTATGATGCTGGTGCTTGGGTTCGCCGATTTGGACATCATGAAGGAGATGCAAAAGCG
CACTTCTCTCATTGGTGACATCAGCGACGACTACGTCTCCAGCCGGGGTTCGAGCATGAGCTCGAGCAGCAGCAG
CTTCCCGGGCAAGAGTCAGGTCCACTGGGGAGAGCCAGCTCCTCCGTCGTCGTCGGCGCAACAGCAGCCCCAGCA
GCCCGCCATGGCAATGGCCTCATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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