© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|9489 |
| Gene name | |
| Location | Contig_695:9110..10080 |
| Strand | - |
| Gene length (bp) | 970 |
| Transcript length (bp) | 756 |
| Coding sequence length (bp) | 756 |
| Protein length (aa) | 252 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09769 | ApoO | Apolipoprotein O | 3.1E-40 | 76 | 203 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50087|MIC26_YEAST | MICOS subunit MIC26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIC26 PE=1 SV=1 | 107 | 192 | 2.0E-12 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0061617 | MICOS complex | Yes |
| GO:0042407 | cristae formation | Yes |
| GO:0016043 | cellular component organization | No |
| GO:0007007 | inner mitochondrial membrane organization | No |
| GO:0032991 | protein-containing complex | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0006996 | organelle organization | No |
| GO:0007006 | mitochondrial membrane organization | No |
| GO:0009987 | cellular process | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0098796 | membrane protein complex | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0061024 | membrane organization | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| GO:0007005 | mitochondrion organization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 33 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 140 | 157 | 17 |
| 3 | 164 | 186 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|9489 MAARVLLQRRSVAPLAALALGGVALAPATVLAEAPTEKRKPIYDDINVPSPNRHPPAVSQLKPTPSPQPAEDEAA ARPRGPTPTDRLAVQIGRARMLLYRCAATAEDKVNGAMDSAFHLEQSFTSTVASLAPPRESGEKLMPGAIYVLVA AMAGSIVARNRNVLLRAAVPLALGFGAGWLVLPLTMRNVADLAWQYEQRAPALAEAHLKLRDGIQRSISFARVHG ELGVRYVDEKVTDARETVEGWVKQGK* |
| Coding | >Hirsu2|9489 ATGGCTGCAAGAGTGCTGCTGCAACGGCGTTCCGTCGCGCCGTTGGCCGCCCTCGCCCTCGGCGGCGTGGCTCTG GCCCCGGCCACGGTCCTGGCCGAGGCGCCGACGGAAAAGAGGAAGCCGATCTACGACGACATCAACGTGCCGTCG CCGAACCGCCACCCGCCGGCCGTGTCCCAGCTGAAGCCGACGCCGTCGCCGCAGCCCGCCGAGGACGAGGCCGCG GCCCGGCCACGGGGCCCCACGCCGACGGACCGGCTGGCGGTGCAGATCGGCCGGGCCCGCATGCTCCTGTACCGG TGCGCGGCGACGGCCGAGGACAAGGTCAACGGCGCGATGGACTCGGCCTTCCATCTCGAGCAGTCCTTCACCAGC ACGGTGGCCTCGCTGGCCCCGCCGCGCGAGAGCGGCGAGAAGCTCATGCCCGGCGCCATCTACGTCCTCGTCGCC GCCATGGCCGGCAGCATCGTCGCCCGCAACCGCAACGTCCTGCTGCGGGCCGCCGTGCCCCTCGCCCTCGGCTTC GGCGCCGGCTGGCTCGTCCTGCCCCTGACCATGCGCAACGTCGCCGACCTGGCCTGGCAGTACGAGCAGCGCGCC CCCGCCCTGGCCGAGGCCCACCTCAAGCTGCGCGACGGCATTCAGCGCAGCATCAGCTTCGCCAGGGTCCACGGC GAGCTCGGTGTACGATACGTCGACGAAAAGGTCACCGACGCTCGCGAGACCGTCGAGGGCTGGGTGAAACAGGGC AAATAG |
| Transcript | >Hirsu2|9489 ATGGCTGCAAGAGTGCTGCTGCAACGGCGTTCCGTCGCGCCGTTGGCCGCCCTCGCCCTCGGCGGCGTGGCTCTG GCCCCGGCCACGGTCCTGGCCGAGGCGCCGACGGAAAAGAGGAAGCCGATCTACGACGACATCAACGTGCCGTCG CCGAACCGCCACCCGCCGGCCGTGTCCCAGCTGAAGCCGACGCCGTCGCCGCAGCCCGCCGAGGACGAGGCCGCG GCCCGGCCACGGGGCCCCACGCCGACGGACCGGCTGGCGGTGCAGATCGGCCGGGCCCGCATGCTCCTGTACCGG TGCGCGGCGACGGCCGAGGACAAGGTCAACGGCGCGATGGACTCGGCCTTCCATCTCGAGCAGTCCTTCACCAGC ACGGTGGCCTCGCTGGCCCCGCCGCGCGAGAGCGGCGAGAAGCTCATGCCCGGCGCCATCTACGTCCTCGTCGCC GCCATGGCCGGCAGCATCGTCGCCCGCAACCGCAACGTCCTGCTGCGGGCCGCCGTGCCCCTCGCCCTCGGCTTC GGCGCCGGCTGGCTCGTCCTGCCCCTGACCATGCGCAACGTCGCCGACCTGGCCTGGCAGTACGAGCAGCGCGCC CCCGCCCTGGCCGAGGCCCACCTCAAGCTGCGCGACGGCATTCAGCGCAGCATCAGCTTCGCCAGGGTCCACGGC GAGCTCGGTGTACGATACGTCGACGAAAAGGTCACCGACGCTCGCGAGACCGTCGAGGGCTGGGTGAAACAGGGC AAATAG |
| Gene | >Hirsu2|9489 ATGGCTGCAAGAGTGCTGCTGCAACGGGTAAGGCTCCTGCCCGTCTCCCCCGGGAGCCGTCCACGCCCGGTAGAG AGCGCCTCGGAGAAGGGCTAACGAAACGGGCTCGGCTCGCCGCTCTTGCCAAACAGCGTTCCGTCGCGCCGTTGG CCGCCCTCGCCCTCGGCGGCGTGGCTCTGGCCCCGGCCACGGTCCTGGCCGAGGCGCCGACGGAAAAGGTGCGCC GCCCTCGCCCTACTCCCCGAAAACAAGCCCGAAAAGGCCGTGCTCCCATCGTCCGCCCCCGGCTGACGGCGCGGG AAACGCCAAAAAAAAAAAACAAAAACAGAGGAAGCCGATCTACGACGACATCAACGTGCCGTCGCCGAACCGCCA CCCGCCGGCCGTGTCCCAGCTGAAGCCGACGCCGTCGCCGCAGCCCGCCGAGGACGAGGCCGCGGCCCGGCCACG GGGCCCCACGCCGACGGACCGGCTGGCGGTGCAGATCGGCCGGGCCCGCATGCTCCTGTACCGGTGCGCGGCGAC GGCCGAGGACAAGGTCAACGGCGCGATGGACTCGGCCTTCCATCTCGAGCAGTCCTTCACCAGCACGGTGGCCTC GCTGGCCCCGCCGCGCGAGAGCGGCGAGAAGCTCATGCCCGGCGCCATCTACGTCCTCGTCGCCGCCATGGCCGG CAGCATCGTCGCCCGCAACCGCAACGTCCTGCTGCGGGCCGCCGTGCCCCTCGCCCTCGGCTTCGGCGCCGGCTG GCTCGTCCTGCCCCTGACCATGCGCAACGTCGCCGACCTGGCCTGGCAGTACGAGCAGCGCGCCCCCGCCCTGGC CGAGGCCCACCTCAAGCTGCGCGACGGCATTCAGCGCAGCATCAGCTTCGCCAGGGTCCACGGCGAGCTCGGTGT ACGATACGTCGACGAAAAGGTCACCGACGCTCGCGAGACCGTCGAGGGCTGGGTGAAACAGGGCAAATAG |