Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9484
Gene name
LocationContig_694:9649..10387
Strand+
Gene length (bp)738
Transcript length (bp)738
Coding sequence length (bp)738
Protein length (aa) 246

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10469 AKAP7_NLS AKAP7 2'5' RNA ligase-like domain 4.3E-27 7 227

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9484
MPARPRPTHFLCIPLCDAQLARSWASFRADVTAAPTSPLPDDAVRPLGTLHLTLGVMALPEPRDVGRAVQVLRSL
RPRATLAALRAASAAAPPLALPDGVKSAARPPPVPANADLLITLRGLRSMQAASKASVLYVPPSDPEGLLYRLCQ
QLREPFFEAGLMEDEGRPLLLHATVVNTIYAKRAAHGRRRERLLVDARDLLARYDDYVWAGASPVAKLALCKMGA
TTVEGSDGDEAYEVEAERDI*
Coding >Hirsu2|9484
ATGCCTGCGAGGCCGAGGCCGACGCACTTCCTCTGCATCCCGCTCTGCGATGCCCAGCTCGCCCGAAGCTGGGCG
TCATTCCGCGCCGACGTCACCGCCGCGCCAACGTCTCCGCTCCCCGACGACGCCGTCAGGCCACTGGGAACGCTG
CACCTGACGCTGGGCGTCATGGCCCTGCCGGAGCCGCGCGACGTGGGCCGCGCCGTGCAGGTGCTCAGGAGCCTG
CGCCCGAGAGCGACTCTGGCCGCCCTGAGGGCAGCGTCCGCGGCCGCTCCGCCTCTCGCCCTGCCCGACGGCGTG
AAGTCGGCCGCCCGACCTCCTCCCGTGCCGGCCAACGCCGATCTGCTGATCACGCTCCGCGGCTTGCGCTCGATG
CAGGCCGCCTCCAAGGCCTCGGTCCTGTACGTGCCCCCGAGCGACCCGGAAGGCCTCCTCTATCGCCTCTGCCAG
CAACTACGCGAGCCCTTCTTCGAGGCTGGTCTAATGGAGGACGAGGGGCGGCCACTGCTGCTCCACGCCACAGTC
GTCAACACGATATACGCCAAGCGCGCCGCCCACGGAAGAAGACGCGAGAGACTGTTGGTTGATGCGCGGGACCTG
CTCGCCCGCTACGATGATTATGTGTGGGCCGGTGCCTCGCCGGTCGCCAAGCTGGCGCTATGCAAGATGGGCGCC
ACGACGGTCGAGGGCAGCGACGGCGACGAGGCATACGAGGTGGAGGCCGAGAGGGACATCTAA
Transcript >Hirsu2|9484
ATGCCTGCGAGGCCGAGGCCGACGCACTTCCTCTGCATCCCGCTCTGCGATGCCCAGCTCGCCCGAAGCTGGGCG
TCATTCCGCGCCGACGTCACCGCCGCGCCAACGTCTCCGCTCCCCGACGACGCCGTCAGGCCACTGGGAACGCTG
CACCTGACGCTGGGCGTCATGGCCCTGCCGGAGCCGCGCGACGTGGGCCGCGCCGTGCAGGTGCTCAGGAGCCTG
CGCCCGAGAGCGACTCTGGCCGCCCTGAGGGCAGCGTCCGCGGCCGCTCCGCCTCTCGCCCTGCCCGACGGCGTG
AAGTCGGCCGCCCGACCTCCTCCCGTGCCGGCCAACGCCGATCTGCTGATCACGCTCCGCGGCTTGCGCTCGATG
CAGGCCGCCTCCAAGGCCTCGGTCCTGTACGTGCCCCCGAGCGACCCGGAAGGCCTCCTCTATCGCCTCTGCCAG
CAACTACGCGAGCCCTTCTTCGAGGCTGGTCTAATGGAGGACGAGGGGCGGCCACTGCTGCTCCACGCCACAGTC
GTCAACACGATATACGCCAAGCGCGCCGCCCACGGAAGAAGACGCGAGAGACTGTTGGTTGATGCGCGGGACCTG
CTCGCCCGCTACGATGATTATGTGTGGGCCGGTGCCTCGCCGGTCGCCAAGCTGGCGCTATGCAAGATGGGCGCC
ACGACGGTCGAGGGCAGCGACGGCGACGAGGCATACGAGGTGGAGGCCGAGAGGGACATCTAA
Gene >Hirsu2|9484
ATGCCTGCGAGGCCGAGGCCGACGCACTTCCTCTGCATCCCGCTCTGCGATGCCCAGCTCGCCCGAAGCTGGGCG
TCATTCCGCGCCGACGTCACCGCCGCGCCAACGTCTCCGCTCCCCGACGACGCCGTCAGGCCACTGGGAACGCTG
CACCTGACGCTGGGCGTCATGGCCCTGCCGGAGCCGCGCGACGTGGGCCGCGCCGTGCAGGTGCTCAGGAGCCTG
CGCCCGAGAGCGACTCTGGCCGCCCTGAGGGCAGCGTCCGCGGCCGCTCCGCCTCTCGCCCTGCCCGACGGCGTG
AAGTCGGCCGCCCGACCTCCTCCCGTGCCGGCCAACGCCGATCTGCTGATCACGCTCCGCGGCTTGCGCTCGATG
CAGGCCGCCTCCAAGGCCTCGGTCCTGTACGTGCCCCCGAGCGACCCGGAAGGCCTCCTCTATCGCCTCTGCCAG
CAACTACGCGAGCCCTTCTTCGAGGCTGGTCTAATGGAGGACGAGGGGCGGCCACTGCTGCTCCACGCCACAGTC
GTCAACACGATATACGCCAAGCGCGCCGCCCACGGAAGAAGACGCGAGAGACTGTTGGTTGATGCGCGGGACCTG
CTCGCCCGCTACGATGATTATGTGTGGGCCGGTGCCTCGCCGGTCGCCAAGCTGGCGCTATGCAAGATGGGCGCC
ACGACGGTCGAGGGCAGCGACGGCGACGAGGCATACGAGGTGGAGGCCGAGAGGGACATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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