Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|9457
Gene name
LocationContig_69:36502..37554
Strand+
Gene length (bp)1052
Transcript length (bp)993
Coding sequence length (bp)993
Protein length (aa) 331

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07929 PRiA4_ORF3 Plasmid pRiA4b ORF-3-like protein 1.6E-27 73 279
PF01753 zf-MYND MYND finger 9.1E-10 15 55

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|9457
MNSQDNNMKCGNGGCSKPAAPADSASLRRCSRCRRAAYCSRECQTAAWPAHKGGCVRPNYIVKFHLAPAEITGPA
VTRTLSCPANAVFYMLHMALQTAFGWATTHSFDFAVLDPDYREPDNIMDVMSRQMAARHPSGMGLSASAPREYMF
RVVDPVEQTVFSGIDRMHEGIRCHPRTAEKKADSYKLWQLFDDEQYQDHQILYTYDFGDNWEHHLTVMGRANPTT
SFVCLDGSGHGVAEDCAGVNGWQELKAAYRAKKPSEKQLERRRWLETQASNADPRGLAGDRVHAWDRDKVNRDLD
SEKMFDRFERMGDAAAAFQDRAATTYRLGK*
Coding >Hirsu2|9457
ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG
TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG
CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC
GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC
TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC
ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC
CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG
CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGATCACCAG
ATCCTCTACACCTACGACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACC
AGCTTCGTCTGCCTCGACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTC
AAGGCGGCCTACCGGGCCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGC
AACGCGGACCCGCGGGGGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGAC
TCGGAAAAGATGTTTGATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACG
TATCGGCTTGGGAAATAA
Transcript >Hirsu2|9457
ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG
TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG
CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC
GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC
TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC
ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC
CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG
CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGATCACCAG
ATCCTCTACACCTACGACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACC
AGCTTCGTCTGCCTCGACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTC
AAGGCGGCCTACCGGGCCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGC
AACGCGGACCCGCGGGGGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGAC
TCGGAAAAGATGTTTGATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACG
TATCGGCTTGGGAAATAA
Gene >Hirsu2|9457
ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG
TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG
CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC
GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC
TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC
ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC
CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG
CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGGTATGTGT
GTCTTGTCCAGATATCGGGCCGAGTCTACCGTACTGACGCTTGGAACTCAGATCACCAGATCCTCTACACCTACG
ACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACCAGCTTCGTCTGCCTCG
ACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTCAAGGCGGCCTACCGGG
CCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGCAACGCGGACCCGCGGG
GGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGACTCGGAAAAGATGTTTG
ATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACGTATCGGCTTGGGAAAT
AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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