Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|9457
Gene name
Location	Contig_69:36502..37554
Strand	+
Gene length (bp)	1052
Transcript length (bp)	993
Coding sequence length (bp)	993
Protein length (aa)	331

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF07929	PRiA4_ORF3	Plasmid pRiA4b ORF-3-like protein	1.6E-27	73	279
PF01753	zf-MYND	MYND finger	9.1E-10	15	55

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 45	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|9457 MNSQDNNMKCGNGGCSKPAAPADSASLRRCSRCRRAAYCSRECQTAAWPAHKGGCVRPNYIVKFHLAPAEITGPA VTRTLSCPANAVFYMLHMALQTAFGWATTHSFDFAVLDPDYREPDNIMDVMSRQMAARHPSGMGLSASAPREYMF RVVDPVEQTVFSGIDRMHEGIRCHPRTAEKKADSYKLWQLFDDEQYQDHQILYTYDFGDNWEHHLTVMGRANPTT SFVCLDGSGHGVAEDCAGVNGWQELKAAYRAKKPSEKQLERRRWLETQASNADPRGLAGDRVHAWDRDKVNRDLD SEKMFDRFERMGDAAAAFQDRAATTYRLGK*
Coding	>Hirsu2\|9457 ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGATCACCAG ATCCTCTACACCTACGACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACC AGCTTCGTCTGCCTCGACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTC AAGGCGGCCTACCGGGCCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGC AACGCGGACCCGCGGGGGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGAC TCGGAAAAGATGTTTGATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACG TATCGGCTTGGGAAATAA
Transcript	>Hirsu2\|9457 ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGATCACCAG ATCCTCTACACCTACGACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACC AGCTTCGTCTGCCTCGACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTC AAGGCGGCCTACCGGGCCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGC AACGCGGACCCGCGGGGGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGAC TCGGAAAAGATGTTTGATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACG TATCGGCTTGGGAAATAA
Gene	>Hirsu2\|9457 ATGAACTCCCAAGACAACAACATGAAGTGCGGCAACGGCGGCTGCTCCAAGCCGGCAGCCCCGGCCGACTCGGCG TCCCTCCGGCGCTGCTCCCGATGCCGGCGGGCGGCGTACTGCTCGCGCGAGTGCCAGACGGCGGCTTGGCCGGCG CACAAGGGCGGCTGCGTGCGGCCCAACTATATCGTCAAGTTCCACCTGGCGCCGGCGGAGATCACGGGCCCGGCC GTGACGCGGACGCTGAGCTGCCCGGCCAACGCCGTCTTCTACATGCTGCACATGGCGCTGCAGACGGCCTTCGGC TGGGCCACGACCCACTCCTTCGACTTCGCCGTCCTGGACCCCGACTACCGCGAGCCGGACAACATCATGGACGTC ATGAGCAGGCAGATGGCCGCCAGGCACCCCTCGGGCATGGGGCTTTCCGCCTCGGCCCCGCGGGAGTACATGTTC CGCGTCGTCGACCCGGTCGAGCAGACCGTCTTCTCCGGCATCGACCGCATGCACGAGGGCATCAGATGCCATCCG CGGACGGCGGAGAAGAAGGCCGACAGCTACAAGCTGTGGCAGCTGTTCGACGACGAGCAGTATCAGGGTATGTGT GTCTTGTCCAGATATCGGGCCGAGTCTACCGTACTGACGCTTGGAACTCAGATCACCAGATCCTCTACACCTACG ACTTTGGCGACAACTGGGAGCATCATCTCACCGTTATGGGACGAGCCAACCCCACCACCAGCTTCGTCTGCCTCG ACGGGTCGGGTCACGGCGTGGCCGAGGACTGCGCCGGCGTCAACGGATGGCAGGAGCTCAAGGCGGCCTACCGGG CCAAGAAGCCGAGCGAGAAGCAGCTGGAGCGGCGCCGCTGGCTCGAGACGCAGGCCAGCAACGCGGACCCGCGGG GGCTGGCGGGCGATCGCGTGCACGCGTGGGATCGAGACAAGGTCAACCGCGACCTCGACTCGGAAAAGATGTTTG ATCGCTTCGAGAGGATGGGAGACGCCGCCGCAGCTTTCCAGGATCGTGCTGCTACAACGTATCGGCTTGGGAAAT AA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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